RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 A0A0G2JS52 829 aa20.34■□□□□ 0.85
PTPN18-201ENST00000175756 UVSSAQ2YD98 709 aa20.34■□□□□ 0.85
PTPN18-201ENST00000175756 KLHDC4Q8TBB5 520 aa20.34■□□□□ 0.85
PTPN18-201ENST00000175756 FAM227BQ96M60 508 aa20.34■□□□□ 0.85
PTPN18-201ENST00000175756 CAMSAP1Q5T5Y3 1602 aa20.34■□□□□ 0.85
PTPN18-201ENST00000175756 COL3A1P02461 1466 aaPredicted RBP20.34■□□□□ 0.85
PTPN18-201ENST00000175756 VIRMAQ69YN4 1812 aaKnown RBP20.34■□□□□ 0.85
PTPN18-201ENST00000175756 MLH3Q9UHC1 1453 aa20.33■□□□□ 0.85
PTPN18-201ENST00000175756 CFAP74Q9C0B2 1584 aa20.33■□□□□ 0.84
PTPN18-201ENST00000175756 DDX58O95786 925 aaKnown RBP20.33■□□□□ 0.84
PTPN18-201ENST00000175756 PIP4K2AP48426 406 aaPredicted RBP20.33■□□□□ 0.84
PTPN18-201ENST00000175756 ESCO1Q5FWF5 840 aa20.33■□□□□ 0.84
PTPN18-201ENST00000175756 SDF4Q9BRK5 362 aa20.32■□□□□ 0.84
PTPN18-201ENST00000175756 NDUFB9Q9Y6M9 179 aa20.32■□□□□ 0.84
PTPN18-201ENST00000175756 ATP10DQ9P241 1426 aa20.32■□□□□ 0.84
PTPN18-201ENST00000175756 RAD50Q92878 1312 aa20.32■□□□□ 0.84
PTPN18-201ENST00000175756 ANO6Q4KMQ2 910 aa20.32■□□□□ 0.84
PTPN18-201ENST00000175756 GORABQ5T7V8 394 aa20.32■□□□□ 0.84
PTPN18-201ENST00000175756 PTPRMP28827 1452 aa20.32■□□□□ 0.84
PTPN18-201ENST00000175756 LRRC59Q96AG4 307 aaKnown RBP20.32■□□□□ 0.84
PTPN18-201ENST00000175756 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.31■□□□□ 0.84
PTPN18-201ENST00000175756 PIBF1Q8WXW3 757 aa20.31■□□□□ 0.84
PTPN18-201ENST00000175756 TRMT1Q9NXH9 659 aaKnown RBP20.31■□□□□ 0.84
PTPN18-201ENST00000175756 KIDINS220Q9ULH0 1771 aa20.31■□□□□ 0.84
PTPN18-201ENST00000175756 CCDC73Q6ZRK6 1079 aa20.31■□□□□ 0.84
PTPN18-201ENST00000175756 SH2B1Q9NRF2 756 aaPredicted RBP20.31■□□□□ 0.84
PTPN18-201ENST00000175756 VWDEQ8N2E2 1590 aa20.31■□□□□ 0.84
PTPN18-201ENST00000175756 NMIQ13287 307 aaPredicted RBP20.3■□□□□ 0.84
PTPN18-201ENST00000175756 PPP6R1Q9UPN7 881 aa20.3■□□□□ 0.84
PTPN18-201ENST00000175756 ARAP3Q8WWN8 1544 aa20.3■□□□□ 0.84
PTPN18-201ENST00000175756 ZNF165P49910 485 aa20.3■□□□□ 0.84
PTPN18-201ENST00000175756 GNL2Q13823 731 aaKnown RBP20.3■□□□□ 0.84
PTPN18-201ENST00000175756 CD163L1Q9NR16 1453 aa20.3■□□□□ 0.84
PTPN18-201ENST00000175756 EDC3Q96F86 508 aaKnown RBP20.3■□□□□ 0.84
PTPN18-201ENST00000175756 DNAJC25Q9H1X3 360 aa20.3■□□□□ 0.84
PTPN18-201ENST00000175756 ERC1Q8IUD2 1116 aa20.29■□□□□ 0.84
PTPN18-201ENST00000175756 ME1P48163 572 aa20.29■□□□□ 0.84
PTPN18-201ENST00000175756 FLT4P35916 1363 aa20.29■□□□□ 0.84
PTPN18-201ENST00000175756 AATKQ6ZMQ8 1374 aa20.29■□□□□ 0.84
PTPN18-201ENST00000175756 ADGRB2O60241 1585 aa20.29■□□□□ 0.84
PTPN18-201ENST00000175756 CCT2P78371 535 aaKnown RBP20.29■□□□□ 0.84
PTPN18-201ENST00000175756 TYRO3Q06418 890 aa20.29■□□□□ 0.84
PTPN18-201ENST00000175756 PRIMPOLQ96LW4 560 aa20.29■□□□□ 0.84
PTPN18-201ENST00000175756 ME3Q16798 604 aa20.28■□□□□ 0.84
PTPN18-201ENST00000175756 PLEKHO1Q53GL0 409 aaPredicted RBP20.28■□□□□ 0.84
PTPN18-201ENST00000175756 CREB3L3Q68CJ9 461 aa20.28■□□□□ 0.84
PTPN18-201ENST00000175756 CDC37L1Q7L3B6 337 aa20.28■□□□□ 0.84
PTPN18-201ENST00000175756 CCDC112Q8NEF3 446 aa20.28■□□□□ 0.84
PTPN18-201ENST00000175756 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.28■□□□□ 0.84
PTPN18-201ENST00000175756 V9GYY5 206 aaPredicted RBP20.28■□□□□ 0.84
PTPN18-201ENST00000175756 MROH1Q8NDA8 1641 aa20.28■□□□□ 0.84
PTPN18-201ENST00000175756 TNNT1P13805 278 aa20.28■□□□□ 0.84
PTPN18-201ENST00000175756 MYRIPQ8NFW9 859 aa20.28■□□□□ 0.84
PTPN18-201ENST00000175756 SSH3Q8TE77 659 aa20.28■□□□□ 0.84
PTPN18-201ENST00000175756 DEPDC5O75140 1603 aa20.28■□□□□ 0.84
PTPN18-201ENST00000175756 LIG1P18858 919 aa20.28■□□□□ 0.84
PTPN18-201ENST00000175756 EVI5LQ96CN4 794 aa20.28■□□□□ 0.84
PTPN18-201ENST00000175756 CLIP2Q9UDT6 1046 aa20.28■□□□□ 0.84
PTPN18-201ENST00000175756 PYCARDQ9ULZ3 195 aa20.28■□□□□ 0.84
PTPN18-201ENST00000175756 TPM3P06753 285 aa20.27■□□□□ 0.84
PTPN18-201ENST00000175756 NLRP2Q9NX02 1062 aa20.27■□□□□ 0.84
PTPN18-201ENST00000175756 NEXMIFQ5QGS0 1516 aa20.27■□□□□ 0.84
PTPN18-201ENST00000175756 NRDCO43847 1150 aa20.27■□□□□ 0.84
PTPN18-201ENST00000175756 DBF4Q9UBU7 674 aaPredicted RBP20.27■□□□□ 0.84
PTPN18-201ENST00000175756 A0A0U1RQG5 324 aaPredicted RBP20.26■□□□□ 0.83
PTPN18-201ENST00000175756 RIOK3O14730 519 aaKnown RBP20.26■□□□□ 0.83
PTPN18-201ENST00000175756 KINO60870 393 aaKnown RBP20.26■□□□□ 0.83
PTPN18-201ENST00000175756 TERF1P54274 439 aa20.26■□□□□ 0.83
PTPN18-201ENST00000175756 LRMPQ12912 555 aa20.26■□□□□ 0.83
PTPN18-201ENST00000175756 HOXC9P31274 260 aa20.26■□□□□ 0.83
PTPN18-201ENST00000175756 LARP1Q6PKG0 1096 aaKnown RBP20.26■□□□□ 0.83
PTPN18-201ENST00000175756 FAM200AQ8TCP9 573 aa20.26■□□□□ 0.83
PTPN18-201ENST00000175756 SCAND2PQ9GZW5 306 aaPredicted RBP20.26■□□□□ 0.83
PTPN18-201ENST00000175756 LSG1Q9H089 658 aaKnown RBP20.26■□□□□ 0.83
PTPN18-201ENST00000175756 STAP2Q9UGK3 403 aa20.26■□□□□ 0.83
PTPN18-201ENST00000175756 MTMR6Q9Y217 621 aa20.26■□□□□ 0.83
PTPN18-201ENST00000175756 ARHGEF40Q8TER5 1519 aa20.26■□□□□ 0.83
PTPN18-201ENST00000175756 CDK12Q9NYV4 1490 aaPredicted RBP20.25■□□□□ 0.83
PTPN18-201ENST00000175756 SLC39A6Q13433 755 aa20.25■□□□□ 0.83
PTPN18-201ENST00000175756 RGS12O14924 1447 aa20.25■□□□□ 0.83
PTPN18-201ENST00000175756 ZC3H13Q5T200 1668 aaKnown RBP20.25■□□□□ 0.83
PTPN18-201ENST00000175756 ANKRD1Q15327 319 aa20.25■□□□□ 0.83
PTPN18-201ENST00000175756 ATP7BP35670 1465 aa20.25■□□□□ 0.83
PTPN18-201ENST00000175756 HIP1O00291 1037 aa20.24■□□□□ 0.83
PTPN18-201ENST00000175756 HOMER1Q86YM7 354 aa20.24■□□□□ 0.83
PTPN18-201ENST00000175756 STK11IPQ8N1F8 1099 aa20.24■□□□□ 0.83
PTPN18-201ENST00000175756 LMTK2Q8IWU2 1503 aa20.24■□□□□ 0.83
PTPN18-201ENST00000175756 CCDC94Q9BW85 323 aaPredicted RBP20.24■□□□□ 0.83
PTPN18-201ENST00000175756 SMC2O95347 1197 aa20.24■□□□□ 0.83
PTPN18-201ENST00000175756 TTC6Q86TZ1 520 aa20.24■□□□□ 0.83
PTPN18-201ENST00000175756 RAB11FIP4Q86YS3 637 aa20.24■□□□□ 0.83
PTPN18-201ENST00000175756 HYPKQ9NX55 129 aa20.24■□□□□ 0.83
PTPN18-201ENST00000175756 TPCN1Q9ULQ1 816 aa20.24■□□□□ 0.83
PTPN18-201ENST00000175756 VPS53Q5VIR6 699 aa20.23■□□□□ 0.83
PTPN18-201ENST00000175756 ERCC4Q92889 916 aaPredicted RBP20.23■□□□□ 0.83
PTPN18-201ENST00000175756 BRF1Q92994 677 aa20.23■□□□□ 0.83
PTPN18-201ENST00000175756 MYD88Q99836 296 aa20.23■□□□□ 0.83
PTPN18-201ENST00000175756 CCDC171Q6TFL3 1326 aa20.23■□□□□ 0.83
PTPN18-201ENST00000175756 U2AF2P26368 475 aaKnown RBP eCLIP20.23■□□□□ 0.834e-7■■■■□ 26
PTPN18-201ENST00000175756 LTKP29376 864 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms