RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 UFL1O94874 794 aa16.23■□□□□ 0.19
SIX4-201ENST00000216513 CCDC82Q8N4S0 544 aa16.23■□□□□ 0.19
SIX4-201ENST00000216513 BRPF3Q9ULD4 1205 aa16.23■□□□□ 0.19
SIX4-201ENST00000216513 GOLGA6L1Q8N7Z2 621 aa16.22■□□□□ 0.19
SIX4-201ENST00000216513 MAP3K1Q13233 1512 aa16.22■□□□□ 0.19
SIX4-201ENST00000216513 RNMTO43148 476 aaKnown RBP16.22■□□□□ 0.19
SIX4-201ENST00000216513 OFD1O75665 1012 aa16.22■□□□□ 0.19
SIX4-201ENST00000216513 IPO7O95373 1038 aaKnown RBP16.22■□□□□ 0.19
SIX4-201ENST00000216513 TNNT3P45378 269 aaPredicted RBP16.22■□□□□ 0.19
SIX4-201ENST00000216513 PIK3R4Q99570 1358 aa16.22■□□□□ 0.19
SIX4-201ENST00000216513 FANCIQ9NVI1 1328 aa16.22■□□□□ 0.19
SIX4-201ENST00000216513 NAP1L1P55209 391 aaKnown RBP16.22■□□□□ 0.19
SIX4-201ENST00000216513 CAVIN1Q6NZI2 390 aaKnown RBP16.21■□□□□ 0.19
SIX4-201ENST00000216513 SSH1Q8WYL5 1049 aa16.21■□□□□ 0.19
SIX4-201ENST00000216513 PPP4R3AQ6IN85 833 aa16.21■□□□□ 0.19
SIX4-201ENST00000216513 PDILTQ8N807 584 aa16.21■□□□□ 0.19
SIX4-201ENST00000216513 IQCA1Q86XH1 822 aa16.21■□□□□ 0.19
SIX4-201ENST00000216513 RPAP2Q8IXW5 612 aaPredicted RBP16.21■□□□□ 0.19
SIX4-201ENST00000216513 SEPT12Q8IYM1 358 aa16.21■□□□□ 0.19
SIX4-201ENST00000216513 PPFIA3O75145 1194 aa16.21■□□□□ 0.19
SIX4-201ENST00000216513 LIG1P18858 919 aa16.21■□□□□ 0.19
SIX4-201ENST00000216513 DPP8Q6V1X1 898 aaPredicted RBP16.21■□□□□ 0.19
SIX4-201ENST00000216513 MPHOSPH6Q99547 160 aaKnown RBP16.21■□□□□ 0.18
SIX4-201ENST00000216513 TNNI2P48788 182 aa16.2■□□□□ 0.18
SIX4-201ENST00000216513 POLKQ9UBT6 870 aa16.2■□□□□ 0.18
SIX4-201ENST00000216513 TSPY2A6NKD2 308 aa16.2■□□□□ 0.18
SIX4-201ENST00000216513 BRPF1P55201 1214 aaPredicted RBP16.2■□□□□ 0.18
SIX4-201ENST00000216513 NIM1KQ8IY84 436 aa16.2■□□□□ 0.18
SIX4-201ENST00000216513 SPC24Q8NBT2 197 aa16.2■□□□□ 0.18
SIX4-201ENST00000216513 C20orf194Q5TEA3 1177 aa16.2■□□□□ 0.18
SIX4-201ENST00000216513 ZGPATQ8N5A5 531 aaKnown RBP16.2■□□□□ 0.18
SIX4-201ENST00000216513 CRNKL1Q9BZJ0 848 aaKnown RBP16.2■□□□□ 0.18
SIX4-201ENST00000216513 NOL7Q9UMY1 257 aaKnown RBP16.2■□□□□ 0.18
SIX4-201ENST00000216513 RAB11FIP3O75154 756 aa16.2■□□□□ 0.18
SIX4-201ENST00000216513 DHX37Q8IY37 1157 aaKnown RBP16.2■□□□□ 0.18
SIX4-201ENST00000216513 PRPF40AO75400 957 aaKnown RBP16.2■□□□□ 0.18
SIX4-201ENST00000216513 HOMER1Q86YM7 354 aa16.2■□□□□ 0.18
SIX4-201ENST00000216513 WDR97A6NE52 1622 aa16.2■□□□□ 0.18
SIX4-201ENST00000216513 PDE3AQ14432 1141 aa16.19■□□□□ 0.18
SIX4-201ENST00000216513 LMBR1LQ6UX01 489 aa16.19■□□□□ 0.18
SIX4-201ENST00000216513 PDCL3Q9H2J4 239 aa16.19■□□□□ 0.18
SIX4-201ENST00000216513 AFF2P51816 1311 aa16.19■□□□□ 0.18
SIX4-201ENST00000216513 HCLS1P14317 486 aaPredicted RBP16.19■□□□□ 0.18
SIX4-201ENST00000216513 CYP7A1P22680 504 aa16.19■□□□□ 0.18
SIX4-201ENST00000216513 TTF1Q15361 905 aaPredicted RBP16.19■□□□□ 0.18
SIX4-201ENST00000216513 BLOC1S2Q6QNY1 142 aa16.19■□□□□ 0.18
SIX4-201ENST00000216513 CTCFLQ8NI51 663 aaPredicted RBP16.19■□□□□ 0.18
SIX4-201ENST00000216513 JAKMIP1Q96N16 626 aaKnown RBP16.19■□□□□ 0.18
SIX4-201ENST00000216513 SDF4Q9BRK5 362 aa16.19■□□□□ 0.18
SIX4-201ENST00000216513 ABCC11Q96J66 1382 aa16.18■□□□□ 0.18
SIX4-201ENST00000216513 UGGT1Q9NYU2 1555 aa16.18■□□□□ 0.18
SIX4-201ENST00000216513 FIBPO43427 364 aa16.18■□□□□ 0.18
SIX4-201ENST00000216513 STK38Q15208 465 aa16.18■□□□□ 0.18
SIX4-201ENST00000216513 FLAD1Q8NFF5 587 aa16.18■□□□□ 0.18
SIX4-201ENST00000216513 PDE4BQ07343 736 aa16.18■□□□□ 0.18
SIX4-201ENST00000216513 ATP2B3Q16720 1220 aa16.18■□□□□ 0.18
SIX4-201ENST00000216513 CDKL5O76039 1030 aa16.17■□□□□ 0.18
SIX4-201ENST00000216513 OLFM4Q6UX06 510 aa16.17■□□□□ 0.18
SIX4-201ENST00000216513 ZNF213O14771 459 aa16.17■□□□□ 0.18
SIX4-201ENST00000216513 CHD1LQ86WJ1 897 aa16.17■□□□□ 0.18
SIX4-201ENST00000216513 IL27Q8NEV9 243 aa16.17■□□□□ 0.18
SIX4-201ENST00000216513 EHMT1Q9H9B1 1298 aa16.17■□□□□ 0.18
SIX4-201ENST00000216513 MAP3K5Q99683 1374 aa16.17■□□□□ 0.18
SIX4-201ENST00000216513 GLRX3O76003 335 aaKnown RBP16.17■□□□□ 0.18
SIX4-201ENST00000216513 UQCRFS1P1P0C7P4 283 aa16.16■□□□□ 0.18
SIX4-201ENST00000216513 ANKRD2Q9GZV1 360 aa16.16■□□□□ 0.18
SIX4-201ENST00000216513 PPIP5K2O43314 1243 aa16.16■□□□□ 0.18
SIX4-201ENST00000216513 TCIRG1Q13488 830 aa16.16■□□□□ 0.18
SIX4-201ENST00000216513 SASS6Q6UVJ0 657 aa16.16■□□□□ 0.18
SIX4-201ENST00000216513 C2CD5Q86YS7 1000 aa16.16■□□□□ 0.18
SIX4-201ENST00000216513 U3KPZ7 1027 aaPredicted RBP16.16■□□□□ 0.18
SIX4-201ENST00000216513 SYCP1Q15431 976 aa16.16■□□□□ 0.18
SIX4-201ENST00000216513 NAA16Q6N069 864 aaPredicted RBP16.16■□□□□ 0.18
SIX4-201ENST00000216513 STX8Q9UNK0 236 aa16.16■□□□□ 0.18
SIX4-201ENST00000216513 MX1P20591 662 aa16.16■□□□□ 0.18
SIX4-201ENST00000216513 HSP90AA2PQ14568 343 aaPredicted RBP16.16■□□□□ 0.18
SIX4-201ENST00000216513 UNC5CLQ8IV45 518 aa16.15■□□□□ 0.18
SIX4-201ENST00000216513 DNAJC10Q8IXB1 793 aa16.15■□□□□ 0.18
SIX4-201ENST00000216513 SLFN5Q08AF3 891 aa16.15■□□□□ 0.18
SIX4-201ENST00000216513 GGA1Q9UJY5 639 aa16.15■□□□□ 0.18
SIX4-201ENST00000216513 PICK1Q9NRD5 415 aa16.15■□□□□ 0.18
SIX4-201ENST00000216513 RPRD2Q5VT52 1461 aaKnown RBP16.15■□□□□ 0.18
SIX4-201ENST00000216513 PPM1FP49593 454 aaPredicted RBP16.15■□□□□ 0.18
SIX4-201ENST00000216513 ANKRD1Q15327 319 aa16.15■□□□□ 0.18
SIX4-201ENST00000216513 VSIG10Q8N0Z9 540 aa16.15■□□□□ 0.18
SIX4-201ENST00000216513 FAM89AQ96GI7 184 aa16.15■□□□□ 0.18
SIX4-201ENST00000216513 RNF41Q9H4P4 317 aaPredicted RBP16.15■□□□□ 0.18
SIX4-201ENST00000216513 CHMP5Q9NZZ3 219 aa16.15■□□□□ 0.18
SIX4-201ENST00000216513 SAMM50Q9Y512 469 aa16.15■□□□□ 0.18
SIX4-201ENST00000216513 H7C1D1 291 aa16.14■□□□□ 0.17
SIX4-201ENST00000216513 A1BGP04217 495 aa16.14■□□□□ 0.17
SIX4-201ENST00000216513 KAT14Q9H8E8 782 aa16.14■□□□□ 0.17
SIX4-201ENST00000216513 A0A1W2PP64 1363 aa16.14■□□□□ 0.17
SIX4-201ENST00000216513 PTPRCP08575 1304 aa16.14■□□□□ 0.17
SIX4-201ENST00000216513 PTPRKQ15262 1439 aa16.14■□□□□ 0.17
SIX4-201ENST00000216513 TSPY3P0CV98 308 aa16.14■□□□□ 0.17
SIX4-201ENST00000216513 TSPY8P0CW00 308 aa16.14■□□□□ 0.17
SIX4-201ENST00000216513 PDE6BP35913 854 aa16.14■□□□□ 0.17
SIX4-201ENST00000216513 ALDH1L2Q3SY69 923 aa16.14■□□□□ 0.17
SIX4-201ENST00000216513 BMP2KQ9NSY1 1161 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms