RNA–Protein interactions for RNA: ENST00000257765.9

KHDC1-201, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KHDC1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-201ENST00000257765 RTF1Q92541 710 aaKnown RBP24.69■■□□□ 1.54
KHDC1-201ENST00000257765 USP16Q9Y5T5 823 aa24.69■■□□□ 1.54
KHDC1-201ENST00000257765 PIP4K2AP48426 406 aaPredicted RBP24.67■■□□□ 1.54
KHDC1-201ENST00000257765 DPY19L2Q6NUT2 758 aa24.67■■□□□ 1.54
KHDC1-201ENST00000257765 CNKSR1Q969H4 720 aa24.67■■□□□ 1.54
KHDC1-201ENST00000257765 LAMB4A4D0S4 1761 aa24.67■■□□□ 1.54
KHDC1-201ENST00000257765 LTBP3Q9NS15 1303 aa24.66■■□□□ 1.54
KHDC1-201ENST00000257765 PRAMEF22A3QJZ6 481 aa24.66■■□□□ 1.54
KHDC1-201ENST00000257765 SNRPA1P09661 255 aaKnown RBP24.66■■□□□ 1.54
KHDC1-201ENST00000257765 PPP2R1AP30153 589 aa24.66■■□□□ 1.54
KHDC1-201ENST00000257765 ERFEQ4G0M1 354 aa24.66■■□□□ 1.54
KHDC1-201ENST00000257765 STYK1Q6J9G0 422 aa24.66■■□□□ 1.54
KHDC1-201ENST00000257765 MCM10Q7L590 875 aa24.66■■□□□ 1.54
KHDC1-201ENST00000257765 TAOK3Q9H2K8 898 aa24.66■■□□□ 1.54
KHDC1-201ENST00000257765 SRGNP10124 158 aa24.65■■□□□ 1.54
KHDC1-201ENST00000257765 ZNF652Q9Y2D9 606 aa24.65■■□□□ 1.54
KHDC1-201ENST00000257765 PRPF40BQ6NWY9 871 aaKnown RBP24.64■■□□□ 1.54
KHDC1-201ENST00000257765 CLEC4GQ6UXB4 293 aa24.64■■□□□ 1.54
KHDC1-201ENST00000257765 MASTLQ96GX5 879 aa24.64■■□□□ 1.54
KHDC1-201ENST00000257765 POTECB2RU33 542 aa24.63■■□□□ 1.53
KHDC1-201ENST00000257765 SOGA3Q5TF21 947 aa24.63■■□□□ 1.53
KHDC1-201ENST00000257765 NBPF5PQ86XG9 351 aaPredicted RBP24.63■■□□□ 1.53
KHDC1-201ENST00000257765 DLG5Q8TDM6 1919 aa24.63■■□□□ 1.53
KHDC1-201ENST00000257765 HTATSF1O43719 755 aaKnown RBP24.61■■□□□ 1.53
KHDC1-201ENST00000257765 DCTN1Q14203 1278 aa24.61■■□□□ 1.53
KHDC1-201ENST00000257765 KDM3BQ7LBC6 1761 aa24.59■■□□□ 1.53
KHDC1-201ENST00000257765 NBPF26B4DH59 902 aa24.58■■□□□ 1.53
KHDC1-201ENST00000257765 RGL2O15211 777 aa24.58■■□□□ 1.53
KHDC1-201ENST00000257765 NBPF10Q6P3W6 841 aaKnown RBP24.58■■□□□ 1.53
KHDC1-201ENST00000257765 NBPF15Q8N660 670 aa24.58■■□□□ 1.53
KHDC1-201ENST00000257765 NIP7Q9Y221 180 aaKnown RBP eCLIP24.58■■□□□ 1.53
KHDC1-201ENST00000257765 NPR1P16066 1061 aa24.56■■□□□ 1.52
KHDC1-201ENST00000257765 TAF7Q15545 349 aaPredicted RBP24.56■■□□□ 1.52
KHDC1-201ENST00000257765 CCDC93Q567U6 631 aa24.56■■□□□ 1.52
KHDC1-201ENST00000257765 SCN4AP35499 1836 aa24.56■■□□□ 1.52
KHDC1-201ENST00000257765 DDNO94850 711 aaPredicted RBP24.55■■□□□ 1.52
KHDC1-201ENST00000257765 TPTE2Q6XPS3 522 aa24.55■■□□□ 1.52
KHDC1-201ENST00000257765 KLRG2A4D1S0 409 aaPredicted RBP24.54■■□□□ 1.52
KHDC1-201ENST00000257765 C7orf43Q8WVR3 580 aa24.54■■□□□ 1.52
KHDC1-201ENST00000257765 NUP98P52948 1817 aa24.54■■□□□ 1.52
KHDC1-201ENST00000257765 NEFMP07197 916 aa24.53■■□□□ 1.52
KHDC1-201ENST00000257765 COL13A1Q5TAT6 717 aaPredicted RBP24.53■■□□□ 1.52
KHDC1-201ENST00000257765 CHADLQ6NUI6 762 aa24.53■■□□□ 1.52
KHDC1-201ENST00000257765 FAM177BA6PVY3 158 aa24.52■■□□□ 1.52
KHDC1-201ENST00000257765 FKBP4Q02790 459 aaKnown RBP eCLIP24.51■■□□□ 1.51
KHDC1-201ENST00000257765 HLFQ16534 295 aa24.51■■□□□ 1.51
KHDC1-201ENST00000257765 MIS18AQ9NYP9 233 aa24.51■■□□□ 1.51
KHDC1-201ENST00000257765 IQCA1LA6NCM1 817 aa24.5■■□□□ 1.51
KHDC1-201ENST00000257765 PNISRQ8TF01 805 aaKnown RBP24.5■■□□□ 1.51
KHDC1-201ENST00000257765 PCNTO95613 3336 aa24.5■■□□□ 1.51
KHDC1-201ENST00000257765 POTEIP0CG38 1075 aa24.49■■□□□ 1.51
KHDC1-201ENST00000257765 POTEJP0CG39 1038 aa24.49■■□□□ 1.51
KHDC1-201ENST00000257765 HSPA1AP0DMV8 641 aaKnown RBP24.49■■□□□ 1.51
KHDC1-201ENST00000257765 HSPA1BP0DMV9 641 aaKnown RBP24.49■■□□□ 1.51
KHDC1-201ENST00000257765 GTF2E1P29083 439 aaPredicted RBP24.49■■□□□ 1.51
KHDC1-201ENST00000257765 L3MBTL3Q96JM7 780 aaPredicted RBP24.49■■□□□ 1.51
KHDC1-201ENST00000257765 ZNF277Q9NRM2 450 aaPredicted RBP24.48■■□□□ 1.51
KHDC1-201ENST00000257765 ALDH1B1P30837 517 aa24.47■■□□□ 1.51
KHDC1-201ENST00000257765 RTKN2Q8IZC4 609 aa24.47■■□□□ 1.51
KHDC1-201ENST00000257765 CREBZFQ9NS37 354 aa24.47■■□□□ 1.51
KHDC1-201ENST00000257765 ABCC12Q96J65 1359 aa24.46■■□□□ 1.51
KHDC1-201ENST00000257765 ZNF541Q9H0D2 1346 aa24.46■■□□□ 1.51
KHDC1-201ENST00000257765 OLFM4Q6UX06 510 aa24.46■■□□□ 1.51
KHDC1-201ENST00000257765 NGEFQ8N5V2 710 aa24.46■■□□□ 1.51
KHDC1-201ENST00000257765 NYXQ9GZU5 481 aa24.46■■□□□ 1.51
KHDC1-201ENST00000257765 MAP3K15Q6ZN16 1313 aa24.45■■□□□ 1.5
KHDC1-201ENST00000257765 ERVV-1B6SEH8 477 aa24.45■■□□□ 1.5
KHDC1-201ENST00000257765 LDHDQ86WU2 507 aa24.45■■□□□ 1.5
KHDC1-201ENST00000257765 TAF1DQ9H5J8 278 aaPredicted RBP24.45■■□□□ 1.5
KHDC1-201ENST00000257765 EIF4A1P60842 406 aaKnown RBP24.44■■□□□ 1.5
KHDC1-201ENST00000257765 NFE2L2Q16236 605 aa24.44■■□□□ 1.5
KHDC1-201ENST00000257765 KIF6Q6ZMV9 814 aa24.44■■□□□ 1.5
KHDC1-201ENST00000257765 TNS4Q8IZW8 715 aa24.44■■□□□ 1.5
KHDC1-201ENST00000257765 PLEKHF1Q96S99 279 aa24.44■■□□□ 1.5
KHDC1-201ENST00000257765 IARSP41252 1262 aaKnown RBP24.43■■□□□ 1.5
KHDC1-201ENST00000257765 NUTM1Q86Y26 1132 aa24.43■■□□□ 1.5
KHDC1-201ENST00000257765 RRP7AQ9Y3A4 280 aaKnown RBP24.43■■□□□ 1.5
KHDC1-201ENST00000257765 ADAMTSL1Q8N6G6 1762 aa24.43■■□□□ 1.5
KHDC1-201ENST00000257765 RIC1Q4ADV7 1423 aa24.43■■□□□ 1.5
KHDC1-201ENST00000257765 SNED1Q8TER0 1413 aa24.43■■□□□ 1.5
KHDC1-201ENST00000257765 IBTKQ9P2D0 1353 aaPredicted RBP24.42■■□□□ 1.5
KHDC1-201ENST00000257765 CRY2Q49AN0 593 aa24.42■■□□□ 1.5
KHDC1-201ENST00000257765 THUMPD2Q9BTF0 503 aaKnown RBP24.42■■□□□ 1.5
KHDC1-201ENST00000257765 MKRN1Q9UHC7 482 aaKnown RBP24.42■■□□□ 1.5
KHDC1-201ENST00000257765 PASKQ96RG2 1323 aa24.41■■□□□ 1.5
KHDC1-201ENST00000257765 MAPK8IP3Q9UPT6 1336 aa24.41■■□□□ 1.5
KHDC1-201ENST00000257765 MYL6BP14649 208 aa24.41■■□□□ 1.5
KHDC1-201ENST00000257765 TTLL7Q6ZT98 887 aa24.41■■□□□ 1.5
KHDC1-201ENST00000257765 SYNE4Q8N205 404 aa24.41■■□□□ 1.5
KHDC1-201ENST00000257765 HACL1Q9UJ83 578 aa24.41■■□□□ 1.5
KHDC1-201ENST00000257765 PNNQ9H307 717 aaKnown RBP24.4■■□□□ 1.5
KHDC1-201ENST00000257765 GPTP24298 496 aa24.39■■□□□ 1.49
KHDC1-201ENST00000257765 EAPPQ56P03 285 aaPredicted RBP24.39■■□□□ 1.49
KHDC1-201ENST00000257765 RPGRQ92834 1020 aaKnown RBP24.39■■□□□ 1.49
KHDC1-201ENST00000257765 PSMD1Q99460 953 aa24.39■■□□□ 1.49
KHDC1-201ENST00000257765 ZBTB3Q9H5J0 574 aa24.39■■□□□ 1.49
KHDC1-201ENST00000257765 ERBB4Q15303 1308 aa24.38■■□□□ 1.49
KHDC1-201ENST00000257765 UBN2Q6ZU65 1347 aa24.38■■□□□ 1.49
KHDC1-201ENST00000257765 FZD9O00144 591 aa24.38■■□□□ 1.49
KHDC1-201ENST00000257765 CC2D2BQ6DHV5 1058 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms