RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 PRAMEF22A3QJZ6 481 aa17.13■□□□□ 0.33
APOBEC3A-201ENST00000249116 SLC4A2P04920 1241 aa17.13■□□□□ 0.33
APOBEC3A-201ENST00000249116 PIP4K2AP48426 406 aaPredicted RBP17.13■□□□□ 0.33
APOBEC3A-201ENST00000249116 TNRC6CQ9HCJ0 1690 aaKnown RBP17.12■□□□□ 0.33
APOBEC3A-201ENST00000249116 SBF1O95248 1867 aa17.12■□□□□ 0.33
APOBEC3A-201ENST00000249116 GLTPD2A6NH11 291 aa17.12■□□□□ 0.33
APOBEC3A-201ENST00000249116 NFKBIEO00221 500 aa17.12■□□□□ 0.33
APOBEC3A-201ENST00000249116 CNKSR1Q969H4 720 aa17.12■□□□□ 0.33
APOBEC3A-201ENST00000249116 C21orf2O43822 256 aa17.11■□□□□ 0.33
APOBEC3A-201ENST00000249116 PRELPP51888 382 aa17.11■□□□□ 0.33
APOBEC3A-201ENST00000249116 STYK1Q6J9G0 422 aa17.11■□□□□ 0.33
APOBEC3A-201ENST00000249116 NBPF5PQ86XG9 351 aaPredicted RBP17.11■□□□□ 0.33
APOBEC3A-201ENST00000249116 PNISRQ8TF01 805 aaKnown RBP17.11■□□□□ 0.33
APOBEC3A-201ENST00000249116 ZNF219Q9P2Y4 722 aaPredicted RBP17.11■□□□□ 0.33
APOBEC3A-201ENST00000249116 BCORQ6W2J9 1755 aa17.1■□□□□ 0.33
APOBEC3A-201ENST00000249116 RGL2O15211 777 aa17.1■□□□□ 0.33
APOBEC3A-201ENST00000249116 DPY19L2Q6NUT2 758 aa17.1■□□□□ 0.33
APOBEC3A-201ENST00000249116 SMC1BQ8NDV3 1235 aa17.1■□□□□ 0.33
APOBEC3A-201ENST00000249116 PNNQ9H307 717 aaKnown RBP17.1■□□□□ 0.33
APOBEC3A-201ENST00000249116 ANKRD31Q8N7Z5 1873 aa17.1■□□□□ 0.33
APOBEC3A-201ENST00000249116 SRGNP10124 158 aa17.09■□□□□ 0.33
APOBEC3A-201ENST00000249116 VEGFAP15692 232 aaPredicted RBP17.09■□□□□ 0.33
APOBEC3A-201ENST00000249116 SOGA3Q5TF21 947 aa17.09■□□□□ 0.33
APOBEC3A-201ENST00000249116 MASTLQ96GX5 879 aa17.09■□□□□ 0.33
APOBEC3A-201ENST00000249116 TPTE2Q6XPS3 522 aa17.08■□□□□ 0.32
APOBEC3A-201ENST00000249116 LTBP3Q9NS15 1303 aa17.07■□□□□ 0.32
APOBEC3A-201ENST00000249116 NBPF26B4DH59 902 aa17.07■□□□□ 0.32
APOBEC3A-201ENST00000249116 ERFEQ4G0M1 354 aa17.07■□□□□ 0.32
APOBEC3A-201ENST00000249116 IFFO2Q5TF58 517 aa17.07■□□□□ 0.32
APOBEC3A-201ENST00000249116 NBPF10Q6P3W6 841 aaKnown RBP17.07■□□□□ 0.32
APOBEC3A-201ENST00000249116 NBPF15Q8N660 670 aa17.07■□□□□ 0.32
APOBEC3A-201ENST00000249116 DNAJC5GQ8N7S2 189 aa17.07■□□□□ 0.32
APOBEC3A-201ENST00000249116 TAOK3Q9H2K8 898 aa17.07■□□□□ 0.32
APOBEC3A-201ENST00000249116 MIS18AQ9NYP9 233 aa17.07■□□□□ 0.32
APOBEC3A-201ENST00000249116 NIP7Q9Y221 180 aaKnown RBP eCLIP17.07■□□□□ 0.32
APOBEC3A-201ENST00000249116 COL11A2P13942 1736 aaPredicted RBP17.07■□□□□ 0.32
APOBEC3A-201ENST00000249116 MAPK8IP3Q9UPT6 1336 aa17.06■□□□□ 0.32
APOBEC3A-201ENST00000249116 PRPF40BQ6NWY9 871 aaKnown RBP17.06■□□□□ 0.32
APOBEC3A-201ENST00000249116 TIAM2Q8IVF5 1701 aa17.06■□□□□ 0.32
APOBEC3A-201ENST00000249116 NFE2L2Q16236 605 aa17.05■□□□□ 0.32
APOBEC3A-201ENST00000249116 PLEKHF1Q96S99 279 aa17.05■□□□□ 0.32
APOBEC3A-201ENST00000249116 WDR90Q96KV7 1748 aa17.05■□□□□ 0.32
APOBEC3A-201ENST00000249116 NPR1P16066 1061 aa17.04■□□□□ 0.32
APOBEC3A-201ENST00000249116 CEP350Q5VT06 3117 aa17.04■□□□□ 0.32
APOBEC3A-201ENST00000249116 GTF2E1P29083 439 aaPredicted RBP17.04■□□□□ 0.32
APOBEC3A-201ENST00000249116 FAM177BA6PVY3 158 aa17.03■□□□□ 0.32
APOBEC3A-201ENST00000249116 EIF4A1P60842 406 aaKnown RBP17.03■□□□□ 0.32
APOBEC3A-201ENST00000249116 KLRG1Q96E93 195 aa17.03■□□□□ 0.32
APOBEC3A-201ENST00000249116 LAMB4A4D0S4 1761 aa17.02■□□□□ 0.31
APOBEC3A-201ENST00000249116 KLRG2A4D1S0 409 aaPredicted RBP17.02■□□□□ 0.31
APOBEC3A-201ENST00000249116 ERVV-1B6SEH8 477 aa17.02■□□□□ 0.31
APOBEC3A-201ENST00000249116 HTRA3P83110 453 aa17.02■□□□□ 0.31
APOBEC3A-201ENST00000249116 HLFQ16534 295 aa17.02■□□□□ 0.31
APOBEC3A-201ENST00000249116 CCDC93Q567U6 631 aa17.02■□□□□ 0.31
APOBEC3A-201ENST00000249116 KIF6Q6ZMV9 814 aa17.02■□□□□ 0.31
APOBEC3A-201ENST00000249116 NGEFQ8N5V2 710 aa17.02■□□□□ 0.31
APOBEC3A-201ENST00000249116 FER1L6Q2WGJ9 1857 aa17.02■□□□□ 0.31
APOBEC3A-201ENST00000249116 CCDC88AQ3V6T2 1871 aa17.01■□□□□ 0.31
APOBEC3A-201ENST00000249116 THUMPD2Q9BTF0 503 aaKnown RBP17.01■□□□□ 0.31
APOBEC3A-201ENST00000249116 NYXQ9GZU5 481 aa17.01■□□□□ 0.31
APOBEC3A-201ENST00000249116 RRP7AQ9Y3A4 280 aaKnown RBP17.01■□□□□ 0.31
APOBEC3A-201ENST00000249116 SLX4Q8IY92 1834 aa17■□□□□ 0.31
APOBEC3A-201ENST00000249116 POTECB2RU33 542 aa17■□□□□ 0.31
APOBEC3A-201ENST00000249116 ALDH1B1P30837 517 aa17■□□□□ 0.31
APOBEC3A-201ENST00000249116 RALBP1Q15311 655 aa17■□□□□ 0.31
APOBEC3A-201ENST00000249116 KDM3BQ7LBC6 1761 aa17■□□□□ 0.31
APOBEC3A-201ENST00000249116 ARFGEF2Q9Y6D5 1785 aa17■□□□□ 0.31
APOBEC3A-201ENST00000249116 DLG5Q8TDM6 1919 aa17■□□□□ 0.31
APOBEC3A-201ENST00000249116 MAP3K15Q6ZN16 1313 aa17■□□□□ 0.31
APOBEC3A-201ENST00000249116 MYL6BP14649 208 aa16.99■□□□□ 0.31
APOBEC3A-201ENST00000249116 C7orf43Q8WVR3 580 aa16.99■□□□□ 0.31
APOBEC3A-201ENST00000249116 FKBP4Q02790 459 aaKnown RBP eCLIP16.98■□□□□ 0.31
APOBEC3A-201ENST00000249116 RTKN2Q8IZC4 609 aa16.98■□□□□ 0.31
APOBEC3A-201ENST00000249116 TSPYL4Q9UJ04 414 aa16.98■□□□□ 0.31
APOBEC3A-201ENST00000249116 DICER1Q9UPY3 1922 aaKnown RBP16.98■□□□□ 0.31
APOBEC3A-201ENST00000249116 ERBB4Q15303 1308 aa16.98■□□□□ 0.31
APOBEC3A-201ENST00000249116 CACNA1SQ13698 1873 aa16.97■□□□□ 0.31
APOBEC3A-201ENST00000249116 CAPN15O75808 1086 aa16.97■□□□□ 0.31
APOBEC3A-201ENST00000249116 DDNO94850 711 aaPredicted RBP16.97■□□□□ 0.31
APOBEC3A-201ENST00000249116 JMYQ8N9B5 988 aa16.97■□□□□ 0.31
APOBEC3A-201ENST00000249116 IQCA1LA6NCM1 817 aa16.96■□□□□ 0.31
APOBEC3A-201ENST00000249116 RIPK4P57078 832 aa16.96■□□□□ 0.31
APOBEC3A-201ENST00000249116 LMOD3Q0VAK6 560 aa16.96■□□□□ 0.31
APOBEC3A-201ENST00000249116 TTLL7Q6ZT98 887 aa16.96■□□□□ 0.31
APOBEC3A-201ENST00000249116 ZBTB3Q9H5J0 574 aa16.96■□□□□ 0.31
APOBEC3A-201ENST00000249116 SPINK5Q9NQ38 1064 aaPredicted RBP16.96■□□□□ 0.31
APOBEC3A-201ENST00000249116 NUTM1Q86Y26 1132 aa16.96■□□□□ 0.3
APOBEC3A-201ENST00000249116 BABAM1Q9NWV8 329 aa16.96■□□□□ 0.3
APOBEC3A-201ENST00000249116 IBTKQ9P2D0 1353 aaPredicted RBP16.95■□□□□ 0.3
APOBEC3A-201ENST00000249116 CRY2Q49AN0 593 aa16.95■□□□□ 0.3
APOBEC3A-201ENST00000249116 CHADLQ6NUI6 762 aa16.95■□□□□ 0.3
APOBEC3A-201ENST00000249116 GPTP24298 496 aa16.94■□□□□ 0.3
APOBEC3A-201ENST00000249116 CC2D2BQ6DHV5 1058 aa16.94■□□□□ 0.3
APOBEC3A-201ENST00000249116 GIGYF2Q6Y7W6 1299 aaKnown RBP16.94■□□□□ 0.3
APOBEC3A-201ENST00000249116 RPGRQ92834 1020 aaKnown RBP16.94■□□□□ 0.3
APOBEC3A-201ENST00000249116 ZNF277Q9NRM2 450 aaPredicted RBP16.94■□□□□ 0.3
APOBEC3A-201ENST00000249116 ABCC12Q96J65 1359 aa16.93■□□□□ 0.3
APOBEC3A-201ENST00000249116 EIF2S2P20042 333 aaKnown RBP16.93■□□□□ 0.3
APOBEC3A-201ENST00000249116 TMPOP42166 694 aaKnown RBP16.93■□□□□ 0.3
APOBEC3A-201ENST00000249116 OLFM4Q6UX06 510 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms