RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 JDP2Q8WYK2 163 aa9.55□□□□□ -0.88
NANOG-201ENST00000229307 PARD3Q8TEW0 1356 aa9.55□□□□□ -0.88
NANOG-201ENST00000229307 PI4KAP2A4QPH2 592 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 POLR3DP05423 398 aaPredicted RBP9.54□□□□□ -0.88
NANOG-201ENST00000229307 ANKRD1Q15327 319 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 COPS6Q7L5N1 327 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 PI4KAP1Q8N8J0 262 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 CCDC87Q9NVE4 849 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 STRCQ7RTU9 1775 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 ATP7BP35670 1465 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 BAG3O95817 575 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 PDE4AP27815 886 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 MCM2P49736 904 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 ARHGAP45Q92619 1136 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 SLKQ9H2G2 1235 aaPredicted RBP9.54□□□□□ -0.88
NANOG-201ENST00000229307 RTL1A6NKG5 1358 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 CCDC69A6NI79 296 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 CCDC125Q86Z20 511 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 CHPF2Q9P2E5 772 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 PDZRN3Q9UPQ7 1066 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 MTMR7Q9Y216 660 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 ATP5J2-PTCD1G3V325 749 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 KRT32Q14532 448 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 PAXIP1Q6ZW49 1069 aaPredicted RBP9.54□□□□□ -0.88
NANOG-201ENST00000229307 UBE3BQ7Z3V4 1068 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 CARD14Q9BXL6 1004 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 ANKRD2Q9GZV1 360 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 THRAP3Q9Y2W1 955 aaKnown RBP9.54□□□□□ -0.88
NANOG-201ENST00000229307 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.54□□□□□ -0.88
NANOG-201ENST00000229307 ROBO2Q9HCK4 1378 aa9.54□□□□□ -0.88
NANOG-201ENST00000229307 TPD52L1Q16890 204 aaPredicted RBP9.53□□□□□ -0.88
NANOG-201ENST00000229307 UBAC1Q9BSL1 405 aa9.53□□□□□ -0.88
NANOG-201ENST00000229307 E9PCH4 1651 aa9.53□□□□□ -0.88
NANOG-201ENST00000229307 NEURL4Q96JN8 1562 aa9.53□□□□□ -0.88
NANOG-201ENST00000229307 HOXB7P09629 217 aa9.53□□□□□ -0.88
NANOG-201ENST00000229307 ZNF804AQ7Z570 1209 aa9.53□□□□□ -0.88
NANOG-201ENST00000229307 CARD10Q9BWT7 1032 aa9.53□□□□□ -0.88
NANOG-201ENST00000229307 SPATA31E1Q6ZUB1 1445 aa9.53□□□□□ -0.88
NANOG-201ENST00000229307 CHD1LQ86WJ1 897 aa9.53□□□□□ -0.88
NANOG-201ENST00000229307 UNC5CLQ8IV45 518 aa9.53□□□□□ -0.88
NANOG-201ENST00000229307 TRIM22Q8IYM9 498 aa9.53□□□□□ -0.88
NANOG-201ENST00000229307 C1orf167Q5SNV9 1468 aa9.53□□□□□ -0.88
NANOG-201ENST00000229307 PRIM1P49642 420 aaKnown RBP9.53□□□□□ -0.88
NANOG-201ENST00000229307 SOGA3Q5TF21 947 aa9.53□□□□□ -0.88
NANOG-201ENST00000229307 OGFOD1Q8N543 542 aa9.53□□□□□ -0.88
NANOG-201ENST00000229307 CNBD1Q8NA66 436 aa9.53□□□□□ -0.88
NANOG-201ENST00000229307 SLC52A2Q9HAB3 445 aa9.53□□□□□ -0.88
NANOG-201ENST00000229307 LRRFIP2Q9Y608 721 aaKnown RBP9.52□□□□□ -0.88
NANOG-201ENST00000229307 IMMTQ16891 758 aaKnown RBP9.52□□□□□ -0.89
NANOG-201ENST00000229307 FOXD4L1Q9NU39 408 aa9.52□□□□□ -0.89
NANOG-201ENST00000229307 F6X3S4 739 aa9.52□□□□□ -0.89
NANOG-201ENST00000229307 IL13P35225 146 aa9.52□□□□□ -0.89
NANOG-201ENST00000229307 NF2P35240 595 aa9.52□□□□□ -0.89
NANOG-201ENST00000229307 LMOD1P29536 600 aaPredicted RBP9.52□□□□□ -0.89
NANOG-201ENST00000229307 KIF24Q5T7B8 1368 aa9.52□□□□□ -0.89
NANOG-201ENST00000229307 HLA-DOAP06340 250 aa9.52□□□□□ -0.89
NANOG-201ENST00000229307 DNTTIP2Q5QJE6 756 aaKnown RBP9.52□□□□□ -0.89
NANOG-201ENST00000229307 ZNF790Q6PG37 636 aa9.52□□□□□ -0.89
NANOG-201ENST00000229307 KRT27Q7Z3Y8 459 aa9.52□□□□□ -0.89
NANOG-201ENST00000229307 IL1RAPL2Q9NP60 686 aa9.52□□□□□ -0.89
NANOG-201ENST00000229307 SPINK5Q9NQ38 1064 aaPredicted RBP9.52□□□□□ -0.89
NANOG-201ENST00000229307 TMEM131LA2VDJ0 1609 aa9.51□□□□□ -0.89
NANOG-201ENST00000229307 CDKL5O76039 1030 aa9.51□□□□□ -0.89
NANOG-201ENST00000229307 SLC4A3P48751 1232 aa9.51□□□□□ -0.89
NANOG-201ENST00000229307 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.51□□□□□ -0.89
NANOG-201ENST00000229307 INSRP06213 1382 aa9.51□□□□□ -0.89
NANOG-201ENST00000229307 MPHOSPH10O00566 681 aaKnown RBP9.51□□□□□ -0.89
NANOG-201ENST00000229307 PPP4R3BQ5MIZ7 849 aa9.51□□□□□ -0.89
NANOG-201ENST00000229307 WWC2Q6AWC2 1192 aa9.51□□□□□ -0.89
NANOG-201ENST00000229307 SUPT20HQ8NEM7 779 aa9.51□□□□□ -0.89
NANOG-201ENST00000229307 RSPH6AQ9H0K4 717 aa9.51□□□□□ -0.89
NANOG-201ENST00000229307 C22orf23Q9BZE7 217 aa9.51□□□□□ -0.89
NANOG-201ENST00000229307 CYP46A1Q9Y6A2 500 aa9.51□□□□□ -0.89
NANOG-201ENST00000229307 LINS1Q8NG48 757 aa9.51□□□□□ -0.89
NANOG-201ENST00000229307 ZC3H12CQ9C0D7 883 aaKnown RBP9.51□□□□□ -0.89
NANOG-201ENST00000229307 RNF41Q9H4P4 317 aaPredicted RBP9.51□□□□□ -0.89
NANOG-201ENST00000229307 MKNK2Q9HBH9 465 aa9.51□□□□□ -0.89
NANOG-201ENST00000229307 RBM19Q9Y4C8 960 aaKnown RBP9.51□□□□□ -0.89
NANOG-201ENST00000229307 DDX11L8A8MPP1 907 aa9.5□□□□□ -0.89
NANOG-201ENST00000229307 PDCP20941 246 aa9.5□□□□□ -0.89
NANOG-201ENST00000229307 KIAA0232Q92628 1395 aa9.5□□□□□ -0.89
NANOG-201ENST00000229307 MX1P20591 662 aa9.5□□□□□ -0.89
NANOG-201ENST00000229307 CCDC184Q52MB2 194 aa9.5□□□□□ -0.89
NANOG-201ENST00000229307 SETBP1Q9Y6X0 1596 aa9.5□□□□□ -0.89
NANOG-201ENST00000229307 H0YIN7 160 aa9.5□□□□□ -0.89
NANOG-201ENST00000229307 GRM8O00222 908 aa9.5□□□□□ -0.89
NANOG-201ENST00000229307 DDX21Q9NR30 783 aaKnown RBP eCLIP9.5□□□□□ -0.89
NANOG-201ENST00000229307 R3HCC1Q9Y3T6 440 aaKnown RBP9.5□□□□□ -0.89
NANOG-201ENST00000229307 CABP5Q9NP86 173 aa9.5□□□□□ -0.89
NANOG-201ENST00000229307 CLEC11AQ9Y240 323 aa9.5□□□□□ -0.89
NANOG-201ENST00000229307 EXOC6BQ9Y2D4 811 aa9.5□□□□□ -0.89
NANOG-201ENST00000229307 ALKQ9UM73 1620 aa9.49□□□□□ -0.89
NANOG-201ENST00000229307 ANKRD20A12PQ8NF67 263 aa9.49□□□□□ -0.89
NANOG-201ENST00000229307 U3KPZ7 1027 aaPredicted RBP9.49□□□□□ -0.89
NANOG-201ENST00000229307 IRS4O14654 1257 aaPredicted RBP9.49□□□□□ -0.89
NANOG-201ENST00000229307 IL15P40933 162 aaPredicted RBP9.49□□□□□ -0.89
NANOG-201ENST00000229307 ZNF444Q8N0Y2 327 aaPredicted RBP9.49□□□□□ -0.89
NANOG-201ENST00000229307 NAPBQ9H115 298 aa9.49□□□□□ -0.89
NANOG-201ENST00000229307 SPATA31A3Q5VYP0 1347 aa9.49□□□□□ -0.89
NANOG-201ENST00000229307 WDR17Q8IZU2 1322 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms