RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 MX1P20591 662 aa11.29□□□□□ -0.6
CCDC113-201ENST00000219299 RAI14Q9P0K7 980 aa11.29□□□□□ -0.6
CCDC113-201ENST00000219299 GOLGA6L1Q8N7Z2 621 aa11.28□□□□□ -0.6
CCDC113-201ENST00000219299 FAM89AQ96GI7 184 aa11.28□□□□□ -0.6
CCDC113-201ENST00000219299 AFF2P51816 1311 aa11.28□□□□□ -0.6
CCDC113-201ENST00000219299 CAVIN4Q5BKX8 364 aa11.28□□□□□ -0.6
CCDC113-201ENST00000219299 SEPT12Q8IYM1 358 aa11.28□□□□□ -0.6
CCDC113-201ENST00000219299 DDX49Q9Y6V7 483 aaKnown RBP11.28□□□□□ -0.6
CCDC113-201ENST00000219299 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.28□□□□□ -0.6
CCDC113-201ENST00000219299 CCDC34Q96HJ3 373 aa11.28□□□□□ -0.6
CCDC113-201ENST00000219299 UTP14AQ9BVJ6 771 aaKnown RBP11.28□□□□□ -0.6
CCDC113-201ENST00000219299 RBM5P52756 815 aaKnown RBP eCLIP11.28□□□□□ -0.6
CCDC113-201ENST00000219299 CCDC87Q9NVE4 849 aa11.28□□□□□ -0.6
CCDC113-201ENST00000219299 HIP1O00291 1037 aa11.27□□□□□ -0.6
CCDC113-201ENST00000219299 GLRX3O76003 335 aaKnown RBP11.27□□□□□ -0.6
CCDC113-201ENST00000219299 TRIM37O94972 964 aa11.27□□□□□ -0.6
CCDC113-201ENST00000219299 IGHDP01880 384 aa11.27□□□□□ -0.6
CCDC113-201ENST00000219299 KCNQ4P56696 695 aa11.27□□□□□ -0.6
CCDC113-201ENST00000219299 USP19O94966 1318 aa11.27□□□□□ -0.61
CCDC113-201ENST00000219299 SOS1Q07889 1333 aaPredicted RBP11.27□□□□□ -0.61
CCDC113-201ENST00000219299 ST5P78524 1137 aa11.27□□□□□ -0.61
CCDC113-201ENST00000219299 CCDC152Q4G0S7 254 aa11.27□□□□□ -0.61
CCDC113-201ENST00000219299 CWC27Q6UX04 472 aaKnown RBP11.27□□□□□ -0.61
CCDC113-201ENST00000219299 MROH1Q8NDA8 1641 aa11.27□□□□□ -0.61
CCDC113-201ENST00000219299 DEPDC5O75140 1603 aa11.27□□□□□ -0.61
CCDC113-201ENST00000219299 CPLX2Q6PUV4 134 aaKnown RBP11.27□□□□□ -0.61
CCDC113-201ENST00000219299 CYP27B1O15528 508 aa11.27□□□□□ -0.61
CCDC113-201ENST00000219299 NFXL1Q6ZNB6 911 aa11.27□□□□□ -0.61
CCDC113-201ENST00000219299 STK11IPQ8N1F8 1099 aa11.27□□□□□ -0.61
CCDC113-201ENST00000219299 CPSF1Q10570 1443 aaKnown RBP11.27□□□□□ -0.61
CCDC113-201ENST00000219299 TMEM131LA2VDJ0 1609 aa11.27□□□□□ -0.61
CCDC113-201ENST00000219299 IRS4O14654 1257 aaPredicted RBP11.26□□□□□ -0.61
CCDC113-201ENST00000219299 LOC102724428A0A0B4J2F2 783 aa11.26□□□□□ -0.61
CCDC113-201ENST00000219299 CPLX1O14810 134 aa11.26□□□□□ -0.61
CCDC113-201ENST00000219299 SIK1P57059 783 aa11.26□□□□□ -0.61
CCDC113-201ENST00000219299 AKAP17AQ02040 695 aaKnown RBP11.26□□□□□ -0.61
CCDC113-201ENST00000219299 SAMD1Q6SPF0 538 aaPredicted RBP11.26□□□□□ -0.61
CCDC113-201ENST00000219299 SNRKQ9NRH2 765 aa11.26□□□□□ -0.61
CCDC113-201ENST00000219299 PA2G4Q9UQ80 394 aaKnown RBP11.26□□□□□ -0.61
CCDC113-201ENST00000219299 MTMR7Q9Y216 660 aa11.26□□□□□ -0.61
CCDC113-201ENST00000219299 RRP12Q5JTH9 1297 aaKnown RBP11.26□□□□□ -0.61
CCDC113-201ENST00000219299 KRT27Q7Z3Y8 459 aa11.26□□□□□ -0.61
CCDC113-201ENST00000219299 FAM43AQ8N2R8 423 aa11.26□□□□□ -0.61
CCDC113-201ENST00000219299 FAM184AQ8NB25 1140 aa11.26□□□□□ -0.61
CCDC113-201ENST00000219299 PLBD2Q8NHP8 589 aa11.26□□□□□ -0.61
CCDC113-201ENST00000219299 KIF3AQ9Y496 699 aa11.26□□□□□ -0.61
CCDC113-201ENST00000219299 DHX16O60231 1041 aaKnown RBP11.26□□□□□ -0.61
CCDC113-201ENST00000219299 TSHZ3Q63HK5 1081 aa11.26□□□□□ -0.61
CCDC113-201ENST00000219299 STK32BQ9NY57 414 aa11.26□□□□□ -0.61
CCDC113-201ENST00000219299 LAMC1P11047 1609 aa11.26□□□□□ -0.61
CCDC113-201ENST00000219299 QRICH2Q9H0J4 1663 aa11.25□□□□□ -0.61
CCDC113-201ENST00000219299 FOXD4L6Q3SYB3 417 aaPredicted RBP11.25□□□□□ -0.61
CCDC113-201ENST00000219299 FOXD4L3Q6VB84 417 aaPredicted RBP11.25□□□□□ -0.61
CCDC113-201ENST00000219299 CCDC24Q8N4L8 307 aa11.25□□□□□ -0.61
CCDC113-201ENST00000219299 TECPR2O15040 1411 aa11.25□□□□□ -0.61
CCDC113-201ENST00000219299 DLC1Q96QB1 1528 aa11.25□□□□□ -0.61
CCDC113-201ENST00000219299 ANKRD44Q8N8A2 993 aa11.25□□□□□ -0.61
CCDC113-201ENST00000219299 JCADQ9P266 1359 aa11.25□□□□□ -0.61
CCDC113-201ENST00000219299 BLMP54132 1417 aaPredicted RBP11.25□□□□□ -0.61
CCDC113-201ENST00000219299 ERICH2A1L162 156 aa11.25□□□□□ -0.61
CCDC113-201ENST00000219299 SLC5A1P13866 664 aa11.25□□□□□ -0.61
CCDC113-201ENST00000219299 BAG6P46379 1132 aa11.25□□□□□ -0.61
CCDC113-201ENST00000219299 ANKRD18AQ8IVF6 992 aa11.25□□□□□ -0.61
CCDC113-201ENST00000219299 USP31Q70CQ4 1352 aa11.25□□□□□ -0.61
CCDC113-201ENST00000219299 CDK12Q9NYV4 1490 aaPredicted RBP11.25□□□□□ -0.61
CCDC113-201ENST00000219299 HCLS1P14317 486 aaPredicted RBP11.25□□□□□ -0.61
CCDC113-201ENST00000219299 NCBP3Q53F19 620 aaKnown RBP11.25□□□□□ -0.61
CCDC113-201ENST00000219299 RHPN1Q8TCX5 695 aa11.25□□□□□ -0.61
CCDC113-201ENST00000219299 MAP7D2Q96T17 732 aa11.25□□□□□ -0.61
CCDC113-201ENST00000219299 NRXN1Q9ULB1 1477 aa11.24□□□□□ -0.61
CCDC113-201ENST00000219299 NFKBIBQ15653 356 aa11.24□□□□□ -0.61
CCDC113-201ENST00000219299 FAM196AQ6ZSG2 479 aa11.24□□□□□ -0.61
CCDC113-201ENST00000219299 METTL22Q9BUU2 404 aaPredicted RBP11.24□□□□□ -0.61
CCDC113-201ENST00000219299 FAM13BQ9NYF5 915 aa11.24□□□□□ -0.61
CCDC113-201ENST00000219299 CHMP5Q9NZZ3 219 aa11.24□□□□□ -0.61
CCDC113-201ENST00000219299 CDC42BPGQ6DT37 1551 aa11.24□□□□□ -0.61
CCDC113-201ENST00000219299 ATP8B2P98198 1209 aa11.24□□□□□ -0.61
CCDC113-201ENST00000219299 ADGRB1O14514 1584 aa11.24□□□□□ -0.61
CCDC113-201ENST00000219299 ZNF771Q7L3S4 317 aaPredicted RBP11.24□□□□□ -0.61
CCDC113-201ENST00000219299 HELBQ8NG08 1087 aaPredicted RBP11.24□□□□□ -0.61
CCDC113-201ENST00000219299 REREQ9P2R6 1566 aa11.24□□□□□ -0.61
CCDC113-201ENST00000219299 NEK4P51957 841 aa11.23□□□□□ -0.61
CCDC113-201ENST00000219299 ZSCAN25Q6NSZ9 544 aa11.23□□□□□ -0.61
CCDC113-201ENST00000219299 ECHDC1Q9NTX5 307 aa11.23□□□□□ -0.61
CCDC113-201ENST00000219299 PARP3Q9Y6F1 533 aa11.23□□□□□ -0.61
CCDC113-201ENST00000219299 SH3TC1Q8TE82 1336 aa11.23□□□□□ -0.61
CCDC113-201ENST00000219299 MTERF4Q7Z6M4 381 aaKnown RBP11.23□□□□□ -0.61
CCDC113-201ENST00000219299 PIGBQ92521 554 aa11.23□□□□□ -0.61
CCDC113-201ENST00000219299 PKNOX2Q96KN3 472 aa11.23□□□□□ -0.61
CCDC113-201ENST00000219299 NYXQ9GZU5 481 aa11.23□□□□□ -0.61
CCDC113-201ENST00000219299 PRAMEF22A3QJZ6 481 aa11.23□□□□□ -0.61
CCDC113-201ENST00000219299 H3BQV1 296 aa11.23□□□□□ -0.61
CCDC113-201ENST00000219299 IFFO2Q5TF58 517 aa11.23□□□□□ -0.61
CCDC113-201ENST00000219299 TTLL7Q6ZT98 887 aa11.23□□□□□ -0.61
CCDC113-201ENST00000219299 ANO8Q9HCE9 1232 aaPredicted RBP11.23□□□□□ -0.61
CCDC113-201ENST00000219299 IQSEC3Q9UPP2 1182 aaPredicted RBP11.23□□□□□ -0.61
CCDC113-201ENST00000219299 NACAP1Q9BZK3 213 aa11.23□□□□□ -0.61
CCDC113-201ENST00000219299 ZBTB40Q9NUA8 1239 aa11.23□□□□□ -0.61
CCDC113-201ENST00000219299 THRAP3Q9Y2W1 955 aaKnown RBP11.22□□□□□ -0.61
CCDC113-201ENST00000219299 SOS2Q07890 1332 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms