RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 GCC1Q96CN9 775 aa14.37□□□□□ -0.11
TNFAIP1-201ENST00000226225 GJD4Q96KN9 370 aaPredicted RBP14.37□□□□□ -0.11
TNFAIP1-201ENST00000226225 TRPC5Q9UL62 973 aaPredicted RBP14.37□□□□□ -0.11
TNFAIP1-201ENST00000226225 PHLPP1O60346 1717 aa14.37□□□□□ -0.11
TNFAIP1-201ENST00000226225 PPP1R42Q7Z4L9 355 aa14.37□□□□□ -0.11
TNFAIP1-201ENST00000226225 TEX13AQ9BXU3 409 aaPredicted RBP14.37□□□□□ -0.11
TNFAIP1-201ENST00000226225 BEND3Q5T5X7 828 aa14.36□□□□□ -0.11
TNFAIP1-201ENST00000226225 SIRT2Q8IXJ6 389 aa14.36□□□□□ -0.11
TNFAIP1-201ENST00000226225 ANKRD44Q8N8A2 993 aa14.36□□□□□ -0.11
TNFAIP1-201ENST00000226225 LINS1Q8NG48 757 aa14.36□□□□□ -0.11
TNFAIP1-201ENST00000226225 TBC1D32Q96NH3 1257 aa14.36□□□□□ -0.11
TNFAIP1-201ENST00000226225 C22orf23Q9BZE7 217 aa14.36□□□□□ -0.11
TNFAIP1-201ENST00000226225 HDAC5Q9UQL6 1122 aa14.36□□□□□ -0.11
TNFAIP1-201ENST00000226225 PNMA6EA0A0J9YXQ4 647 aa14.36□□□□□ -0.11
TNFAIP1-201ENST00000226225 SEPT12Q8IYM1 358 aa14.36□□□□□ -0.11
TNFAIP1-201ENST00000226225 NBPF26B4DH59 902 aa14.35□□□□□ -0.11
TNFAIP1-201ENST00000226225 GRM8O00222 908 aa14.35□□□□□ -0.11
TNFAIP1-201ENST00000226225 NBPF14Q5TI25 921 aa14.35□□□□□ -0.11
TNFAIP1-201ENST00000226225 NBPF10Q6P3W6 841 aaKnown RBP14.35□□□□□ -0.11
TNFAIP1-201ENST00000226225 C16orf71Q8IYS4 520 aaPredicted RBP14.35□□□□□ -0.11
TNFAIP1-201ENST00000226225 NBPF15Q8N660 670 aa14.35□□□□□ -0.11
TNFAIP1-201ENST00000226225 PDIA6Q15084 440 aa14.35□□□□□ -0.11
TNFAIP1-201ENST00000226225 TPRNQ4KMQ1 711 aa14.35□□□□□ -0.11
TNFAIP1-201ENST00000226225 HSCBQ8IWL3 235 aa14.34□□□□□ -0.11
TNFAIP1-201ENST00000226225 ZBTB1Q9Y2K1 713 aa14.34□□□□□ -0.11
TNFAIP1-201ENST00000226225 LOC102724428A0A0B4J2F2 783 aa14.34□□□□□ -0.11
TNFAIP1-201ENST00000226225 SIK1P57059 783 aa14.34□□□□□ -0.11
TNFAIP1-201ENST00000226225 BICDL1Q6ZP65 573 aa14.34□□□□□ -0.11
TNFAIP1-201ENST00000226225 GTF2E1P29083 439 aaPredicted RBP14.34□□□□□ -0.11
TNFAIP1-201ENST00000226225 SMC5Q8IY18 1101 aa14.33□□□□□ -0.11
TNFAIP1-201ENST00000226225 FNBP4Q8N3X1 1017 aaPredicted RBP14.33□□□□□ -0.11
TNFAIP1-201ENST00000226225 METTL22Q9BUU2 404 aaPredicted RBP14.33□□□□□ -0.11
TNFAIP1-201ENST00000226225 GRPEL1Q9HAV7 217 aa14.33□□□□□ -0.11
TNFAIP1-201ENST00000226225 BARGINQ6ZT62 677 aa14.33□□□□□ -0.12
TNFAIP1-201ENST00000226225 NCLP19338 710 aaKnown RBP14.33□□□□□ -0.12
TNFAIP1-201ENST00000226225 TAF7LQ5H9L4 462 aa14.33□□□□□ -0.12
TNFAIP1-201ENST00000226225 TSHZ3Q63HK5 1081 aa14.33□□□□□ -0.12
TNFAIP1-201ENST00000226225 PA2G4Q9UQ80 394 aaKnown RBP14.33□□□□□ -0.12
TNFAIP1-201ENST00000226225 ERBB4Q15303 1308 aa14.32□□□□□ -0.12
TNFAIP1-201ENST00000226225 NHSL1Q5SYE7 1610 aa14.32□□□□□ -0.12
TNFAIP1-201ENST00000226225 AHDC1Q5TGY3 1603 aaPredicted RBP14.32□□□□□ -0.12
TNFAIP1-201ENST00000226225 PLBD2Q8NHP8 589 aa14.32□□□□□ -0.12
TNFAIP1-201ENST00000226225 CHMP5Q9NZZ3 219 aa14.32□□□□□ -0.12
TNFAIP1-201ENST00000226225 TRIM6-TRIM34B2RNG4 842 aa14.32□□□□□ -0.12
TNFAIP1-201ENST00000226225 SMIM5Q71RC9 77 aa14.32□□□□□ -0.12
TNFAIP1-201ENST00000226225 PTF1AQ7RTS3 328 aa14.32□□□□□ -0.12
TNFAIP1-201ENST00000226225 ESPNB1AK53 854 aa14.32□□□□□ -0.12
TNFAIP1-201ENST00000226225 ALDH1L1O75891 902 aa14.32□□□□□ -0.12
TNFAIP1-201ENST00000226225 RBM10P98175 930 aaKnown RBP14.32□□□□□ -0.12
TNFAIP1-201ENST00000226225 G3BP1Q13283 466 aaKnown RBP eCLIP14.32□□□□□ -0.12
TNFAIP1-201ENST00000226225 DZIP3Q86Y13 1208 aaKnown RBP14.32□□□□□ -0.12
TNFAIP1-201ENST00000226225 USP54Q70EL1 1684 aa14.31□□□□□ -0.12
TNFAIP1-201ENST00000226225 ATP8B2P98198 1209 aa14.31□□□□□ -0.12
TNFAIP1-201ENST00000226225 NUCB1Q02818 461 aa14.31□□□□□ -0.12
TNFAIP1-201ENST00000226225 LRRCC1Q9C099 1032 aa14.31□□□□□ -0.12
TNFAIP1-201ENST00000226225 ADCY9O60503 1353 aa14.31□□□□□ -0.12
TNFAIP1-201ENST00000226225 NEURL1BA8MQ27 555 aa14.31□□□□□ -0.12
TNFAIP1-201ENST00000226225 PHF14O94880 888 aa14.31□□□□□ -0.12
TNFAIP1-201ENST00000226225 KLHDC4Q8TBB5 520 aa14.31□□□□□ -0.12
TNFAIP1-201ENST00000226225 SMARCC1Q92922 1105 aaPredicted RBP14.31□□□□□ -0.12
TNFAIP1-201ENST00000226225 GCKRQ14397 625 aa14.3□□□□□ -0.12
TNFAIP1-201ENST00000226225 BICC1Q9H694 974 aaKnown RBP14.3□□□□□ -0.12
TNFAIP1-201ENST00000226225 DCTPP1Q9H773 170 aa14.3□□□□□ -0.12
TNFAIP1-201ENST00000226225 CWC25Q9NXE8 425 aaPredicted RBP14.3□□□□□ -0.12
TNFAIP1-201ENST00000226225 IGKV5-2P06315 115 aa14.3□□□□□ -0.12
TNFAIP1-201ENST00000226225 CLCN1P35523 988 aa14.3□□□□□ -0.12
TNFAIP1-201ENST00000226225 NUTM1Q86Y26 1132 aa14.3□□□□□ -0.12
TNFAIP1-201ENST00000226225 OTUD7AQ8TE49 926 aaPredicted RBP14.3□□□□□ -0.12
TNFAIP1-201ENST00000226225 RILPL2Q969X0 211 aa14.3□□□□□ -0.12
TNFAIP1-201ENST00000226225 FAM89AQ96GI7 184 aa14.3□□□□□ -0.12
TNFAIP1-201ENST00000226225 SUCLG2Q96I99 432 aa14.3□□□□□ -0.12
TNFAIP1-201ENST00000226225 MRE11P49959 708 aa14.29□□□□□ -0.12
TNFAIP1-201ENST00000226225 COL18A1P39060 1754 aa14.29□□□□□ -0.12
TNFAIP1-201ENST00000226225 CRKLP46109 303 aaKnown RBP14.29□□□□□ -0.12
TNFAIP1-201ENST00000226225 TRMT112Q9UI30 125 aaKnown RBP14.29□□□□□ -0.12
TNFAIP1-201ENST00000226225 TRIM37O94972 964 aa14.28□□□□□ -0.12
TNFAIP1-201ENST00000226225 CCNL1Q9UK58 526 aaPredicted RBP14.28□□□□□ -0.12
TNFAIP1-201ENST00000226225 LMBR1LQ6UX01 489 aa14.28□□□□□ -0.12
TNFAIP1-201ENST00000226225 GAS2L3Q86XJ1 694 aa14.28□□□□□ -0.12
TNFAIP1-201ENST00000226225 SLC4A9Q96Q91 983 aa14.28□□□□□ -0.12
TNFAIP1-201ENST00000226225 PALLDQ8WX93 1383 aa14.28□□□□□ -0.12
TNFAIP1-201ENST00000226225 RGS12O14924 1447 aa14.28□□□□□ -0.12
TNFAIP1-201ENST00000226225 CCDC87Q9NVE4 849 aa14.28□□□□□ -0.12
TNFAIP1-201ENST00000226225 CYP19A1P11511 503 aaPredicted RBP14.27□□□□□ -0.12
TNFAIP1-201ENST00000226225 FSD2A1L4K1 749 aa14.27□□□□□ -0.13
TNFAIP1-201ENST00000226225 MAP4K4O95819 1239 aaPredicted RBP14.27□□□□□ -0.13
TNFAIP1-201ENST00000226225 IFIT2P09913 472 aaKnown RBP14.27□□□□□ -0.13
TNFAIP1-201ENST00000226225 COL16A1Q07092 1604 aaPredicted RBP14.26□□□□□ -0.13
TNFAIP1-201ENST00000226225 HLFQ16534 295 aa14.26□□□□□ -0.13
TNFAIP1-201ENST00000226225 CLASRPQ8N2M8 674 aaKnown RBP14.26□□□□□ -0.13
TNFAIP1-201ENST00000226225 LMO7Q8WWI1 1683 aa14.26□□□□□ -0.13
TNFAIP1-201ENST00000226225 BCL9LQ86UU0 1499 aa14.26□□□□□ -0.13
TNFAIP1-201ENST00000226225 GNPATO15228 680 aa14.26□□□□□ -0.13
TNFAIP1-201ENST00000226225 KRT27Q7Z3Y8 459 aa14.26□□□□□ -0.13
TNFAIP1-201ENST00000226225 HSP90AB4PQ58FF6 505 aa14.25□□□□□ -0.13
TNFAIP1-201ENST00000226225 NEUROD6Q96NK8 337 aa14.25□□□□□ -0.13
TNFAIP1-201ENST00000226225 TNS2Q63HR2 1409 aa14.25□□□□□ -0.13
TNFAIP1-201ENST00000226225 ITPK1Q13572 414 aa14.25□□□□□ -0.13
TNFAIP1-201ENST00000226225 TNPO1Q92973 898 aaKnown RBP14.25□□□□□ -0.13
TNFAIP1-201ENST00000226225 ABCC6O95255 1503 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms