RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 BMS1Q14692 1282 aaKnown RBP5.54□□□□□ -1.52
RC3H1-201ENST00000258349 MPNDQ8N594 471 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 SLC12A7Q9Y666 1083 aa5.54□□□□□ -1.52
RC3H1-201ENST00000258349 GOLGA8BA8MQT2 603 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 CTAGE1Q96RT6 745 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 ZNF652Q9Y2D9 606 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 CCDC12Q8WUD4 166 aaPredicted RBP5.53□□□□□ -1.52
RC3H1-201ENST00000258349 HYPKQ9NX55 129 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 CATIPQ7Z7H3 387 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 RNF41Q9H4P4 317 aaPredicted RBP5.53□□□□□ -1.52
RC3H1-201ENST00000258349 CEP126Q9P2H0 1117 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 AMPD3Q01432 767 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 PRDM10Q9NQV6 1147 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 ZSCAN23Q3MJ62 389 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 SMARCC1Q92922 1105 aaPredicted RBP5.53□□□□□ -1.52
RC3H1-201ENST00000258349 CTAGE9A4FU28 777 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 CCDC172P0C7W6 258 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 KIF5BP33176 963 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 ESCO1Q5FWF5 840 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 ZSCAN16Q9H4T2 348 aaPredicted RBP5.53□□□□□ -1.52
RC3H1-201ENST00000258349 TTC21AQ8NDW8 1320 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 MPHOSPH10O00566 681 aaKnown RBP5.53□□□□□ -1.52
RC3H1-201ENST00000258349 STX6O43752 255 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 XPCQ01831 940 aaPredicted RBP5.53□□□□□ -1.52
RC3H1-201ENST00000258349 KLHL10Q6JEL2 608 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 TMC6Q7Z403 805 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 RMND1Q9NWS8 449 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 FSIP1Q8NA03 581 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 CNNM3Q8NE01 707 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 BCCIPQ9P287 314 aaKnown RBP eCLIP5.53□□□□□ -1.52
RC3H1-201ENST00000258349 TICAM2Q86XR7 235 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 OSCARQ8IYS5 282 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 CROCC2H7BZ55 1655 aa5.53□□□□□ -1.52
RC3H1-201ENST00000258349 HS1BP3Q53T59 392 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 SLF2Q8IX21 1173 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 CFAP57Q96MR6 1250 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 SRRTQ9BXP5 876 aaKnown RBP5.52□□□□□ -1.53
RC3H1-201ENST00000258349 ABCA5Q8WWZ7 1642 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 SPHKAPQ2M3C7 1700 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 URI1O94763 535 aaPredicted RBP5.52□□□□□ -1.53
RC3H1-201ENST00000258349 HSPA4P34932 840 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 TTF1Q15361 905 aaPredicted RBP5.52□□□□□ -1.53
RC3H1-201ENST00000258349 BMP2KLQ5H9B9 411 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 PRPF40BQ6NWY9 871 aaKnown RBP5.52□□□□□ -1.53
RC3H1-201ENST00000258349 ARFGAP3Q9NP61 516 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 TTC21BQ7Z4L5 1316 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 FSD2A1L4K1 749 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 LARP1Q6PKG0 1096 aaKnown RBP5.52□□□□□ -1.53
RC3H1-201ENST00000258349 CUL5Q93034 780 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 EVI5LQ96CN4 794 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 NAPBQ9H115 298 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 GOLGA4Q13439 2230 aaKnown RBP5.52□□□□□ -1.53
RC3H1-201ENST00000258349 ITSN1Q15811 1721 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 FERMT1Q9BQL6 677 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 LRRC27Q9C0I9 530 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.52□□□□□ -1.533e-6■□□□□ 11.1
RC3H1-201ENST00000258349 STARD3NLO95772 234 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 RBM5P52756 815 aaKnown RBP eCLIP5.52□□□□□ -1.53
RC3H1-201ENST00000258349 PIP4K2BP78356 416 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 STXBP4Q6ZWJ1 553 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 TBC1D5Q92609 795 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 PLVAPQ9BX97 442 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 TBC1D2Q9BYX2 928 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 PRKCSHP14314 528 aaPredicted RBP5.52□□□□□ -1.53
RC3H1-201ENST00000258349 RARSP54136 660 aaKnown RBP5.52□□□□□ -1.53
RC3H1-201ENST00000258349 CFAP70Q5T0N1 1121 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 MSL1Q68DK7 614 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 DNAAF4Q8WXU2 420 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 IKBKGQ9Y6K9 419 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 MAATS1Q7Z4T9 603 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 CTCFLQ8NI51 663 aaPredicted RBP5.52□□□□□ -1.53
RC3H1-201ENST00000258349 CALML4Q96GE6 196 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 RBM42Q9BTD8 480 aaKnown RBP5.52□□□□□ -1.53
RC3H1-201ENST00000258349 CABP1Q9NZU7 370 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 CDC42BPBQ9Y5S2 1711 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 TBC1D32Q96NH3 1257 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 GTPBP4Q9BZE4 634 aaKnown RBP5.52□□□□□ -1.53
RC3H1-201ENST00000258349 TSGA10Q9BZW7 698 aa5.52□□□□□ -1.53
RC3H1-201ENST00000258349 SLC5A1P13866 664 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 HLTFQ14527 1009 aaKnown RBP eCLIP5.51□□□□□ -1.533e-8■□□□□ 8.1
RC3H1-201ENST00000258349 KLHL40Q2TBA0 621 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 CTNNBL1Q8WYA6 563 aaPredicted RBP5.51□□□□□ -1.53
RC3H1-201ENST00000258349 LMAN1P49257 510 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 DUSP27Q5VZP5 1158 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 TBC1D9Q6ZT07 1266 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 CCDC155Q8N6L0 562 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 IL16Q14005 1332 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 METTL24Q5JXM2 366 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 KIAA0586Q9BVV6 1533 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 UBE4AQ14139 1066 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 SELENOOQ9BVL4 669 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 JADE2Q9NQC1 790 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 EIF4G3O43432 1585 aaKnown RBP5.51□□□□□ -1.53
RC3H1-201ENST00000258349 PRPHP41219 470 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 CAVIN4Q5BKX8 364 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 LRSAM1Q6UWE0 723 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 PIK3R4Q99570 1358 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 GTF2F1P35269 517 aaKnown RBP eCLIP5.51□□□□□ -1.53
RC3H1-201ENST00000258349 FAM69CQ0P6D2 419 aa5.51□□□□□ -1.53
RC3H1-201ENST00000258349 MAP3K12Q12852 859 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms