RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 KLHL40Q2TBA0 621 aa20.09■□□□□ 0.81
UBQLN1-201ENST00000257468 LMBRD1Q9NUN5 540 aa20.09■□□□□ 0.81
UBQLN1-201ENST00000257468 IGKV5-2P06315 115 aa20.09■□□□□ 0.81
UBQLN1-201ENST00000257468 CLASRPQ8N2M8 674 aaKnown RBP20.09■□□□□ 0.81
UBQLN1-201ENST00000257468 FAM43AQ8N2R8 423 aa20.09■□□□□ 0.81
UBQLN1-201ENST00000257468 SPG7Q9UQ90 795 aa20.09■□□□□ 0.81
UBQLN1-201ENST00000257468 CRYBG1Q9Y4K1 1723 aa20.08■□□□□ 0.81
UBQLN1-201ENST00000257468 ZNF496Q96IT1 587 aaPredicted RBP20.08■□□□□ 0.81
UBQLN1-201ENST00000257468 COL18A1P39060 1754 aa20.08■□□□□ 0.81
UBQLN1-201ENST00000257468 RAD50Q92878 1312 aa20.08■□□□□ 0.8
UBQLN1-201ENST00000257468 USP42Q9H9J4 1324 aaKnown RBP20.08■□□□□ 0.8
UBQLN1-201ENST00000257468 DDX58O95786 925 aaKnown RBP20.07■□□□□ 0.8
UBQLN1-201ENST00000257468 NCLP19338 710 aaKnown RBP20.07■□□□□ 0.8
UBQLN1-201ENST00000257468 RIC3Q7Z5B4 369 aa20.07■□□□□ 0.8
UBQLN1-201ENST00000257468 LSG1Q9H089 658 aaKnown RBP20.07■□□□□ 0.8
UBQLN1-201ENST00000257468 LMTK3Q96Q04 1460 aa20.07■□□□□ 0.8
UBQLN1-201ENST00000257468 MCM2P49736 904 aa20.07■□□□□ 0.8
UBQLN1-201ENST00000257468 CUL4AQ13619 759 aa20.07■□□□□ 0.8
UBQLN1-201ENST00000257468 XAGE3Q8WTP9 111 aa20.07■□□□□ 0.8
UBQLN1-201ENST00000257468 RRAGDQ9NQL2 400 aaPredicted RBP20.07■□□□□ 0.8
UBQLN1-201ENST00000257468 TTC41PQ6P2S7 1318 aa20.07■□□□□ 0.8
UBQLN1-201ENST00000257468 GLRX3O76003 335 aaKnown RBP20.06■□□□□ 0.8
UBQLN1-201ENST00000257468 KLHDC4Q8TBB5 520 aa20.06■□□□□ 0.8
UBQLN1-201ENST00000257468 PRPF40AO75400 957 aaKnown RBP20.06■□□□□ 0.8
UBQLN1-201ENST00000257468 AACSQ86V21 672 aa20.06■□□□□ 0.8
UBQLN1-201ENST00000257468 RASEFQ8IZ41 740 aa20.06■□□□□ 0.8
UBQLN1-201ENST00000257468 IL17RAQ96F46 866 aa20.06■□□□□ 0.8
UBQLN1-201ENST00000257468 SIL1Q9H173 461 aa20.06■□□□□ 0.8
UBQLN1-201ENST00000257468 CYP27B1O15528 508 aa20.05■□□□□ 0.8
UBQLN1-201ENST00000257468 SASH1O94885 1247 aa20.05■□□□□ 0.8
UBQLN1-201ENST00000257468 IFIT2P09913 472 aaKnown RBP20.05■□□□□ 0.8
UBQLN1-201ENST00000257468 COPS6Q7L5N1 327 aa20.05■□□□□ 0.8
UBQLN1-201ENST00000257468 JARID2Q92833 1246 aaPredicted RBP20.05■□□□□ 0.8
UBQLN1-201ENST00000257468 ECHDC1Q9NTX5 307 aa20.05■□□□□ 0.8
UBQLN1-201ENST00000257468 SNX14Q9Y5W7 946 aa20.05■□□□□ 0.8
UBQLN1-201ENST00000257468 CAVIN1Q6NZI2 390 aaKnown RBP20.05■□□□□ 0.8
UBQLN1-201ENST00000257468 USP16Q9Y5T5 823 aa20.05■□□□□ 0.8
UBQLN1-201ENST00000257468 UTYO14607 1347 aa20.05■□□□□ 0.8
UBQLN1-201ENST00000257468 IFNL2Q8IZJ0 200 aa20.04■□□□□ 0.8
UBQLN1-201ENST00000257468 MYD88Q99836 296 aa20.04■□□□□ 0.8
UBQLN1-201ENST00000257468 LARP6Q9BRS8 491 aaKnown RBP20.04■□□□□ 0.8
UBQLN1-201ENST00000257468 TLR7Q9NYK1 1049 aaKnown RBP20.04■□□□□ 0.8
UBQLN1-201ENST00000257468 ISY1Q9ULR0 285 aaKnown RBP20.04■□□□□ 0.8
UBQLN1-201ENST00000257468 TNS3Q68CZ2 1445 aa20.03■□□□□ 0.8
UBQLN1-201ENST00000257468 STRCQ7RTU9 1775 aa20.03■□□□□ 0.8
UBQLN1-201ENST00000257468 NEURL1BA8MQ27 555 aa20.03■□□□□ 0.8
UBQLN1-201ENST00000257468 EPHA10Q5JZY3 1008 aa20.03■□□□□ 0.8
UBQLN1-201ENST00000257468 EAF2Q96CJ1 260 aaPredicted RBP20.03■□□□□ 0.8
UBQLN1-201ENST00000257468 CCDC8Q9H0W5 538 aaPredicted RBP20.03■□□□□ 0.8
UBQLN1-201ENST00000257468 DIAPH3Q9NSV4 1193 aa20.03■□□□□ 0.8
UBQLN1-201ENST00000257468 CPA1P15085 419 aa20.02■□□□□ 0.8
UBQLN1-201ENST00000257468 GPT2Q8TD30 523 aa20.02■□□□□ 0.8
UBQLN1-201ENST00000257468 KDM4FA0A1W2PPD8 638 aa20.02■□□□□ 0.8
UBQLN1-201ENST00000257468 PTH1RQ03431 593 aa20.02■□□□□ 0.8
UBQLN1-201ENST00000257468 LARP1Q6PKG0 1096 aaKnown RBP20.02■□□□□ 0.8
UBQLN1-201ENST00000257468 ERC1Q8IUD2 1116 aa20.02■□□□□ 0.8
UBQLN1-201ENST00000257468 RBM27Q9P2N5 1060 aaKnown RBP20.02■□□□□ 0.8
UBQLN1-201ENST00000257468 KIAA1211Q6ZU35 1233 aa20.01■□□□□ 0.79
UBQLN1-201ENST00000257468 BRD1O95696 1058 aa20.01■□□□□ 0.79
UBQLN1-201ENST00000257468 G3BP1Q13283 466 aaKnown RBP eCLIP20.01■□□□□ 0.796e-6■□□□□ 9.2
UBQLN1-201ENST00000257468 GCKRQ14397 625 aa20.01■□□□□ 0.79
UBQLN1-201ENST00000257468 TTC5Q8N0Z6 440 aa20.01■□□□□ 0.79
UBQLN1-201ENST00000257468 XIRP1Q702N8 1843 aaKnown RBP20■□□□□ 0.79
UBQLN1-201ENST00000257468 EPB41L2O43491 1005 aaKnown RBP20■□□□□ 0.79
UBQLN1-201ENST00000257468 HSPA2P54652 639 aa20■□□□□ 0.79
UBQLN1-201ENST00000257468 NEXNQ0ZGT2 675 aa20■□□□□ 0.79
UBQLN1-201ENST00000257468 FOXD4L6Q3SYB3 417 aaPredicted RBP20■□□□□ 0.79
UBQLN1-201ENST00000257468 FOXD4L3Q6VB84 417 aaPredicted RBP20■□□□□ 0.79
UBQLN1-201ENST00000257468 LRP10Q7Z4F1 713 aa20■□□□□ 0.79
UBQLN1-201ENST00000257468 INTS4Q96HW7 963 aaKnown RBP20■□□□□ 0.79
UBQLN1-201ENST00000257468 GPATCH3Q96I76 525 aa20■□□□□ 0.79
UBQLN1-201ENST00000257468 NSFL1CQ9UNZ2 370 aaKnown RBP20■□□□□ 0.79
UBQLN1-201ENST00000257468 HDAC5Q9UQL6 1122 aa20■□□□□ 0.79
UBQLN1-201ENST00000257468 ZSCAN23Q3MJ62 389 aa20■□□□□ 0.79
UBQLN1-201ENST00000257468 DCAF5Q96JK2 942 aa20■□□□□ 0.79
UBQLN1-201ENST00000257468 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20■□□□□ 0.79
UBQLN1-201ENST00000257468 TTC14Q96N46 770 aa19.99■□□□□ 0.79
UBQLN1-201ENST00000257468 METTL22Q9BUU2 404 aaPredicted RBP19.99■□□□□ 0.79
UBQLN1-201ENST00000257468 SNRPA1P09661 255 aaKnown RBP19.99■□□□□ 0.79
UBQLN1-201ENST00000257468 AK2P54819 239 aa19.99■□□□□ 0.79
UBQLN1-201ENST00000257468 CADPS2Q86UW7 1296 aa19.99■□□□□ 0.79
UBQLN1-201ENST00000257468 SPATA31A3Q5VYP0 1347 aa19.98■□□□□ 0.79
UBQLN1-201ENST00000257468 DTNBO60941 627 aa19.98■□□□□ 0.79
UBQLN1-201ENST00000257468 ANKRD13DQ6ZTN6 518 aa19.98■□□□□ 0.79
UBQLN1-201ENST00000257468 MRC1P22897 1456 aa19.98■□□□□ 0.79
UBQLN1-201ENST00000257468 PKD1L3Q7Z443 1732 aa19.97■□□□□ 0.79
UBQLN1-201ENST00000257468 FAM227BQ96M60 508 aa19.97■□□□□ 0.79
UBQLN1-201ENST00000257468 ATP5J2-PTCD1G3V325 749 aa19.97■□□□□ 0.79
UBQLN1-201ENST00000257468 PTCD1O75127 700 aaKnown RBP19.97■□□□□ 0.79
UBQLN1-201ENST00000257468 CASTP20810 708 aaKnown RBP19.97■□□□□ 0.79
UBQLN1-201ENST00000257468 ADCK5Q3MIX3 580 aa19.97■□□□□ 0.79
UBQLN1-201ENST00000257468 PRPF40BQ6NWY9 871 aaKnown RBP19.97■□□□□ 0.79
UBQLN1-201ENST00000257468 RUFY3Q7L099 469 aa19.97■□□□□ 0.79
UBQLN1-201ENST00000257468 DDX54Q8TDD1 881 aaKnown RBP19.97■□□□□ 0.79
UBQLN1-201ENST00000257468 CABP4P57796 275 aa19.96■□□□□ 0.79
UBQLN1-201ENST00000257468 EVI5LQ96CN4 794 aa19.96■□□□□ 0.79
UBQLN1-201ENST00000257468 FMNL2Q96PY5 1086 aa19.96■□□□□ 0.79
UBQLN1-201ENST00000257468 BOLA2Q9H3K6 86 aa19.96■□□□□ 0.79
UBQLN1-201ENST00000257468 RUFY2Q8WXA3 655 aa19.96■□□□□ 0.79
UBQLN1-201ENST00000257468 AFDNP55196 1824 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms