RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 MTX1Q13505 466 aa17.4■□□□□ 0.38
HIF3A-202ENST00000244303 CADPS2Q86UW7 1296 aa17.4■□□□□ 0.38
HIF3A-202ENST00000244303 LSG1Q9H089 658 aaKnown RBP17.4■□□□□ 0.38
HIF3A-202ENST00000244303 SNX14Q9Y5W7 946 aa17.4■□□□□ 0.38
HIF3A-202ENST00000244303 USP42Q9H9J4 1324 aaKnown RBP17.4■□□□□ 0.38
HIF3A-202ENST00000244303 PRAMEF22A3QJZ6 481 aa17.4■□□□□ 0.38
HIF3A-202ENST00000244303 HSPA2P54652 639 aa17.4■□□□□ 0.38
HIF3A-202ENST00000244303 CWC27Q6UX04 472 aaKnown RBP17.4■□□□□ 0.38
HIF3A-202ENST00000244303 NLRP2Q9NX02 1062 aa17.4■□□□□ 0.38
HIF3A-202ENST00000244303 C9orf78Q9NZ63 289 aaPredicted RBP17.4■□□□□ 0.38
HIF3A-202ENST00000244303 TTC41PQ6P2S7 1318 aa17.39■□□□□ 0.37
HIF3A-202ENST00000244303 NPHP3Q7Z494 1330 aa17.39■□□□□ 0.37
HIF3A-202ENST00000244303 GLIPR1L2Q4G1C9 344 aa17.38■□□□□ 0.37
HIF3A-202ENST00000244303 CABLES1Q8TDN4 633 aa17.38■□□□□ 0.37
HIF3A-202ENST00000244303 HEG1Q9ULI3 1381 aa17.38■□□□□ 0.37
HIF3A-202ENST00000244303 SYCE3A1L190 88 aa17.38■□□□□ 0.37
HIF3A-202ENST00000244303 ALDH1L1O75891 902 aa17.38■□□□□ 0.37
HIF3A-202ENST00000244303 GLRX3O76003 335 aaKnown RBP17.38■□□□□ 0.37
HIF3A-202ENST00000244303 MBD3O95983 291 aa17.38■□□□□ 0.37
HIF3A-202ENST00000244303 CWF19L2Q2TBE0 894 aaKnown RBP17.38■□□□□ 0.37
HIF3A-202ENST00000244303 KSR2Q6VAB6 950 aa17.38■□□□□ 0.37
HIF3A-202ENST00000244303 RAPGEF4Q8WZA2 1011 aa17.38■□□□□ 0.37
HIF3A-202ENST00000244303 SPG7Q9UQ90 795 aa17.38■□□□□ 0.37
HIF3A-202ENST00000244303 LRSAM1Q6UWE0 723 aa17.37■□□□□ 0.37
HIF3A-202ENST00000244303 RASEFQ8IZ41 740 aa17.37■□□□□ 0.37
HIF3A-202ENST00000244303 CLASRPQ8N2M8 674 aaKnown RBP17.37■□□□□ 0.37
HIF3A-202ENST00000244303 PA2G4Q9UQ80 394 aaKnown RBP17.37■□□□□ 0.37
HIF3A-202ENST00000244303 FOXD4L6Q3SYB3 417 aaPredicted RBP17.37■□□□□ 0.37
HIF3A-202ENST00000244303 FOXD4L3Q6VB84 417 aaPredicted RBP17.37■□□□□ 0.37
HIF3A-202ENST00000244303 KIAA1211Q6ZU35 1233 aa17.37■□□□□ 0.37
HIF3A-202ENST00000244303 TTC14Q96N46 770 aa17.37■□□□□ 0.37
HIF3A-202ENST00000244303 ADAMTS7Q9UKP4 1686 aa17.36■□□□□ 0.37
HIF3A-202ENST00000244303 TATP17735 454 aaPredicted RBP17.36■□□□□ 0.37
HIF3A-202ENST00000244303 WDR33Q9C0J8 1336 aaKnown RBP17.35■□□□□ 0.37
HIF3A-202ENST00000244303 LMTK3Q96Q04 1460 aa17.35■□□□□ 0.37
HIF3A-202ENST00000244303 RPAP1Q9BWH6 1393 aaPredicted RBP17.35■□□□□ 0.37
HIF3A-202ENST00000244303 AK2P54819 239 aa17.35■□□□□ 0.37
HIF3A-202ENST00000244303 DIAPH3Q9NSV4 1193 aa17.35■□□□□ 0.37
HIF3A-202ENST00000244303 TNS3Q68CZ2 1445 aa17.35■□□□□ 0.37
HIF3A-202ENST00000244303 CSB-PGBD3P0DP91 1061 aa17.35■□□□□ 0.37
HIF3A-202ENST00000244303 CHRNA2Q15822 529 aa17.35■□□□□ 0.37
HIF3A-202ENST00000244303 ECHDC1Q9NTX5 307 aa17.35■□□□□ 0.37
HIF3A-202ENST00000244303 COL18A1P39060 1754 aa17.34■□□□□ 0.37
HIF3A-202ENST00000244303 C5P01031 1676 aa17.34■□□□□ 0.37
HIF3A-202ENST00000244303 HSP90AA2PQ14568 343 aaPredicted RBP17.34■□□□□ 0.37
HIF3A-202ENST00000244303 LARP6Q9BRS8 491 aaKnown RBP17.34■□□□□ 0.37
HIF3A-202ENST00000244303 GDPD2Q9HCC8 539 aa17.34■□□□□ 0.37
HIF3A-202ENST00000244303 HYPKQ9NX55 129 aa17.34■□□□□ 0.37
HIF3A-202ENST00000244303 SPATA31A3Q5VYP0 1347 aa17.34■□□□□ 0.37
HIF3A-202ENST00000244303 IFIT2P09913 472 aaKnown RBP17.33■□□□□ 0.37
HIF3A-202ENST00000244303 ZSCAN30Q86W11 494 aa17.33■□□□□ 0.37
HIF3A-202ENST00000244303 ERC1Q8IUD2 1116 aa17.33■□□□□ 0.37
HIF3A-202ENST00000244303 PHKG2P15735 406 aa17.33■□□□□ 0.36
HIF3A-202ENST00000244303 AIMP1Q12904 312 aaKnown RBP17.33■□□□□ 0.36
HIF3A-202ENST00000244303 RUFY3Q7L099 469 aa17.33■□□□□ 0.36
HIF3A-202ENST00000244303 RUFY2Q8WXA3 655 aa17.33■□□□□ 0.36
HIF3A-202ENST00000244303 GPATCH3Q96I76 525 aa17.33■□□□□ 0.36
HIF3A-202ENST00000244303 GRM8O00222 908 aa17.32■□□□□ 0.36
HIF3A-202ENST00000244303 CPA1P15085 419 aa17.32■□□□□ 0.36
HIF3A-202ENST00000244303 CASTP20810 708 aaKnown RBP17.32■□□□□ 0.36
HIF3A-202ENST00000244303 PTH1RQ03431 593 aa17.32■□□□□ 0.36
HIF3A-202ENST00000244303 LINS1Q8NG48 757 aa17.32■□□□□ 0.36
HIF3A-202ENST00000244303 KAZALD1Q96I82 304 aa17.32■□□□□ 0.36
HIF3A-202ENST00000244303 SUCLG2Q96I99 432 aa17.32■□□□□ 0.36
HIF3A-202ENST00000244303 PDLIM2Q96JY6 352 aa17.32■□□□□ 0.36
HIF3A-202ENST00000244303 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.32■□□□□ 0.36
HIF3A-202ENST00000244303 LIMCH1Q9UPQ0 1083 aa17.32■□□□□ 0.36
HIF3A-202ENST00000244303 HDAC5Q9UQL6 1122 aa17.32■□□□□ 0.36
HIF3A-202ENST00000244303 SCN11AQ9UI33 1791 aa17.32■□□□□ 0.36
HIF3A-202ENST00000244303 GADD45BO75293 160 aaPredicted RBP17.32■□□□□ 0.36
HIF3A-202ENST00000244303 AACSQ86V21 672 aa17.32■□□□□ 0.36
HIF3A-202ENST00000244303 SLC52A2Q9HAB3 445 aa17.32■□□□□ 0.36
HIF3A-202ENST00000244303 DDX21Q9NR30 783 aaKnown RBP eCLIP17.32■□□□□ 0.36
HIF3A-202ENST00000244303 KDM6AO15550 1401 aaPredicted RBP17.31■□□□□ 0.36
HIF3A-202ENST00000244303 MEGF6O75095 1541 aa17.31■□□□□ 0.36
HIF3A-202ENST00000244303 USP48Q86UV5 1035 aa17.31■□□□□ 0.36
HIF3A-202ENST00000244303 BICC1Q9H694 974 aaKnown RBP17.31■□□□□ 0.36
HIF3A-202ENST00000244303 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.31■□□□□ 0.36
HIF3A-202ENST00000244303 DDX58O95786 925 aaKnown RBP17.31■□□□□ 0.36
HIF3A-202ENST00000244303 SLC39A6Q13433 755 aa17.31■□□□□ 0.36
HIF3A-202ENST00000244303 PDIA6Q15084 440 aa17.31■□□□□ 0.36
HIF3A-202ENST00000244303 ZNF790Q6PG37 636 aa17.31■□□□□ 0.36
HIF3A-202ENST00000244303 UTYO14607 1347 aa17.31■□□□□ 0.36
HIF3A-202ENST00000244303 SASH1O94885 1247 aa17.3■□□□□ 0.36
HIF3A-202ENST00000244303 IFNL2Q8IZJ0 200 aa17.3■□□□□ 0.36
HIF3A-202ENST00000244303 EVI5LQ96CN4 794 aa17.3■□□□□ 0.36
HIF3A-202ENST00000244303 LARGE1O95461 756 aa17.3■□□□□ 0.36
HIF3A-202ENST00000244303 ADCK5Q3MIX3 580 aa17.3■□□□□ 0.36
HIF3A-202ENST00000244303 PRPF40BQ6NWY9 871 aaKnown RBP17.3■□□□□ 0.36
HIF3A-202ENST00000244303 NFATC2IPQ8NCF5 419 aa17.3■□□□□ 0.36
HIF3A-202ENST00000244303 SYAP1Q96A49 352 aaPredicted RBP17.3■□□□□ 0.36
HIF3A-202ENST00000244303 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.3■□□□□ 0.36
HIF3A-202ENST00000244303 RRP9O43818 475 aaKnown RBP17.29■□□□□ 0.36
HIF3A-202ENST00000244303 MSNP26038 577 aaKnown RBP17.29■□□□□ 0.36
HIF3A-202ENST00000244303 BRINP3Q76B58 766 aa17.29■□□□□ 0.36
HIF3A-202ENST00000244303 ZSCAN22P10073 491 aaPredicted RBP17.28■□□□□ 0.36
HIF3A-202ENST00000244303 RNF214Q8ND24 703 aa17.28■□□□□ 0.36
HIF3A-202ENST00000244303 EAF2Q96CJ1 260 aaPredicted RBP17.28■□□□□ 0.36
HIF3A-202ENST00000244303 JAKMIP1Q96N16 626 aaKnown RBP17.28■□□□□ 0.36
HIF3A-202ENST00000244303 CPDO75976 1380 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms