RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 GNL2Q13823 731 aaKnown RBP12.57□□□□□ -0.4
VPS18-201ENST00000220509 BMP2KLQ5H9B9 411 aa12.57□□□□□ -0.4
VPS18-201ENST00000220509 USP6P35125 1406 aa12.56□□□□□ -0.4
VPS18-201ENST00000220509 SMC5Q8IY18 1101 aa12.56□□□□□ -0.4
VPS18-201ENST00000220509 SPATA31D1Q6ZQQ2 1576 aa12.56□□□□□ -0.4
VPS18-201ENST00000220509 PTPRCP08575 1304 aa12.56□□□□□ -0.4
VPS18-201ENST00000220509 SMC3Q9UQE7 1217 aa12.56□□□□□ -0.4
VPS18-201ENST00000220509 PI4KAP2A4QPH2 592 aa12.56□□□□□ -0.4
VPS18-201ENST00000220509 PTCD1O75127 700 aaKnown RBP12.56□□□□□ -0.4
VPS18-201ENST00000220509 MX1P20591 662 aa12.56□□□□□ -0.4
VPS18-201ENST00000220509 SLC39A6Q13433 755 aa12.56□□□□□ -0.4
VPS18-201ENST00000220509 CWC27Q6UX04 472 aaKnown RBP12.56□□□□□ -0.4
VPS18-201ENST00000220509 PI4KAP1Q8N8J0 262 aa12.56□□□□□ -0.4
VPS18-201ENST00000220509 TIGD1Q96MW7 591 aa12.56□□□□□ -0.4
VPS18-201ENST00000220509 LGR6Q9HBX8 967 aa12.56□□□□□ -0.4
VPS18-201ENST00000220509 KIF13AQ9H1H9 1805 aa12.56□□□□□ -0.4
VPS18-201ENST00000220509 DTNBO60941 627 aa12.55□□□□□ -0.4
VPS18-201ENST00000220509 PIP4K2AP48426 406 aaPredicted RBP12.55□□□□□ -0.4
VPS18-201ENST00000220509 SPG7Q9UQ90 795 aa12.55□□□□□ -0.4
VPS18-201ENST00000220509 SASS6Q6UVJ0 657 aa12.55□□□□□ -0.4
VPS18-201ENST00000220509 TTC12Q9H892 705 aaPredicted RBP12.55□□□□□ -0.4
VPS18-201ENST00000220509 AACSQ86V21 672 aa12.55□□□□□ -0.4
VPS18-201ENST00000220509 USP25Q9UHP3 1055 aa12.55□□□□□ -0.4
VPS18-201ENST00000220509 ZKSCAN5Q9Y2L8 839 aa12.55□□□□□ -0.4
VPS18-201ENST00000220509 ATP7BP35670 1465 aa12.54□□□□□ -0.4
VPS18-201ENST00000220509 SSR1P43307 286 aaKnown RBP12.54□□□□□ -0.4
VPS18-201ENST00000220509 FOSBP53539 338 aa12.54□□□□□ -0.4
VPS18-201ENST00000220509 TMEM94Q12767 1356 aa12.54□□□□□ -0.4
VPS18-201ENST00000220509 ZBTB7BO15156 539 aaPredicted RBP12.54□□□□□ -0.4
VPS18-201ENST00000220509 ADAMTS2O95450 1211 aa12.54□□□□□ -0.4
VPS18-201ENST00000220509 G2E3Q7L622 706 aa12.54□□□□□ -0.4
VPS18-201ENST00000220509 FAM184AQ8NB25 1140 aa12.54□□□□□ -0.4
VPS18-201ENST00000220509 DNAAF4Q8WXU2 420 aa12.54□□□□□ -0.4
VPS18-201ENST00000220509 H3BQV1 296 aa12.54□□□□□ -0.4
VPS18-201ENST00000220509 IFFO2Q5TF58 517 aa12.54□□□□□ -0.4
VPS18-201ENST00000220509 NPHP4O75161 1426 aaPredicted RBP12.54□□□□□ -0.4
VPS18-201ENST00000220509 MAP2K1Q02750 393 aaPredicted RBP12.53□□□□□ -0.4
VPS18-201ENST00000220509 RNF20Q5VTR2 975 aa12.53□□□□□ -0.4
VPS18-201ENST00000220509 NBPF20Q3BBV1 942 aa12.53□□□□□ -0.4
VPS18-201ENST00000220509 RNF217Q8TC41 542 aa12.53□□□□□ -0.4
VPS18-201ENST00000220509 IP6K1Q92551 441 aa12.53□□□□□ -0.4
VPS18-201ENST00000220509 CCDC85AQ96PX6 553 aaPredicted RBP12.53□□□□□ -0.4
VPS18-201ENST00000220509 TMX1Q9H3N1 280 aa12.53□□□□□ -0.4
VPS18-201ENST00000220509 CPS1P31327 1500 aa12.53□□□□□ -0.4
VPS18-201ENST00000220509 ARHGEF28Q8N1W1 1705 aaKnown RBP12.53□□□□□ -0.4
VPS18-201ENST00000220509 MYCBPQ99417 103 aaPredicted RBP12.53□□□□□ -0.4
VPS18-201ENST00000220509 MSH6P52701 1360 aa12.52□□□□□ -0.4
VPS18-201ENST00000220509 ARMCX6Q7L4S7 300 aa12.52□□□□□ -0.4
VPS18-201ENST00000220509 ANKRD44Q8N8A2 993 aa12.52□□□□□ -0.4
VPS18-201ENST00000220509 TSPY26PQ9H489 355 aa12.52□□□□□ -0.4
VPS18-201ENST00000220509 AMOTQ4VCS5 1084 aa12.52□□□□□ -0.41
VPS18-201ENST00000220509 YY1AP1Q9H869 796 aa12.52□□□□□ -0.41
VPS18-201ENST00000220509 DYNC1I1O14576 645 aa12.52□□□□□ -0.41
VPS18-201ENST00000220509 PPP1R42Q7Z4L9 355 aa12.52□□□□□ -0.41
VPS18-201ENST00000220509 LARP6Q9BRS8 491 aaKnown RBP12.52□□□□□ -0.41
VPS18-201ENST00000220509 CHPF2Q9P2E5 772 aa12.52□□□□□ -0.41
VPS18-201ENST00000220509 ATP6V1DQ9Y5K8 247 aa12.52□□□□□ -0.41
VPS18-201ENST00000220509 SBNO1A3KN83 1393 aa12.52□□□□□ -0.41
VPS18-201ENST00000220509 SNX21Q969T3 373 aa12.51□□□□□ -0.41
VPS18-201ENST00000220509 KIF1BPQ96EK5 621 aa12.51□□□□□ -0.41
VPS18-201ENST00000220509 DBF4Q9UBU7 674 aaPredicted RBP12.51□□□□□ -0.41
VPS18-201ENST00000220509 NOL7Q9UMY1 257 aaKnown RBP12.51□□□□□ -0.41
VPS18-201ENST00000220509 SDSP20132 328 aa12.51□□□□□ -0.41
VPS18-201ENST00000220509 TDO2P48775 406 aa12.51□□□□□ -0.41
VPS18-201ENST00000220509 ZNF335Q9H4Z2 1342 aaPredicted RBP12.51□□□□□ -0.41
VPS18-201ENST00000220509 WASHC4Q2M389 1173 aa12.51□□□□□ -0.41
VPS18-201ENST00000220509 TTC22Q5TAA0 569 aa12.51□□□□□ -0.41
VPS18-201ENST00000220509 CALR3Q96L12 384 aaKnown RBP12.51□□□□□ -0.41
VPS18-201ENST00000220509 CEP83Q9Y592 693 aa12.51□□□□□ -0.41
VPS18-201ENST00000220509 SATB1Q01826 763 aa12.5□□□□□ -0.41
VPS18-201ENST00000220509 ERC1Q8IUD2 1116 aa12.5□□□□□ -0.41
VPS18-201ENST00000220509 CEP120Q8N960 986 aa12.5□□□□□ -0.41
VPS18-201ENST00000220509 PPP1R9BQ96SB3 815 aa12.5□□□□□ -0.41
VPS18-201ENST00000220509 NPHP3Q7Z494 1330 aa12.5□□□□□ -0.41
VPS18-201ENST00000220509 CPSF1Q10570 1443 aaKnown RBP12.5□□□□□ -0.41
VPS18-201ENST00000220509 CD163L1Q9NR16 1453 aa12.5□□□□□ -0.41
VPS18-201ENST00000220509 MPHOSPH10O00566 681 aaKnown RBP12.5□□□□□ -0.41
VPS18-201ENST00000220509 KCNQ3O43525 872 aa12.5□□□□□ -0.41
VPS18-201ENST00000220509 IL17REQ8NFR9 667 aa12.5□□□□□ -0.41
VPS18-201ENST00000220509 OTUD7AQ8TE49 926 aaPredicted RBP12.5□□□□□ -0.41
VPS18-201ENST00000220509 MYD88Q99836 296 aa12.5□□□□□ -0.41
VPS18-201ENST00000220509 CCDC8Q9H0W5 538 aaPredicted RBP12.5□□□□□ -0.41
VPS18-201ENST00000220509 MAP3K2Q9Y2U5 619 aa12.5□□□□□ -0.41
VPS18-201ENST00000220509 KIF3AQ9Y496 699 aa12.5□□□□□ -0.41
VPS18-201ENST00000220509 CEP85Q6P2H3 762 aa12.49□□□□□ -0.41
VPS18-201ENST00000220509 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.49□□□□□ -0.41
VPS18-201ENST00000220509 MYOM1P52179 1685 aa12.49□□□□□ -0.41
VPS18-201ENST00000220509 HTATSF1O43719 755 aaKnown RBP12.49□□□□□ -0.41
VPS18-201ENST00000220509 TSPYL1Q9H0U9 437 aa12.49□□□□□ -0.41
VPS18-201ENST00000220509 PHAXQ9H814 394 aaKnown RBP12.49□□□□□ -0.41
VPS18-201ENST00000220509 TMEM63CQ9P1W3 806 aa12.49□□□□□ -0.41
VPS18-201ENST00000220509 CHL1O00533 1208 aa12.49□□□□□ -0.41
VPS18-201ENST00000220509 FIBPO43427 364 aa12.49□□□□□ -0.41
VPS18-201ENST00000220509 SF3A1Q15459 793 aaKnown RBP12.49□□□□□ -0.41
VPS18-201ENST00000220509 PDCL2Q8N4E4 241 aa12.49□□□□□ -0.41
VPS18-201ENST00000220509 BOLA2Q9H3K6 86 aa12.49□□□□□ -0.41
VPS18-201ENST00000220509 SLC20A2Q08357 652 aa12.48□□□□□ -0.41
VPS18-201ENST00000220509 NFATC2IPQ8NCF5 419 aa12.48□□□□□ -0.41
VPS18-201ENST00000220509 AXIN2Q9Y2T1 843 aa12.48□□□□□ -0.41
VPS18-201ENST00000220509 DCTPP1Q9H773 170 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms