RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 CEP89Q96ST8 783 aa11.06□□□□□ -0.64
NUDCD1-201ENST00000239690 ZNF215Q9UL58 517 aaPredicted RBP11.06□□□□□ -0.64
NUDCD1-201ENST00000239690 PYCARDQ9ULZ3 195 aa11.06□□□□□ -0.64
NUDCD1-201ENST00000239690 ABCC2Q92887 1545 aa11.06□□□□□ -0.64
NUDCD1-201ENST00000239690 ITSN2Q9NZM3 1697 aa11.06□□□□□ -0.64
NUDCD1-201ENST00000239690 CSB-PGBD3P0DP91 1061 aa11.06□□□□□ -0.64
NUDCD1-201ENST00000239690 EVI5LQ96CN4 794 aa11.06□□□□□ -0.64
NUDCD1-201ENST00000239690 MAGEC2Q9UBF1 373 aaPredicted RBP11.06□□□□□ -0.64
NUDCD1-201ENST00000239690 EMILIN1Q9Y6C2 1016 aa11.06□□□□□ -0.64
NUDCD1-201ENST00000239690 EVCP57679 992 aa11.06□□□□□ -0.64
NUDCD1-201ENST00000239690 FLIIQ13045 1269 aa11.06□□□□□ -0.64
NUDCD1-201ENST00000239690 ZSCAN25Q6NSZ9 544 aa11.06□□□□□ -0.64
NUDCD1-201ENST00000239690 MICALCLQ6ZW33 695 aa11.06□□□□□ -0.64
NUDCD1-201ENST00000239690 CHAMP1Q96JM3 812 aa11.06□□□□□ -0.64
NUDCD1-201ENST00000239690 C8orf76Q96K31 380 aa11.06□□□□□ -0.64
NUDCD1-201ENST00000239690 VPS18Q9P253 973 aa11.06□□□□□ -0.64
NUDCD1-201ENST00000239690 ABCA5Q8WWZ7 1642 aa11.06□□□□□ -0.64
NUDCD1-201ENST00000239690 A2MP01023 1474 aa11.06□□□□□ -0.64
NUDCD1-201ENST00000239690 HMGB1P09429 215 aaKnown RBP11.05□□□□□ -0.64
NUDCD1-201ENST00000239690 ZNF692Q9BU19 519 aaPredicted RBP11.05□□□□□ -0.64
NUDCD1-201ENST00000239690 FAM83GA6ND36 823 aa11.05□□□□□ -0.64
NUDCD1-201ENST00000239690 CDKL5O76039 1030 aa11.05□□□□□ -0.64
NUDCD1-201ENST00000239690 GSPT1P15170 499 aaKnown RBP11.05□□□□□ -0.64
NUDCD1-201ENST00000239690 SYCP1Q15431 976 aa11.05□□□□□ -0.64
NUDCD1-201ENST00000239690 MICALL1Q8N3F8 863 aa11.05□□□□□ -0.64
NUDCD1-201ENST00000239690 RHPN1Q8TCX5 695 aa11.05□□□□□ -0.64
NUDCD1-201ENST00000239690 BOLA2Q9H3K6 86 aa11.05□□□□□ -0.64
NUDCD1-201ENST00000239690 BRMS1Q9HCU9 246 aa11.05□□□□□ -0.64
NUDCD1-201ENST00000239690 HMG20BQ9P0W2 317 aa11.05□□□□□ -0.64
NUDCD1-201ENST00000239690 IFT140Q96RY7 1462 aa11.04□□□□□ -0.64
NUDCD1-201ENST00000239690 GOLGA6L7A0A1B0GV03 622 aa11.04□□□□□ -0.64
NUDCD1-201ENST00000239690 LRMPQ12912 555 aa11.04□□□□□ -0.64
NUDCD1-201ENST00000239690 VPS53Q5VIR6 699 aa11.04□□□□□ -0.64
NUDCD1-201ENST00000239690 KIAA1328Q86T90 577 aa11.04□□□□□ -0.64
NUDCD1-201ENST00000239690 MRPS27Q92552 414 aaKnown RBP11.04□□□□□ -0.64
NUDCD1-201ENST00000239690 TUBB4BP68371 445 aa11.04□□□□□ -0.64
NUDCD1-201ENST00000239690 CCDC91Q7Z6B0 441 aa11.04□□□□□ -0.64
NUDCD1-201ENST00000239690 ZSCAN26Q16670 478 aa11.04□□□□□ -0.64
NUDCD1-201ENST00000239690 PPP1R42Q7Z4L9 355 aa11.04□□□□□ -0.64
NUDCD1-201ENST00000239690 TTC5Q8N0Z6 440 aa11.04□□□□□ -0.64
NUDCD1-201ENST00000239690 RAI14Q9P0K7 980 aa11.04□□□□□ -0.64
NUDCD1-201ENST00000239690 IFNKQ9P0W0 207 aa11.04□□□□□ -0.64
NUDCD1-201ENST00000239690 CTNNA3Q9UI47 895 aa11.04□□□□□ -0.64
NUDCD1-201ENST00000239690 U3KPZ7 1027 aaPredicted RBP11.04□□□□□ -0.64
NUDCD1-201ENST00000239690 ATP2B3Q16720 1220 aa11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 CLEC17AQ6ZS10 378 aa11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 NBPF11Q86T75 865 aa11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 TCEANC2Q96MN5 208 aa11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 CLSTN2Q9H4D0 955 aa11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 C14orf93Q9H972 538 aaKnown RBP11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 RBM8AQ9Y5S9 174 aaKnown RBP11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 USP16Q9Y5T5 823 aa11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 RTEL1-TNFRSF6BF6WH68 1400 aa11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 LMOD1P29536 600 aaPredicted RBP11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 ATP8B2P98198 1209 aa11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 SART3Q15020 963 aaKnown RBP11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 CEP112Q8N8E3 955 aa11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 BRF1Q92994 677 aa11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 CTAGE15A4D2H0 777 aa11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 CTAGE8P0CG41 777 aa11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 IBSPP21815 317 aaPredicted RBP11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 RNF187Q5TA31 235 aaPredicted RBP11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 CTAGE6Q86UF2 777 aa11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 CTAGE4Q8IX94 777 aa11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 TRIM22Q8IYM9 498 aa11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 CPLX3Q8WVH0 158 aa11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 TRIM35Q9UPQ4 493 aa11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 KDM6BO15054 1643 aa11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 ADGRL2O95490 1459 aa11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 NUP153P49790 1475 aaKnown RBP11.03□□□□□ -0.64
NUDCD1-201ENST00000239690 EBAG9O00559 213 aa11.02□□□□□ -0.64
NUDCD1-201ENST00000239690 FYB1O15117 783 aa11.02□□□□□ -0.64
NUDCD1-201ENST00000239690 MARCH6O60337 910 aa11.02□□□□□ -0.64
NUDCD1-201ENST00000239690 TUBBP07437 444 aa11.02□□□□□ -0.64
NUDCD1-201ENST00000239690 CT47A1Q5JQC4 288 aaPredicted RBP11.02□□□□□ -0.64
NUDCD1-201ENST00000239690 ISM2Q6H9L7 571 aa11.02□□□□□ -0.64
NUDCD1-201ENST00000239690 CNNM3Q8NE01 707 aa11.02□□□□□ -0.64
NUDCD1-201ENST00000239690 NEK1Q96PY6 1258 aa11.02□□□□□ -0.64
NUDCD1-201ENST00000239690 MYO6Q9UM54 1294 aa11.02□□□□□ -0.64
NUDCD1-201ENST00000239690 TXLNAP40222 546 aa11.02□□□□□ -0.65
NUDCD1-201ENST00000239690 CCT2P78371 535 aaKnown RBP11.02□□□□□ -0.65
NUDCD1-201ENST00000239690 ODF2Q5BJF6 829 aa11.02□□□□□ -0.65
NUDCD1-201ENST00000239690 SLC26A8Q96RN1 970 aa11.02□□□□□ -0.65
NUDCD1-201ENST00000239690 CARD6Q9BX69 1037 aa11.02□□□□□ -0.65
NUDCD1-201ENST00000239690 LIG1P18858 919 aa11.01□□□□□ -0.65
NUDCD1-201ENST00000239690 OAS2P29728 719 aaKnown RBP11.01□□□□□ -0.65
NUDCD1-201ENST00000239690 ERCC6LQ2NKX8 1250 aa11.01□□□□□ -0.65
NUDCD1-201ENST00000239690 HDXQ7Z353 690 aa11.01□□□□□ -0.65
NUDCD1-201ENST00000239690 STK11IPQ8N1F8 1099 aa11.01□□□□□ -0.65
NUDCD1-201ENST00000239690 LUC7LQ9NQ29 371 aaKnown RBP11.01□□□□□ -0.65
NUDCD1-201ENST00000239690 SLC52A1Q9NWF4 448 aa11.01□□□□□ -0.65
NUDCD1-201ENST00000239690 SHANK2Q9UPX8 1470 aa11.01□□□□□ -0.65
NUDCD1-201ENST00000239690 PHACTR2O75167 634 aa11.01□□□□□ -0.65
NUDCD1-201ENST00000239690 STIM1Q13586 685 aa11.01□□□□□ -0.65
NUDCD1-201ENST00000239690 PPM1EQ8WY54 764 aa11.01□□□□□ -0.65
NUDCD1-201ENST00000239690 NOS1P29475 1434 aa11.01□□□□□ -0.65
NUDCD1-201ENST00000239690 MAGI2Q86UL8 1455 aa11.01□□□□□ -0.65
NUDCD1-201ENST00000239690 NLRP6P59044 892 aa11.01□□□□□ -0.65
NUDCD1-201ENST00000239690 PPP2R3AQ06190 1150 aa11.01□□□□□ -0.65
NUDCD1-201ENST00000239690 KLHL10Q6JEL2 608 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms