RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 LINS1Q8NG48 757 aa23.34■■□□□ 1.33
SNX17-201ENST00000233575 PLBD2Q8NHP8 589 aa23.34■■□□□ 1.33
SNX17-201ENST00000233575 RGS17Q9UGC6 210 aaPredicted RBP23.34■■□□□ 1.33
SNX17-201ENST00000233575 GNAI2P04899 355 aa23.33■■□□□ 1.33
SNX17-201ENST00000233575 ZBTB3Q9H5J0 574 aa23.33■■□□□ 1.33
SNX17-201ENST00000233575 CICQ96RK0 1608 aaPredicted RBP23.33■■□□□ 1.33
SNX17-201ENST00000233575 ALDH1L1O75891 902 aa23.33■■□□□ 1.32
SNX17-201ENST00000233575 LRRFIP2Q9Y608 721 aaKnown RBP23.33■■□□□ 1.32
SNX17-201ENST00000233575 UBTFL1P0CB47 393 aaPredicted RBP23.32■■□□□ 1.32
SNX17-201ENST00000233575 ANKRD44Q8N8A2 993 aa23.32■■□□□ 1.32
SNX17-201ENST00000233575 MYH14Q7Z406 1995 aaKnown RBP23.32■■□□□ 1.32
SNX17-201ENST00000233575 NEURL1BA8MQ27 555 aa23.31■■□□□ 1.32
SNX17-201ENST00000233575 INTS5Q6P9B9 1019 aaKnown RBP23.31■■□□□ 1.32
SNX17-201ENST00000233575 COL5A3P25940 1745 aaPredicted RBP23.31■■□□□ 1.32
SNX17-201ENST00000233575 ATP5J2-PTCD1G3V325 749 aa23.3■■□□□ 1.32
SNX17-201ENST00000233575 CRKLP46109 303 aaKnown RBP23.3■■□□□ 1.32
SNX17-201ENST00000233575 NEXNQ0ZGT2 675 aa23.3■■□□□ 1.32
SNX17-201ENST00000233575 SMC5Q8IY18 1101 aa23.3■■□□□ 1.32
SNX17-201ENST00000233575 RPAP2Q8IXW5 612 aaPredicted RBP23.3■■□□□ 1.32
SNX17-201ENST00000233575 PDZRN3Q9UPQ7 1066 aa23.3■■□□□ 1.32
SNX17-201ENST00000233575 AFDNP55196 1824 aaKnown RBP23.3■■□□□ 1.32
SNX17-201ENST00000233575 ZNF831Q5JPB2 1677 aa23.29■■□□□ 1.32
SNX17-201ENST00000233575 ARXQ96QS3 562 aa23.28■■□□□ 1.32
SNX17-201ENST00000233575 CCDC87Q9NVE4 849 aa23.28■■□□□ 1.32
SNX17-201ENST00000233575 C9orf78Q9NZ63 289 aaPredicted RBP23.28■■□□□ 1.32
SNX17-201ENST00000233575 RREB1Q92766 1687 aa23.28■■□□□ 1.32
SNX17-201ENST00000233575 LINC00116Q8NCU8 138 aa23.28■■□□□ 1.32
SNX17-201ENST00000233575 RXRBP28702 533 aa23.27■■□□□ 1.32
SNX17-201ENST00000233575 GCKRQ14397 625 aa23.27■■□□□ 1.32
SNX17-201ENST00000233575 POTEAQ6S8J7 498 aa23.27■■□□□ 1.32
SNX17-201ENST00000233575 GRM8O00222 908 aa23.26■■□□□ 1.31
SNX17-201ENST00000233575 RGS3P49796 1198 aa23.26■■□□□ 1.31
SNX17-201ENST00000233575 FAM196AQ6ZSG2 479 aa23.26■■□□□ 1.31
SNX17-201ENST00000233575 PNMA6EA0A0J9YXQ4 647 aa23.26■■□□□ 1.31
SNX17-201ENST00000233575 IL6STP40189 918 aaPredicted RBP23.26■■□□□ 1.31
SNX17-201ENST00000233575 BCL11BQ9C0K0 894 aaPredicted RBP23.26■■□□□ 1.31
SNX17-201ENST00000233575 LY75O60449 1722 aa23.26■■□□□ 1.31
SNX17-201ENST00000233575 JARID2Q92833 1246 aaPredicted RBP23.25■■□□□ 1.31
SNX17-201ENST00000233575 EIF5P55010 431 aaKnown RBP23.25■■□□□ 1.31
SNX17-201ENST00000233575 KIF6Q6ZMV9 814 aa23.25■■□□□ 1.31
SNX17-201ENST00000233575 UTYO14607 1347 aa23.24■■□□□ 1.31
SNX17-201ENST00000233575 TRIM37O94972 964 aa23.24■■□□□ 1.31
SNX17-201ENST00000233575 TBC1D2BQ9UPU7 963 aa23.24■■□□□ 1.31
SNX17-201ENST00000233575 MAP3K15Q6ZN16 1313 aa23.24■■□□□ 1.31
SNX17-201ENST00000233575 HLFQ16534 295 aa23.23■■□□□ 1.31
SNX17-201ENST00000233575 ATP8B2P98198 1209 aa23.23■■□□□ 1.31
SNX17-201ENST00000233575 KAZALD1Q96I82 304 aa23.23■■□□□ 1.31
SNX17-201ENST00000233575 DCTPP1Q9H773 170 aa23.23■■□□□ 1.31
SNX17-201ENST00000233575 CCNL1Q9UK58 526 aaPredicted RBP23.23■■□□□ 1.31
SNX17-201ENST00000233575 GCC1Q96CN9 775 aa23.22■■□□□ 1.31
SNX17-201ENST00000233575 SUCLG2Q96I99 432 aa23.22■■□□□ 1.31
SNX17-201ENST00000233575 DZIP3Q86Y13 1208 aaKnown RBP23.21■■□□□ 1.31
SNX17-201ENST00000233575 IBTKQ9P2D0 1353 aaPredicted RBP23.21■■□□□ 1.31
SNX17-201ENST00000233575 NUCB1Q02818 461 aa23.2■■□□□ 1.3
SNX17-201ENST00000233575 TCIRG1Q13488 830 aa23.2■■□□□ 1.3
SNX17-201ENST00000233575 SMIM5Q71RC9 77 aa23.2■■□□□ 1.3
SNX17-201ENST00000233575 PPP1R42Q7Z4L9 355 aa23.2■■□□□ 1.3
SNX17-201ENST00000233575 A0A087WZG4 1122 aa23.2■■□□□ 1.3
SNX17-201ENST00000233575 HMMRO75330 724 aa23.2■■□□□ 1.3
SNX17-201ENST00000233575 ISCA1Q9BUE6 129 aa23.2■■□□□ 1.3
SNX17-201ENST00000233575 TAF1LQ8IZX4 1826 aa23.19■■□□□ 1.3
SNX17-201ENST00000233575 NUP98P52948 1817 aa23.19■■□□□ 1.3
SNX17-201ENST00000233575 PDE4AP27815 886 aa23.19■■□□□ 1.3
SNX17-201ENST00000233575 ANKRD45Q5TZF3 282 aa23.19■■□□□ 1.3
SNX17-201ENST00000233575 GIGYF2Q6Y7W6 1299 aaKnown RBP23.19■■□□□ 1.3
SNX17-201ENST00000233575 UBE3BQ7Z3V4 1068 aa23.19■■□□□ 1.3
SNX17-201ENST00000233575 LNPKQ9C0E8 428 aa23.19■■□□□ 1.3
SNX17-201ENST00000233575 RTL5Q5HYW3 569 aaPredicted RBP23.18■■□□□ 1.3
SNX17-201ENST00000233575 NPM2Q86SE8 214 aaKnown RBP23.18■■□□□ 1.3
SNX17-201ENST00000233575 BICC1Q9H694 974 aaKnown RBP23.18■■□□□ 1.3
SNX17-201ENST00000233575 CWC25Q9NXE8 425 aaPredicted RBP23.18■■□□□ 1.3
SNX17-201ENST00000233575 CASP7P55210 303 aa23.18■■□□□ 1.3
SNX17-201ENST00000233575 EPHA10Q5JZY3 1008 aa23.18■■□□□ 1.3
SNX17-201ENST00000233575 CNTNAP4Q9C0A0 1308 aa23.17■■□□□ 1.3
SNX17-201ENST00000233575 APBB1O00213 710 aa23.17■■□□□ 1.3
SNX17-201ENST00000233575 SRGAP3O43295 1099 aa23.17■■□□□ 1.3
SNX17-201ENST00000233575 CHD1LQ86WJ1 897 aa23.17■■□□□ 1.3
SNX17-201ENST00000233575 SSH3Q8TE77 659 aa23.17■■□□□ 1.3
SNX17-201ENST00000233575 LRRC4BQ9NT99 713 aa23.17■■□□□ 1.3
SNX17-201ENST00000233575 COL15A1P39059 1388 aa23.17■■□□□ 1.3
SNX17-201ENST00000233575 GPTP24298 496 aa23.16■■□□□ 1.3
SNX17-201ENST00000233575 CCDC191Q8NCU4 936 aa23.16■■□□□ 1.3
SNX17-201ENST00000233575 EXOC6BQ9Y2D4 811 aa23.16■■□□□ 1.3
SNX17-201ENST00000233575 ANKRD36CQ5JPF3 1778 aa23.16■■□□□ 1.3
SNX17-201ENST00000233575 POLA2Q14181 598 aa23.16■■□□□ 1.3
SNX17-201ENST00000233575 ERVV-1B6SEH8 477 aa23.15■■□□□ 1.3
SNX17-201ENST00000233575 H7C1W4 665 aa23.15■■□□□ 1.3
SNX17-201ENST00000233575 MTX1Q13505 466 aa23.15■■□□□ 1.3
SNX17-201ENST00000233575 AMIGO3Q86WK7 504 aa23.15■■□□□ 1.3
SNX17-201ENST00000233575 BCL11AQ9H165 835 aa23.15■■□□□ 1.3
SNX17-201ENST00000233575 CAMTA2O94983 1202 aa23.14■■□□□ 1.29
SNX17-201ENST00000233575 TSHZ2Q9NRE2 1034 aa23.13■■□□□ 1.29
SNX17-201ENST00000233575 C4BP0C0L5 1744 aa23.13■■□□□ 1.29
SNX17-201ENST00000233575 SMARCA5O60264 1052 aaPredicted RBP23.13■■□□□ 1.29
SNX17-201ENST00000233575 TRIM28Q13263 835 aaKnown RBP23.13■■□□□ 1.29
SNX17-201ENST00000233575 RC3H1Q5TC82 1133 aaKnown RBP23.13■■□□□ 1.29
SNX17-201ENST00000233575 HDAC5Q9UQL6 1122 aa23.13■■□□□ 1.29
SNX17-201ENST00000233575 GNPATO15228 680 aa23.12■■□□□ 1.29
SNX17-201ENST00000233575 UBN2Q6ZU65 1347 aa23.11■■□□□ 1.29
SNX17-201ENST00000233575 HSP90AB3PQ58FF7 597 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms