RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 IL1RAPL2Q9NP60 686 aa21.62■■□□□ 1.05
GCDH-201ENST00000222214 TMOD3Q9NYL9 352 aa21.62■■□□□ 1.05
GCDH-201ENST00000222214 COL16A1Q07092 1604 aaPredicted RBP21.62■■□□□ 1.05
GCDH-201ENST00000222214 TOGARAM1Q9Y4F4 1720 aa21.62■■□□□ 1.05
GCDH-201ENST00000222214 USP42Q9H9J4 1324 aaKnown RBP21.61■■□□□ 1.05
GCDH-201ENST00000222214 CLASRPQ8N2M8 674 aaKnown RBP21.61■■□□□ 1.05
GCDH-201ENST00000222214 ANTXR1Q9H6X2 564 aa21.61■■□□□ 1.05
GCDH-201ENST00000222214 TTC41PQ6P2S7 1318 aa21.61■■□□□ 1.05
GCDH-201ENST00000222214 AFDNP55196 1824 aaKnown RBP21.6■■□□□ 1.05
GCDH-201ENST00000222214 LRP6O75581 1613 aa21.6■■□□□ 1.05
GCDH-201ENST00000222214 NFKBIBQ15653 356 aa21.6■■□□□ 1.05
GCDH-201ENST00000222214 TEX13AQ9BXU3 409 aaPredicted RBP21.6■■□□□ 1.05
GCDH-201ENST00000222214 BICC1Q9H694 974 aaKnown RBP21.6■■□□□ 1.05
GCDH-201ENST00000222214 RABEP1Q15276 862 aa21.59■■□□□ 1.05
GCDH-201ENST00000222214 KAZALD1Q96I82 304 aa21.59■■□□□ 1.05
GCDH-201ENST00000222214 VSIG10Q8N0Z9 540 aa21.59■■□□□ 1.05
GCDH-201ENST00000222214 TRIM6-TRIM34B2RNG4 842 aa21.58■■□□□ 1.05
GCDH-201ENST00000222214 EPB41L2O43491 1005 aaKnown RBP21.58■■□□□ 1.05
GCDH-201ENST00000222214 GPATCH3Q96I76 525 aa21.57■■□□□ 1.04
GCDH-201ENST00000222214 SLKQ9H2G2 1235 aaPredicted RBP21.57■■□□□ 1.04
GCDH-201ENST00000222214 NUTM1Q86Y26 1132 aa21.57■■□□□ 1.04
GCDH-201ENST00000222214 CDCA7Q9BWT1 371 aaPredicted RBP21.57■■□□□ 1.04
GCDH-201ENST00000222214 PHLPP1O60346 1717 aa21.57■■□□□ 1.04
GCDH-201ENST00000222214 WNK3Q9BYP7 1800 aa21.57■■□□□ 1.04
GCDH-201ENST00000222214 NBPF26B4DH59 902 aa21.56■■□□□ 1.04
GCDH-201ENST00000222214 G3BP1Q13283 466 aaKnown RBP eCLIP21.56■■□□□ 1.04
GCDH-201ENST00000222214 NBPF14Q5TI25 921 aa21.56■■□□□ 1.04
GCDH-201ENST00000222214 TSHZ3Q63HK5 1081 aa21.56■■□□□ 1.04
GCDH-201ENST00000222214 NBPF10Q6P3W6 841 aaKnown RBP21.56■■□□□ 1.04
GCDH-201ENST00000222214 NBPF15Q8N660 670 aa21.56■■□□□ 1.04
GCDH-201ENST00000222214 PI4K2BQ8TCG2 481 aa21.56■■□□□ 1.04
GCDH-201ENST00000222214 RILPL2Q969X0 211 aa21.56■■□□□ 1.04
GCDH-201ENST00000222214 NUP188Q5SRE5 1749 aa21.56■■□□□ 1.04
GCDH-201ENST00000222214 GLRX3O76003 335 aaKnown RBP21.56■■□□□ 1.04
GCDH-201ENST00000222214 CHMLP26374 656 aa21.56■■□□□ 1.04
GCDH-201ENST00000222214 ESYT1Q9BSJ8 1104 aa21.56■■□□□ 1.04
GCDH-201ENST00000222214 AK9Q5TCS8 1911 aa21.55■■□□□ 1.04
GCDH-201ENST00000222214 PTCD1O75127 700 aaKnown RBP21.54■■□□□ 1.04
GCDH-201ENST00000222214 PIP4K2AP48426 406 aaPredicted RBP21.54■■□□□ 1.04
GCDH-201ENST00000222214 CNTROBQ8N137 903 aa21.54■■□□□ 1.04
GCDH-201ENST00000222214 ITGB4P16144 1822 aa21.54■■□□□ 1.04
GCDH-201ENST00000222214 RABL6Q3YEC7 729 aaPredicted RBP21.54■■□□□ 1.04
GCDH-201ENST00000222214 CHMP5Q9NZZ3 219 aa21.54■■□□□ 1.04
GCDH-201ENST00000222214 K7ELQ4 463 aaPredicted RBP21.53■■□□□ 1.04
GCDH-201ENST00000222214 EXOC5O00471 708 aa21.53■■□□□ 1.04
GCDH-201ENST00000222214 IFIT2P09913 472 aaKnown RBP21.53■■□□□ 1.04
GCDH-201ENST00000222214 THRAP3Q9Y2W1 955 aaKnown RBP21.53■■□□□ 1.04
GCDH-201ENST00000222214 MCCP23508 829 aa21.52■■□□□ 1.04
GCDH-201ENST00000222214 IL27Q8NEV9 243 aa21.52■■□□□ 1.04
GCDH-201ENST00000222214 ECHDC1Q9NTX5 307 aa21.52■■□□□ 1.04
GCDH-201ENST00000222214 A0A087WZG4 1122 aa21.52■■□□□ 1.04
GCDH-201ENST00000222214 COPRSQ9NQ92 184 aa21.52■■□□□ 1.04
GCDH-201ENST00000222214 PA2G4Q9UQ80 394 aaKnown RBP21.52■■□□□ 1.04
GCDH-201ENST00000222214 A1BGP04217 495 aa21.51■■□□□ 1.03
GCDH-201ENST00000222214 PIGBQ92521 554 aa21.51■■□□□ 1.03
GCDH-201ENST00000222214 UBE3BQ7Z3V4 1068 aa21.5■■□□□ 1.03
GCDH-201ENST00000222214 CCDC191Q8NCU4 936 aa21.5■■□□□ 1.03
GCDH-201ENST00000222214 CWC25Q9NXE8 425 aaPredicted RBP21.5■■□□□ 1.03
GCDH-201ENST00000222214 BCL9O00512 1426 aa21.5■■□□□ 1.03
GCDH-201ENST00000222214 STARD3NLO95772 234 aa21.5■■□□□ 1.03
GCDH-201ENST00000222214 CIZ1Q9ULV3 898 aaPredicted RBP21.5■■□□□ 1.03
GCDH-201ENST00000222214 NRAPQ86VF7 1730 aa21.5■■□□□ 1.03
GCDH-201ENST00000222214 H7C1W4 665 aa21.49■■□□□ 1.03
GCDH-201ENST00000222214 CASP7P55210 303 aa21.49■■□□□ 1.03
GCDH-201ENST00000222214 ANAPC15P60006 121 aa21.49■■□□□ 1.03
GCDH-201ENST00000222214 ATP5J2-PTCD1G3V325 749 aa21.48■■□□□ 1.03
GCDH-201ENST00000222214 ST18O60284 1047 aa21.48■■□□□ 1.03
GCDH-201ENST00000222214 TOM1O60784 492 aa21.48■■□□□ 1.03
GCDH-201ENST00000222214 SASH1O94885 1247 aa21.48■■□□□ 1.03
GCDH-201ENST00000222214 AACSQ86V21 672 aa21.48■■□□□ 1.03
GCDH-201ENST00000222214 UNC5CLQ8IV45 518 aa21.48■■□□□ 1.03
GCDH-201ENST00000222214 ATG3Q9NT62 314 aa21.48■■□□□ 1.03
GCDH-201ENST00000222214 EPHA10Q5JZY3 1008 aa21.48■■□□□ 1.03
GCDH-201ENST00000222214 TTLL7Q6ZT98 887 aa21.48■■□□□ 1.03
GCDH-201ENST00000222214 NWD2Q9ULI1 1742 aa21.47■■□□□ 1.03
GCDH-201ENST00000222214 ASAP1Q9ULH1 1129 aa21.47■■□□□ 1.03
GCDH-201ENST00000222214 RBM42Q9BTD8 480 aaKnown RBP21.47■■□□□ 1.03
GCDH-201ENST00000222214 HSP90AA1P07900 732 aaKnown RBP21.46■■□□□ 1.03
GCDH-201ENST00000222214 DDIT3P35638 169 aa21.46■■□□□ 1.03
GCDH-201ENST00000222214 RFX5P48382 616 aaPredicted RBP21.46■■□□□ 1.03
GCDH-201ENST00000222214 IL17RAQ96F46 866 aa21.46■■□□□ 1.03
GCDH-201ENST00000222214 ANO2Q9NQ90 1003 aa21.46■■□□□ 1.03
GCDH-201ENST00000222214 SPATA31A1Q5TZJ5 1347 aa21.46■■□□□ 1.03
GCDH-201ENST00000222214 TJP1Q07157 1748 aa21.45■■□□□ 1.02
GCDH-201ENST00000222214 FRAT2O75474 233 aaPredicted RBP21.45■■□□□ 1.02
GCDH-201ENST00000222214 SPRYD3Q8NCJ5 442 aa21.45■■□□□ 1.02
GCDH-201ENST00000222214 PTPN12Q05209 780 aaKnown RBP21.45■■□□□ 1.02
GCDH-201ENST00000222214 KIF6Q6ZMV9 814 aa21.45■■□□□ 1.02
GCDH-201ENST00000222214 RUFY2Q8WXA3 655 aa21.45■■□□□ 1.02
GCDH-201ENST00000222214 EVI5LQ96CN4 794 aa21.45■■□□□ 1.02
GCDH-201ENST00000222214 CD2BP2O95400 341 aaKnown RBP21.44■■□□□ 1.02
GCDH-201ENST00000222214 TRIM28Q13263 835 aaKnown RBP21.44■■□□□ 1.02
GCDH-201ENST00000222214 DNAJC10Q8IXB1 793 aa21.44■■□□□ 1.02
GCDH-201ENST00000222214 EAF2Q96CJ1 260 aaPredicted RBP21.44■■□□□ 1.02
GCDH-201ENST00000222214 SIL1Q9H173 461 aa21.43■■□□□ 1.02
GCDH-201ENST00000222214 ZBTB3Q9H5J0 574 aa21.43■■□□□ 1.02
GCDH-201ENST00000222214 HIP1O00291 1037 aa21.43■■□□□ 1.02
GCDH-201ENST00000222214 SGSM2O43147 1006 aa21.43■■□□□ 1.02
GCDH-201ENST00000222214 TCIRG1Q13488 830 aa21.43■■□□□ 1.02
GCDH-201ENST00000222214 ISCA1Q9BUE6 129 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms