RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 MAP4K4O95819 1239 aaPredicted RBP17.69■□□□□ 0.42
PRKAB1-201ENST00000229328 OS9Q13438 667 aaPredicted RBP17.69■□□□□ 0.42
PRKAB1-201ENST00000229328 NBPF14Q5TI25 921 aa17.69■□□□□ 0.42
PRKAB1-201ENST00000229328 NBPF10Q6P3W6 841 aaKnown RBP17.69■□□□□ 0.42
PRKAB1-201ENST00000229328 NBPF15Q8N660 670 aa17.69■□□□□ 0.42
PRKAB1-201ENST00000229328 JARID2Q92833 1246 aaPredicted RBP17.69■□□□□ 0.42
PRKAB1-201ENST00000229328 PTCD1O75127 700 aaKnown RBP17.68■□□□□ 0.42
PRKAB1-201ENST00000229328 HSP90AB4PQ58FF6 505 aa17.68■□□□□ 0.42
PRKAB1-201ENST00000229328 KCPQ6ZWJ8 1503 aa17.68■□□□□ 0.42
PRKAB1-201ENST00000229328 CHMLP26374 656 aa17.68■□□□□ 0.42
PRKAB1-201ENST00000229328 EPHA10Q5JZY3 1008 aa17.68■□□□□ 0.42
PRKAB1-201ENST00000229328 REC8O95072 547 aa17.68■□□□□ 0.42
PRKAB1-201ENST00000229328 ESYT1Q9BSJ8 1104 aa17.68■□□□□ 0.42
PRKAB1-201ENST00000229328 HDAC5Q9UQL6 1122 aa17.68■□□□□ 0.42
PRKAB1-201ENST00000229328 LAMB4A4D0S4 1761 aa17.67■□□□□ 0.42
PRKAB1-201ENST00000229328 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.67■□□□□ 0.42
PRKAB1-201ENST00000229328 UBR2Q8IWV8 1755 aa17.67■□□□□ 0.42
PRKAB1-201ENST00000229328 ATP5J2-PTCD1G3V325 749 aa17.67■□□□□ 0.42
PRKAB1-201ENST00000229328 ROBO1Q9Y6N7 1651 aa17.67■□□□□ 0.42
PRKAB1-201ENST00000229328 A1BGP04217 495 aa17.66■□□□□ 0.42
PRKAB1-201ENST00000229328 PAPPAQ13219 1627 aa17.66■□□□□ 0.42
PRKAB1-201ENST00000229328 TOGARAM1Q9Y4F4 1720 aa17.66■□□□□ 0.42
PRKAB1-201ENST00000229328 K7ELQ4 463 aaPredicted RBP17.65■□□□□ 0.42
PRKAB1-201ENST00000229328 DDIT3P35638 169 aa17.65■□□□□ 0.42
PRKAB1-201ENST00000229328 KLHDC4Q8TBB5 520 aa17.65■□□□□ 0.42
PRKAB1-201ENST00000229328 ARFGEF2Q9Y6D5 1785 aa17.65■□□□□ 0.42
PRKAB1-201ENST00000229328 RABEP1Q15276 862 aa17.65■□□□□ 0.42
PRKAB1-201ENST00000229328 TTLL7Q6ZT98 887 aa17.65■□□□□ 0.42
PRKAB1-201ENST00000229328 IL25Q9H293 177 aa17.65■□□□□ 0.42
PRKAB1-201ENST00000229328 CHMP5Q9NZZ3 219 aa17.65■□□□□ 0.42
PRKAB1-201ENST00000229328 SASH1O94885 1247 aa17.64■□□□□ 0.41
PRKAB1-201ENST00000229328 PLBD2Q8NHP8 589 aa17.64■□□□□ 0.41
PRKAB1-201ENST00000229328 FOXD4L1Q9NU39 408 aa17.64■□□□□ 0.41
PRKAB1-201ENST00000229328 CLASRPQ8N2M8 674 aaKnown RBP17.64■□□□□ 0.41
PRKAB1-201ENST00000229328 TNS2Q63HR2 1409 aa17.64■□□□□ 0.41
PRKAB1-201ENST00000229328 SIL1Q9H173 461 aa17.63■□□□□ 0.41
PRKAB1-201ENST00000229328 USP42Q9H9J4 1324 aaKnown RBP17.63■□□□□ 0.41
PRKAB1-201ENST00000229328 UBE3BQ7Z3V4 1068 aa17.63■□□□□ 0.41
PRKAB1-201ENST00000229328 ERBB4Q15303 1308 aa17.63■□□□□ 0.41
PRKAB1-201ENST00000229328 ERC1Q8IUD2 1116 aa17.62■□□□□ 0.41
PRKAB1-201ENST00000229328 TMOD3Q9NYL9 352 aa17.62■□□□□ 0.41
PRKAB1-201ENST00000229328 AFDNP55196 1824 aaKnown RBP17.62■□□□□ 0.41
PRKAB1-201ENST00000229328 A0A087WZG4 1122 aa17.61■□□□□ 0.41
PRKAB1-201ENST00000229328 G3BP1Q13283 466 aaKnown RBP eCLIP17.61■□□□□ 0.41
PRKAB1-201ENST00000229328 PIGBQ92521 554 aa17.61■□□□□ 0.41
PRKAB1-201ENST00000229328 ASAP1Q9ULH1 1129 aa17.61■□□□□ 0.41
PRKAB1-201ENST00000229328 AACSQ86V21 672 aa17.61■□□□□ 0.41
PRKAB1-201ENST00000229328 ANO2Q9NQ90 1003 aa17.61■□□□□ 0.41
PRKAB1-201ENST00000229328 TTC41PQ6P2S7 1318 aa17.61■□□□□ 0.41
PRKAB1-201ENST00000229328 COL14A1Q05707 1796 aaKnown RBP17.61■□□□□ 0.41
PRKAB1-201ENST00000229328 COL16A1Q07092 1604 aaPredicted RBP17.6■□□□□ 0.41
PRKAB1-201ENST00000229328 AHDC1Q5TGY3 1603 aaPredicted RBP17.6■□□□□ 0.41
PRKAB1-201ENST00000229328 EAF2Q96CJ1 260 aaPredicted RBP17.6■□□□□ 0.41
PRKAB1-201ENST00000229328 IFIT2P09913 472 aaKnown RBP17.6■□□□□ 0.41
PRKAB1-201ENST00000229328 CASP7P55210 303 aa17.6■□□□□ 0.41
PRKAB1-201ENST00000229328 PALD1Q9ULE6 856 aa17.6■□□□□ 0.41
PRKAB1-201ENST00000229328 DISP2A7MBM2 1401 aa17.6■□□□□ 0.41
PRKAB1-201ENST00000229328 ZBTB3Q9H5J0 574 aa17.59■□□□□ 0.41
PRKAB1-201ENST00000229328 ECHDC1Q9NTX5 307 aa17.59■□□□□ 0.41
PRKAB1-201ENST00000229328 GLRX3O76003 335 aaKnown RBP17.59■□□□□ 0.41
PRKAB1-201ENST00000229328 CNTROBQ8N137 903 aa17.59■□□□□ 0.41
PRKAB1-201ENST00000229328 CCDC8Q9H0W5 538 aaPredicted RBP17.59■□□□□ 0.41
PRKAB1-201ENST00000229328 TLR7Q9NYK1 1049 aaKnown RBP17.59■□□□□ 0.41
PRKAB1-201ENST00000229328 HSP90AA1P07900 732 aaKnown RBP17.58■□□□□ 0.41
PRKAB1-201ENST00000229328 RFX5P48382 616 aaPredicted RBP17.58■□□□□ 0.41
PRKAB1-201ENST00000229328 AK9Q5TCS8 1911 aa17.58■□□□□ 0.41
PRKAB1-201ENST00000229328 RABL6Q3YEC7 729 aaPredicted RBP17.58■□□□□ 0.4
PRKAB1-201ENST00000229328 LTBP4Q8N2S1 1624 aa17.58■□□□□ 0.4
PRKAB1-201ENST00000229328 COL22A1Q8NFW1 1626 aaPredicted RBP17.58■□□□□ 0.4
PRKAB1-201ENST00000229328 ANO8Q9HCE9 1232 aaPredicted RBP17.57■□□□□ 0.4
PRKAB1-201ENST00000229328 ATG3Q9NT62 314 aa17.57■□□□□ 0.4
PRKAB1-201ENST00000229328 NUP188Q5SRE5 1749 aa17.57■□□□□ 0.4
PRKAB1-201ENST00000229328 PTPN12Q05209 780 aaKnown RBP17.57■□□□□ 0.4
PRKAB1-201ENST00000229328 DNAJC10Q8IXB1 793 aa17.56■□□□□ 0.4
PRKAB1-201ENST00000229328 COL15A1P39059 1388 aa17.56■□□□□ 0.4
PRKAB1-201ENST00000229328 H7C1W4 665 aa17.56■□□□□ 0.4
PRKAB1-201ENST00000229328 COPRSQ9NQ92 184 aa17.56■□□□□ 0.4
PRKAB1-201ENST00000229328 SGSM2O43147 1006 aa17.55■□□□□ 0.4
PRKAB1-201ENST00000229328 ADAMTS2O95450 1211 aa17.55■□□□□ 0.4
PRKAB1-201ENST00000229328 GSE1Q14687 1217 aa17.55■□□□□ 0.4
PRKAB1-201ENST00000229328 MCM4P33991 863 aa17.55■□□□□ 0.4
PRKAB1-201ENST00000229328 FOXO4P98177 505 aa17.55■□□□□ 0.4
PRKAB1-201ENST00000229328 GPATCH3Q96I76 525 aa17.55■□□□□ 0.4
PRKAB1-201ENST00000229328 CWC25Q9NXE8 425 aaPredicted RBP17.55■□□□□ 0.4
PRKAB1-201ENST00000229328 ST18O60284 1047 aa17.54■□□□□ 0.4
PRKAB1-201ENST00000229328 LMBR1LQ6UX01 489 aa17.54■□□□□ 0.4
PRKAB1-201ENST00000229328 CWC27Q6UX04 472 aaKnown RBP17.54■□□□□ 0.4
PRKAB1-201ENST00000229328 ZNF330Q9Y3S2 320 aaPredicted RBP17.54■□□□□ 0.4
PRKAB1-201ENST00000229328 ITGB4P16144 1822 aa17.54■□□□□ 0.4
PRKAB1-201ENST00000229328 CIZ1Q9ULV3 898 aaPredicted RBP17.54■□□□□ 0.4
PRKAB1-201ENST00000229328 TJP1Q07157 1748 aa17.53■□□□□ 0.4
PRKAB1-201ENST00000229328 EXOC5O00471 708 aa17.53■□□□□ 0.4
PRKAB1-201ENST00000229328 MCCP23508 829 aa17.53■□□□□ 0.4
PRKAB1-201ENST00000229328 NEK4P51957 841 aa17.53■□□□□ 0.4
PRKAB1-201ENST00000229328 TFCP2Q12800 502 aa17.53■□□□□ 0.4
PRKAB1-201ENST00000229328 TNPO1Q92973 898 aaKnown RBP17.53■□□□□ 0.4
PRKAB1-201ENST00000229328 SLC4A9Q96Q91 983 aa17.52■□□□□ 0.4
PRKAB1-201ENST00000229328 RAB3GAP1Q15042 981 aa17.52■□□□□ 0.4
PRKAB1-201ENST00000229328 LSG1Q9H089 658 aaKnown RBP17.52■□□□□ 0.4
PRKAB1-201ENST00000229328 BCL9O00512 1426 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms