RNA–Protein interactions for RNA: ENST00000241051.7

DEPDC7-201, Transcript of DEP domain containing 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC7, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-201ENST00000241051 MYD88Q99836 296 aa18.73■□□□□ 0.59
DEPDC7-201ENST00000241051 N4BP2Q86UW6 1770 aaPredicted RBP18.73■□□□□ 0.59
DEPDC7-201ENST00000241051 IGKV5-2P06315 115 aa18.73■□□□□ 0.59
DEPDC7-201ENST00000241051 IL6STP40189 918 aaPredicted RBP18.73■□□□□ 0.59
DEPDC7-201ENST00000241051 CWF19L2Q2TBE0 894 aaKnown RBP18.73■□□□□ 0.59
DEPDC7-201ENST00000241051 TRIM37O94972 964 aa18.72■□□□□ 0.59
DEPDC7-201ENST00000241051 GNAI2P04899 355 aa18.72■□□□□ 0.59
DEPDC7-201ENST00000241051 CICQ96RK0 1608 aaPredicted RBP18.72■□□□□ 0.59
DEPDC7-201ENST00000241051 KCNQ4P56696 695 aa18.71■□□□□ 0.59
DEPDC7-201ENST00000241051 KIF6Q6ZMV9 814 aa18.71■□□□□ 0.59
DEPDC7-201ENST00000241051 LINC00116Q8NCU8 138 aa18.71■□□□□ 0.59
DEPDC7-201ENST00000241051 ZBTB3Q9H5J0 574 aa18.71■□□□□ 0.59
DEPDC7-201ENST00000241051 ZNF831Q5JPB2 1677 aa18.71■□□□□ 0.59
DEPDC7-201ENST00000241051 NEURL1BA8MQ27 555 aa18.7■□□□□ 0.58
DEPDC7-201ENST00000241051 UBTFL1P0CB47 393 aaPredicted RBP18.7■□□□□ 0.58
DEPDC7-201ENST00000241051 ARXQ96QS3 562 aa18.7■□□□□ 0.58
DEPDC7-201ENST00000241051 CCNL1Q9UK58 526 aaPredicted RBP18.7■□□□□ 0.58
DEPDC7-201ENST00000241051 EIF5P55010 431 aaKnown RBP18.7■□□□□ 0.58
DEPDC7-201ENST00000241051 NPM2Q86SE8 214 aaKnown RBP18.7■□□□□ 0.58
DEPDC7-201ENST00000241051 SIRT2Q8IXJ6 389 aa18.7■□□□□ 0.58
DEPDC7-201ENST00000241051 RPAP2Q8IXW5 612 aaPredicted RBP18.7■□□□□ 0.58
DEPDC7-201ENST00000241051 C9orf78Q9NZ63 289 aaPredicted RBP18.7■□□□□ 0.58
DEPDC7-201ENST00000241051 NBPF7P0C2Y1 421 aaPredicted RBP18.69■□□□□ 0.58
DEPDC7-201ENST00000241051 CEP85Q6P2H3 762 aa18.69■□□□□ 0.58
DEPDC7-201ENST00000241051 ANKRD44Q8N8A2 993 aa18.69■□□□□ 0.58
DEPDC7-201ENST00000241051 ATP5J2-PTCD1G3V325 749 aa18.68■□□□□ 0.58
DEPDC7-201ENST00000241051 MAP3K15Q6ZN16 1313 aa18.68■□□□□ 0.58
DEPDC7-201ENST00000241051 IBTKQ9P2D0 1353 aaPredicted RBP18.68■□□□□ 0.58
DEPDC7-201ENST00000241051 LRRFIP2Q9Y608 721 aaKnown RBP18.68■□□□□ 0.58
DEPDC7-201ENST00000241051 GCKRQ14397 625 aa18.68■□□□□ 0.58
DEPDC7-201ENST00000241051 CNTNAP4Q9C0A0 1308 aa18.67■□□□□ 0.58
DEPDC7-201ENST00000241051 GRM8O00222 908 aa18.67■□□□□ 0.58
DEPDC7-201ENST00000241051 RC3H1Q5TC82 1133 aaKnown RBP18.67■□□□□ 0.58
DEPDC7-201ENST00000241051 TSHZ2Q9NRE2 1034 aa18.67■□□□□ 0.58
DEPDC7-201ENST00000241051 ARFGEF2Q9Y6D5 1785 aa18.67■□□□□ 0.58
DEPDC7-201ENST00000241051 UTYO14607 1347 aa18.66■□□□□ 0.58
DEPDC7-201ENST00000241051 TCIRG1Q13488 830 aa18.66■□□□□ 0.58
DEPDC7-201ENST00000241051 DZIP3Q86Y13 1208 aaKnown RBP18.66■□□□□ 0.58
DEPDC7-201ENST00000241051 TBC1D2BQ9UPU7 963 aa18.66■□□□□ 0.58
DEPDC7-201ENST00000241051 RREB1Q92766 1687 aa18.66■□□□□ 0.58
DEPDC7-201ENST00000241051 COL5A3P25940 1745 aaPredicted RBP18.66■□□□□ 0.58
DEPDC7-201ENST00000241051 ERVV-1B6SEH8 477 aa18.65■□□□□ 0.58
DEPDC7-201ENST00000241051 HDAC5Q9UQL6 1122 aa18.65■□□□□ 0.58
DEPDC7-201ENST00000241051 LY75O60449 1722 aa18.65■□□□□ 0.58
DEPDC7-201ENST00000241051 NUP188Q5SRE5 1749 aa18.65■□□□□ 0.58
DEPDC7-201ENST00000241051 HLFQ16534 295 aa18.65■□□□□ 0.58
DEPDC7-201ENST00000241051 GIGYF2Q6Y7W6 1299 aaKnown RBP18.65■□□□□ 0.58
DEPDC7-201ENST00000241051 ATP8B2P98198 1209 aa18.64■□□□□ 0.57
DEPDC7-201ENST00000241051 SMC5Q8IY18 1101 aa18.64■□□□□ 0.57
DEPDC7-201ENST00000241051 ISCA1Q9BUE6 129 aa18.64■□□□□ 0.57
DEPDC7-201ENST00000241051 MYH14Q7Z406 1995 aaKnown RBP18.64■□□□□ 0.57
DEPDC7-201ENST00000241051 CCDC191Q8NCU4 936 aa18.63■□□□□ 0.57
DEPDC7-201ENST00000241051 CWC25Q9NXE8 425 aaPredicted RBP18.63■□□□□ 0.57
DEPDC7-201ENST00000241051 HMMRO75330 724 aa18.63■□□□□ 0.57
DEPDC7-201ENST00000241051 TRIM28Q13263 835 aaKnown RBP18.63■□□□□ 0.57
DEPDC7-201ENST00000241051 HSP90AB3PQ58FF7 597 aa18.63■□□□□ 0.57
DEPDC7-201ENST00000241051 SLC27A3Q5K4L6 730 aa18.63■□□□□ 0.57
DEPDC7-201ENST00000241051 LRRC4BQ9NT99 713 aa18.63■□□□□ 0.57
DEPDC7-201ENST00000241051 A0A087WZG4 1122 aa18.62■□□□□ 0.57
DEPDC7-201ENST00000241051 RPS6KA4O75676 772 aa18.62■□□□□ 0.57
DEPDC7-201ENST00000241051 GCC1Q96CN9 775 aa18.62■□□□□ 0.57
DEPDC7-201ENST00000241051 ILDR1Q86SU0 546 aaPredicted RBP18.61■□□□□ 0.57
DEPDC7-201ENST00000241051 SKAP1Q86WV1 359 aa18.61■□□□□ 0.57
DEPDC7-201ENST00000241051 SUCLG2Q96I99 432 aa18.61■□□□□ 0.57
DEPDC7-201ENST00000241051 DCTPP1Q9H773 170 aa18.61■□□□□ 0.57
DEPDC7-201ENST00000241051 PDZRN3Q9UPQ7 1066 aa18.61■□□□□ 0.57
DEPDC7-201ENST00000241051 COL15A1P39059 1388 aa18.61■□□□□ 0.57
DEPDC7-201ENST00000241051 PNMA6EA0A0J9YXQ4 647 aa18.6■□□□□ 0.57
DEPDC7-201ENST00000241051 CAMTA2O94983 1202 aa18.6■□□□□ 0.57
DEPDC7-201ENST00000241051 APBA3O96018 575 aa18.6■□□□□ 0.57
DEPDC7-201ENST00000241051 JARID2Q92833 1246 aaPredicted RBP18.6■□□□□ 0.57
DEPDC7-201ENST00000241051 H7C1W4 665 aa18.6■□□□□ 0.57
DEPDC7-201ENST00000241051 PLSCR1O15162 318 aa18.6■□□□□ 0.57
DEPDC7-201ENST00000241051 GNPATO15228 680 aa18.6■□□□□ 0.57
DEPDC7-201ENST00000241051 UBE3BQ7Z3V4 1068 aa18.6■□□□□ 0.57
DEPDC7-201ENST00000241051 KAZALD1Q96I82 304 aa18.6■□□□□ 0.57
DEPDC7-201ENST00000241051 CASP7P55210 303 aa18.59■□□□□ 0.57
DEPDC7-201ENST00000241051 PPP1R42Q7Z4L9 355 aa18.59■□□□□ 0.57
DEPDC7-201ENST00000241051 RTCBQ9Y3I0 505 aaKnown RBP18.59■□□□□ 0.57
DEPDC7-201ENST00000241051 AFDNP55196 1824 aaKnown RBP18.59■□□□□ 0.57
DEPDC7-201ENST00000241051 EP400Q96L91 3159 aa18.59■□□□□ 0.57
DEPDC7-201ENST00000241051 GPTP24298 496 aa18.58■□□□□ 0.57
DEPDC7-201ENST00000241051 TXNRD1Q16881 649 aa18.58■□□□□ 0.57
DEPDC7-201ENST00000241051 PROM2Q8N271 834 aa18.58■□□□□ 0.57
DEPDC7-201ENST00000241051 POLA2Q14181 598 aa18.58■□□□□ 0.56
DEPDC7-201ENST00000241051 SMIM5Q71RC9 77 aa18.58■□□□□ 0.56
DEPDC7-201ENST00000241051 NLRP10Q86W26 655 aa18.58■□□□□ 0.56
DEPDC7-201ENST00000241051 ZNF34Q8IZ26 560 aa18.58■□□□□ 0.56
DEPDC7-201ENST00000241051 SSH3Q8TE77 659 aa18.58■□□□□ 0.56
DEPDC7-201ENST00000241051 AK7Q96M32 723 aa18.58■□□□□ 0.56
DEPDC7-201ENST00000241051 BICC1Q9H694 974 aaKnown RBP18.58■□□□□ 0.56
DEPDC7-201ENST00000241051 SRGAP3O43295 1099 aa18.57■□□□□ 0.56
DEPDC7-201ENST00000241051 NUCB1Q02818 461 aa18.57■□□□□ 0.56
DEPDC7-201ENST00000241051 MTX1Q13505 466 aa18.57■□□□□ 0.56
DEPDC7-201ENST00000241051 TAF1LQ8IZX4 1826 aa18.57■□□□□ 0.56
DEPDC7-201ENST00000241051 C4BP0C0L5 1744 aa18.56■□□□□ 0.56
DEPDC7-201ENST00000241051 HMGB2P26583 209 aaKnown RBP18.56■□□□□ 0.56
DEPDC7-201ENST00000241051 ANKRD45Q5TZF3 282 aa18.56■□□□□ 0.56
DEPDC7-201ENST00000241051 RTL5Q5HYW3 569 aaPredicted RBP18.55■□□□□ 0.56
DEPDC7-201ENST00000241051 EPHA10Q5JZY3 1008 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms