RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 ME1P48163 572 aa10.9□□□□□ -0.66
COL21A1-201ENST00000244728 G2E3Q7L622 706 aa10.9□□□□□ -0.66
COL21A1-201ENST00000244728 GPT2Q8TD30 523 aa10.9□□□□□ -0.66
COL21A1-201ENST00000244728 ERICH4A6NGS2 130 aa10.9□□□□□ -0.66
COL21A1-201ENST00000244728 ANAPC15P60006 121 aa10.9□□□□□ -0.66
COL21A1-201ENST00000244728 STK38Q15208 465 aa10.9□□□□□ -0.66
COL21A1-201ENST00000244728 IFNL2Q8IZJ0 200 aa10.9□□□□□ -0.66
COL21A1-201ENST00000244728 PA2G4Q9UQ80 394 aaKnown RBP10.9□□□□□ -0.66
COL21A1-201ENST00000244728 RAB11FIP3O75154 756 aa10.9□□□□□ -0.67
COL21A1-201ENST00000244728 ATP2B2Q01814 1243 aa10.9□□□□□ -0.67
COL21A1-201ENST00000244728 NFATC2IPQ8NCF5 419 aa10.9□□□□□ -0.67
COL21A1-201ENST00000244728 ORAI2Q96SN7 254 aa10.9□□□□□ -0.67
COL21A1-201ENST00000244728 LRP2BPQ9P2M1 347 aa10.9□□□□□ -0.67
COL21A1-201ENST00000244728 PPP1R1BQ9UD71 204 aaPredicted RBP10.9□□□□□ -0.67
COL21A1-201ENST00000244728 GUCY1B3Q02153 619 aa10.89□□□□□ -0.67
COL21A1-201ENST00000244728 SART3Q15020 963 aaKnown RBP10.89□□□□□ -0.67
COL21A1-201ENST00000244728 ANKRD1Q15327 319 aa10.89□□□□□ -0.67
COL21A1-201ENST00000244728 PCMTD1Q96MG8 357 aaPredicted RBP10.89□□□□□ -0.67
COL21A1-201ENST00000244728 PHAXQ9H814 394 aaKnown RBP10.89□□□□□ -0.67
COL21A1-201ENST00000244728 XAGE3Q8WTP9 111 aa10.89□□□□□ -0.67
COL21A1-201ENST00000244728 PUS7Q96PZ0 661 aaKnown RBP10.89□□□□□ -0.67
COL21A1-201ENST00000244728 CGNQ9P2M7 1197 aaKnown RBP10.89□□□□□ -0.67
COL21A1-201ENST00000244728 TRMT112Q9UI30 125 aaKnown RBP10.89□□□□□ -0.67
COL21A1-201ENST00000244728 GADD45BO75293 160 aaPredicted RBP10.89□□□□□ -0.67
COL21A1-201ENST00000244728 GCP02774 474 aa10.89□□□□□ -0.67
COL21A1-201ENST00000244728 IFIT1P09914 478 aaKnown RBP10.89□□□□□ -0.67
COL21A1-201ENST00000244728 SMAP1Q8IYB5 467 aaPredicted RBP10.89□□□□□ -0.67
COL21A1-201ENST00000244728 HYPKQ9NX55 129 aa10.89□□□□□ -0.67
COL21A1-201ENST00000244728 RAI14Q9P0K7 980 aa10.89□□□□□ -0.67
COL21A1-201ENST00000244728 CLIP2Q9UDT6 1046 aa10.89□□□□□ -0.67
COL21A1-201ENST00000244728 DNM1Q05193 864 aaKnown RBP10.88□□□□□ -0.67
COL21A1-201ENST00000244728 PTPN14Q15678 1187 aa10.88□□□□□ -0.67
COL21A1-201ENST00000244728 CWF19L2Q2TBE0 894 aaKnown RBP10.88□□□□□ -0.67
COL21A1-201ENST00000244728 ANKRD13DQ6ZTN6 518 aa10.88□□□□□ -0.67
COL21A1-201ENST00000244728 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.88□□□□□ -0.67
COL21A1-201ENST00000244728 SH2B1Q9NRF2 756 aaPredicted RBP10.88□□□□□ -0.67
COL21A1-201ENST00000244728 CCDC186Q7Z3E2 898 aa10.88□□□□□ -0.67
COL21A1-201ENST00000244728 INTS4Q96HW7 963 aaKnown RBP10.88□□□□□ -0.67
COL21A1-201ENST00000244728 SCAND2PQ9GZW5 306 aaPredicted RBP10.88□□□□□ -0.67
COL21A1-201ENST00000244728 GPS2Q13227 327 aa10.88□□□□□ -0.67
COL21A1-201ENST00000244728 CADPS2Q86UW7 1296 aa10.88□□□□□ -0.67
COL21A1-201ENST00000244728 GOLGA6L1Q8N7Z2 621 aa10.88□□□□□ -0.67
COL21A1-201ENST00000244728 NECAB1Q8N987 351 aa10.88□□□□□ -0.67
COL21A1-201ENST00000244728 RHPN1Q8TCX5 695 aa10.88□□□□□ -0.67
COL21A1-201ENST00000244728 ECHDC1Q9NTX5 307 aa10.88□□□□□ -0.67
COL21A1-201ENST00000244728 TDO2P48775 406 aa10.88□□□□□ -0.67
COL21A1-201ENST00000244728 IKQ13123 557 aaPredicted RBP10.88□□□□□ -0.67
COL21A1-201ENST00000244728 RAB11FIP4Q86YS3 637 aa10.88□□□□□ -0.67
COL21A1-201ENST00000244728 DDX17Q92841 729 aaKnown RBP10.88□□□□□ -0.67
COL21A1-201ENST00000244728 YTHDC2Q9H6S0 1430 aaKnown RBP10.88□□□□□ -0.67
COL21A1-201ENST00000244728 TRMT1Q9NXH9 659 aaKnown RBP10.88□□□□□ -0.67
COL21A1-201ENST00000244728 F13A1P00488 732 aa10.87□□□□□ -0.67
COL21A1-201ENST00000244728 CHMLP26374 656 aa10.87□□□□□ -0.67
COL21A1-201ENST00000244728 ZNF165P49910 485 aa10.87□□□□□ -0.67
COL21A1-201ENST00000244728 MYRIPQ8NFW9 859 aa10.87□□□□□ -0.67
COL21A1-201ENST00000244728 GOLIM4O00461 696 aa10.87□□□□□ -0.67
COL21A1-201ENST00000244728 DTNBO60941 627 aa10.87□□□□□ -0.67
COL21A1-201ENST00000244728 IFIT5Q13325 482 aaKnown RBP10.87□□□□□ -0.67
COL21A1-201ENST00000244728 TSR1Q2NL82 804 aaKnown RBP10.87□□□□□ -0.67
COL21A1-201ENST00000244728 MSH6P52701 1360 aa10.87□□□□□ -0.67
COL21A1-201ENST00000244728 EXOC5O00471 708 aa10.87□□□□□ -0.67
COL21A1-201ENST00000244728 HAND2P61296 217 aa10.87□□□□□ -0.67
COL21A1-201ENST00000244728 NGLY1Q96IV0 654 aa10.87□□□□□ -0.67
COL21A1-201ENST00000244728 PLEKHF1Q96S99 279 aa10.87□□□□□ -0.67
COL21A1-201ENST00000244728 SAMD9LQ8IVG5 1584 aa10.87□□□□□ -0.67
COL21A1-201ENST00000244728 NPATQ14207 1427 aa10.86□□□□□ -0.67
COL21A1-201ENST00000244728 MAPK8IP2Q13387 824 aaPredicted RBP10.86□□□□□ -0.67
COL21A1-201ENST00000244728 DDX46Q7L014 1031 aaKnown RBP10.86□□□□□ -0.67
COL21A1-201ENST00000244728 ATP10AO60312 1499 aa10.86□□□□□ -0.67
COL21A1-201ENST00000244728 MINDY4BA8MYZ0 360 aa10.86□□□□□ -0.67
COL21A1-201ENST00000244728 PDILTQ8N807 584 aa10.86□□□□□ -0.67
COL21A1-201ENST00000244728 CFAP45Q9UL16 551 aa10.86□□□□□ -0.67
COL21A1-201ENST00000244728 CCT2P78371 535 aaKnown RBP10.86□□□□□ -0.67
COL21A1-201ENST00000244728 LDHAL6AQ6ZMR3 332 aa10.86□□□□□ -0.67
COL21A1-201ENST00000244728 CEP57L1Q8IYX8 460 aa10.86□□□□□ -0.67
COL21A1-201ENST00000244728 FAM200AQ8TCP9 573 aa10.86□□□□□ -0.67
COL21A1-201ENST00000244728 BRD1O95696 1058 aa10.85□□□□□ -0.67
COL21A1-201ENST00000244728 PTGS1P23219 599 aa10.85□□□□□ -0.67
COL21A1-201ENST00000244728 LTKP29376 864 aa10.85□□□□□ -0.67
COL21A1-201ENST00000244728 AK2P54819 239 aa10.85□□□□□ -0.67
COL21A1-201ENST00000244728 FAM177A1Q8N128 213 aaPredicted RBP10.85□□□□□ -0.67
COL21A1-201ENST00000244728 ZNF396Q96N95 335 aaPredicted RBP10.85□□□□□ -0.67
COL21A1-201ENST00000244728 PHF23Q9BUL5 403 aaPredicted RBP10.85□□□□□ -0.67
COL21A1-201ENST00000244728 GNL3LQ9NVN8 582 aaKnown RBP10.85□□□□□ -0.67
COL21A1-201ENST00000244728 SYT1P21579 422 aa10.85□□□□□ -0.67
COL21A1-201ENST00000244728 BRPF1P55201 1214 aaPredicted RBP10.85□□□□□ -0.67
COL21A1-201ENST00000244728 AIDAQ96BJ3 306 aa10.85□□□□□ -0.67
COL21A1-201ENST00000244728 NACAP1Q9BZK3 213 aa10.85□□□□□ -0.67
COL21A1-201ENST00000244728 IBTKQ9P2D0 1353 aaPredicted RBP10.85□□□□□ -0.67
COL21A1-201ENST00000244728 SNRPA1P09661 255 aaKnown RBP10.85□□□□□ -0.67
COL21A1-201ENST00000244728 CPA1P15085 419 aa10.85□□□□□ -0.67
COL21A1-201ENST00000244728 ACSBG1Q96GR2 724 aa10.85□□□□□ -0.67
COL21A1-201ENST00000244728 LRRC2Q9BYS8 371 aa10.85□□□□□ -0.67
COL21A1-201ENST00000244728 LGR6Q9HBX8 967 aa10.85□□□□□ -0.67
COL21A1-201ENST00000244728 DDX19AQ9NUU7 478 aaKnown RBP10.85□□□□□ -0.67
COL21A1-201ENST00000244728 ABCC4O15439 1325 aa10.85□□□□□ -0.67
COL21A1-201ENST00000244728 TTC21AQ8NDW8 1320 aa10.85□□□□□ -0.67
COL21A1-201ENST00000244728 SBNO2Q9Y2G9 1366 aa10.85□□□□□ -0.67
COL21A1-201ENST00000244728 IL13P35225 146 aa10.85□□□□□ -0.67
COL21A1-201ENST00000244728 ANO6Q4KMQ2 910 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms