RNA–Protein interactions for RNA: ENST00000244709.8

TREM1-201, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TREM1, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-201ENST00000244709 TMEM57Q8N5G2 664 aa14.59□□□□□ -0.07
TREM1-201ENST00000244709 AK7Q96M32 723 aa14.59□□□□□ -0.07
TREM1-201ENST00000244709 NUP98P52948 1817 aa14.59□□□□□ -0.07
TREM1-201ENST00000244709 AFDNP55196 1824 aaKnown RBP14.59□□□□□ -0.07
TREM1-201ENST00000244709 ANKRD13DQ6ZTN6 518 aa14.58□□□□□ -0.07
TREM1-201ENST00000244709 AMIGO3Q86WK7 504 aa14.58□□□□□ -0.07
TREM1-201ENST00000244709 CCDC125Q86Z20 511 aa14.58□□□□□ -0.07
TREM1-201ENST00000244709 CRBNQ96SW2 442 aa14.58□□□□□ -0.07
TREM1-201ENST00000244709 MAP3K2Q9Y2U5 619 aa14.58□□□□□ -0.07
TREM1-201ENST00000244709 ANKRD36CQ5JPF3 1778 aa14.58□□□□□ -0.08
TREM1-201ENST00000244709 RPS6KA4O75676 772 aa14.58□□□□□ -0.08
TREM1-201ENST00000244709 SLC4A10Q6U841 1118 aa14.58□□□□□ -0.08
TREM1-201ENST00000244709 KIF6Q6ZMV9 814 aa14.58□□□□□ -0.08
TREM1-201ENST00000244709 RIC3Q7Z5B4 369 aa14.58□□□□□ -0.08
TREM1-201ENST00000244709 NPM2Q86SE8 214 aaKnown RBP14.58□□□□□ -0.08
TREM1-201ENST00000244709 DNAAF4Q8WXU2 420 aa14.58□□□□□ -0.08
TREM1-201ENST00000244709 ARXQ96QS3 562 aa14.58□□□□□ -0.08
TREM1-201ENST00000244709 ZBTB3Q9H5J0 574 aa14.58□□□□□ -0.08
TREM1-201ENST00000244709 COG6Q9Y2V7 657 aa14.58□□□□□ -0.08
TREM1-201ENST00000244709 SCN7AQ01118 1682 aa14.57□□□□□ -0.08
TREM1-201ENST00000244709 FKBP8Q14318 412 aa14.57□□□□□ -0.08
TREM1-201ENST00000244709 ZNF827Q17R98 1081 aa14.57□□□□□ -0.08
TREM1-201ENST00000244709 ILDR2Q71H61 639 aa14.57□□□□□ -0.08
TREM1-201ENST00000244709 DZIP3Q86Y13 1208 aaKnown RBP14.57□□□□□ -0.08
TREM1-201ENST00000244709 ITPRIPQ8IWB1 547 aa14.57□□□□□ -0.08
TREM1-201ENST00000244709 PLBD2Q8NHP8 589 aa14.57□□□□□ -0.08
TREM1-201ENST00000244709 TBC1D2BQ9UPU7 963 aa14.57□□□□□ -0.08
TREM1-201ENST00000244709 RTCBQ9Y3I0 505 aaKnown RBP14.57□□□□□ -0.08
TREM1-201ENST00000244709 PHF14O94880 888 aa14.56□□□□□ -0.08
TREM1-201ENST00000244709 HMGB2P26583 209 aaKnown RBP14.56□□□□□ -0.08
TREM1-201ENST00000244709 UPF1Q92900 1129 aaKnown RBP eCLIP14.56□□□□□ -0.08
TREM1-201ENST00000244709 AKT1S1Q96B36 256 aa14.56□□□□□ -0.08
TREM1-201ENST00000244709 MAP3K15Q6ZN16 1313 aa14.56□□□□□ -0.08
TREM1-201ENST00000244709 ATP10DQ9P241 1426 aa14.56□□□□□ -0.08
TREM1-201ENST00000244709 A0A087WZG4 1122 aa14.55□□□□□ -0.08
TREM1-201ENST00000244709 MVPQ14764 893 aaKnown RBP14.55□□□□□ -0.08
TREM1-201ENST00000244709 EXOC6Q8TAG9 804 aa14.55□□□□□ -0.08
TREM1-201ENST00000244709 CCT4P50991 539 aaKnown RBP14.55□□□□□ -0.08
TREM1-201ENST00000244709 BEND3Q5T5X7 828 aa14.55□□□□□ -0.08
TREM1-201ENST00000244709 INTS3Q68E01 1043 aaKnown RBP14.55□□□□□ -0.08
TREM1-201ENST00000244709 MYD88Q99836 296 aa14.55□□□□□ -0.08
TREM1-201ENST00000244709 METTL22Q9BUU2 404 aaPredicted RBP14.55□□□□□ -0.08
TREM1-201ENST00000244709 CAMTA2O94983 1202 aa14.54□□□□□ -0.08
TREM1-201ENST00000244709 HLFQ16534 295 aa14.54□□□□□ -0.08
TREM1-201ENST00000244709 ANO8Q9HCE9 1232 aaPredicted RBP14.54□□□□□ -0.08
TREM1-201ENST00000244709 QSER1Q2KHR3 1735 aa14.54□□□□□ -0.08
TREM1-201ENST00000244709 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.53□□□□□ -0.08
TREM1-201ENST00000244709 ERVV-1B6SEH8 477 aa14.53□□□□□ -0.08
TREM1-201ENST00000244709 SSFA2P28290 1259 aa14.53□□□□□ -0.08
TREM1-201ENST00000244709 TRAPPC3LQ5T215 181 aa14.53□□□□□ -0.08
TREM1-201ENST00000244709 ARHGEF1Q92888 912 aaKnown RBP14.53□□□□□ -0.08
TREM1-201ENST00000244709 SRCIN1Q9C0H9 1055 aa14.53□□□□□ -0.08
TREM1-201ENST00000244709 IGKV5-2P06315 115 aa14.52□□□□□ -0.08
TREM1-201ENST00000244709 ADRA2BP18089 450 aa14.52□□□□□ -0.08
TREM1-201ENST00000244709 NEXNQ0ZGT2 675 aa14.52□□□□□ -0.08
TREM1-201ENST00000244709 CWF19L2Q2TBE0 894 aaKnown RBP14.52□□□□□ -0.08
TREM1-201ENST00000244709 GIGYF2Q6Y7W6 1299 aaKnown RBP14.52□□□□□ -0.08
TREM1-201ENST00000244709 TFCP2L1Q9NZI6 479 aa14.52□□□□□ -0.08
TREM1-201ENST00000244709 SRP68Q9UHB9 627 aaKnown RBP14.52□□□□□ -0.08
TREM1-201ENST00000244709 DDX19BQ9UMR2 479 aa14.52□□□□□ -0.08
TREM1-201ENST00000244709 NARFQ9UHQ1 456 aa14.52□□□□□ -0.09
TREM1-201ENST00000244709 ATP5J2-PTCD1G3V325 749 aa14.51□□□□□ -0.09
TREM1-201ENST00000244709 RFC4P35249 363 aa14.51□□□□□ -0.09
TREM1-201ENST00000244709 TCIRG1Q13488 830 aa14.51□□□□□ -0.09
TREM1-201ENST00000244709 USPL1Q5W0Q7 1092 aa14.51□□□□□ -0.09
TREM1-201ENST00000244709 LINS1Q8NG48 757 aa14.51□□□□□ -0.09
TREM1-201ENST00000244709 STK32BQ9NY57 414 aa14.51□□□□□ -0.09
TREM1-201ENST00000244709 USP42Q9H9J4 1324 aaKnown RBP14.5□□□□□ -0.09
TREM1-201ENST00000244709 NEURL1BA8MQ27 555 aa14.5□□□□□ -0.09
TREM1-201ENST00000244709 ZPR1O75312 459 aa14.5□□□□□ -0.09
TREM1-201ENST00000244709 ALDH1L1O75891 902 aa14.5□□□□□ -0.09
TREM1-201ENST00000244709 SLC15A2Q16348 729 aa14.5□□□□□ -0.09
TREM1-201ENST00000244709 GTF3C3Q9Y5Q9 886 aa14.5□□□□□ -0.09
TREM1-201ENST00000244709 PNPLA7Q6ZV29 1317 aa14.5□□□□□ -0.09
TREM1-201ENST00000244709 ZBTB7BO15156 539 aaPredicted RBP14.49□□□□□ -0.09
TREM1-201ENST00000244709 HSP90AB3PQ58FF7 597 aa14.49□□□□□ -0.09
TREM1-201ENST00000244709 MEIS3Q99687 375 aa14.49□□□□□ -0.09
TREM1-201ENST00000244709 ISCA1Q9BUE6 129 aa14.49□□□□□ -0.09
TREM1-201ENST00000244709 BCL2L12Q9HB09 334 aa14.49□□□□□ -0.09
TREM1-201ENST00000244709 GPTP24298 496 aa14.49□□□□□ -0.09
TREM1-201ENST00000244709 COL23A1Q86Y22 540 aaPredicted RBP14.49□□□□□ -0.09
TREM1-201ENST00000244709 ZNF652Q9Y2D9 606 aa14.49□□□□□ -0.09
TREM1-201ENST00000244709 CLEC4GQ6UXB4 293 aa14.48□□□□□ -0.09
TREM1-201ENST00000244709 ZNF34Q8IZ26 560 aa14.48□□□□□ -0.09
TREM1-201ENST00000244709 USP44Q9H0E7 712 aa14.48□□□□□ -0.09
TREM1-201ENST00000244709 IBTKQ9P2D0 1353 aaPredicted RBP14.48□□□□□ -0.09
TREM1-201ENST00000244709 COL24A1Q17RW2 1714 aa14.48□□□□□ -0.09
TREM1-201ENST00000244709 UBN2Q6ZU65 1347 aa14.47□□□□□ -0.09
TREM1-201ENST00000244709 RGL2O15211 777 aa14.47□□□□□ -0.09
TREM1-201ENST00000244709 GCKRQ14397 625 aa14.47□□□□□ -0.09
TREM1-201ENST00000244709 CCDC191Q8NCU4 936 aa14.47□□□□□ -0.09
TREM1-201ENST00000244709 FLAD1Q8NFF5 587 aa14.47□□□□□ -0.09
TREM1-201ENST00000244709 CWC25Q9NXE8 425 aaPredicted RBP14.47□□□□□ -0.09
TREM1-201ENST00000244709 MSH5O43196 834 aa14.46□□□□□ -0.09
TREM1-201ENST00000244709 TRIM28Q13263 835 aaKnown RBP14.46□□□□□ -0.09
TREM1-201ENST00000244709 NLRP10Q86W26 655 aa14.46□□□□□ -0.09
TREM1-201ENST00000244709 CHMP4BQ9H444 224 aaKnown RBP14.46□□□□□ -0.09
TREM1-201ENST00000244709 C1orf115Q9H7X2 142 aa14.46□□□□□ -0.09
TREM1-201ENST00000244709 ZBTB40Q9NUA8 1239 aa14.46□□□□□ -0.09
TREM1-201ENST00000244709 C9orf78Q9NZ63 289 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms