RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 ADAMTSL3P82987 1691 aa15.91■□□□□ 0.14
CTNS-201ENST00000046640 GRM8O00222 908 aa15.91■□□□□ 0.14
CTNS-201ENST00000046640 PHKG2P15735 406 aa15.91■□□□□ 0.14
CTNS-201ENST00000046640 CCDC173Q0VFZ6 552 aa15.91■□□□□ 0.14
CTNS-201ENST00000046640 KAZALD1Q96I82 304 aa15.91■□□□□ 0.14
CTNS-201ENST00000046640 MYD88Q99836 296 aa15.91■□□□□ 0.14
CTNS-201ENST00000046640 RBSNQ9H1K0 784 aa15.91■□□□□ 0.14
CTNS-201ENST00000046640 DDX21Q9NR30 783 aaKnown RBP eCLIP15.91■□□□□ 0.14
CTNS-201ENST00000046640 ZNF142P52746 1687 aaPredicted RBP15.91■□□□□ 0.14
CTNS-201ENST00000046640 RGPD5Q99666 1765 aa15.91■□□□□ 0.14
CTNS-201ENST00000046640 CACNA1FO60840 1977 aa15.9■□□□□ 0.14
CTNS-201ENST00000046640 IFIT2P09913 472 aaKnown RBP15.9■□□□□ 0.14
CTNS-201ENST00000046640 PRIM1P49642 420 aaKnown RBP15.9■□□□□ 0.14
CTNS-201ENST00000046640 CHMP4AQ9BY43 222 aa15.9■□□□□ 0.14
CTNS-201ENST00000046640 NSFL1CQ9UNZ2 370 aaKnown RBP15.9■□□□□ 0.14
CTNS-201ENST00000046640 MED1Q15648 1581 aaPredicted RBP15.9■□□□□ 0.14
CTNS-201ENST00000046640 IGKV5-2P06315 115 aa15.9■□□□□ 0.14
CTNS-201ENST00000046640 MSNP26038 577 aaKnown RBP15.9■□□□□ 0.14
CTNS-201ENST00000046640 CNTROBQ8N137 903 aa15.9■□□□□ 0.14
CTNS-201ENST00000046640 RNF214Q8ND24 703 aa15.9■□□□□ 0.14
CTNS-201ENST00000046640 CYP27B1O15528 508 aa15.89■□□□□ 0.13
CTNS-201ENST00000046640 ATP5J2-PTCD1G3V325 749 aa15.89■□□□□ 0.13
CTNS-201ENST00000046640 PTCD1O75127 700 aaKnown RBP15.89■□□□□ 0.13
CTNS-201ENST00000046640 DDX58O95786 925 aaKnown RBP15.89■□□□□ 0.13
CTNS-201ENST00000046640 LINS1Q8NG48 757 aa15.89■□□□□ 0.13
CTNS-201ENST00000046640 GPT2Q8TD30 523 aa15.89■□□□□ 0.13
CTNS-201ENST00000046640 CCDC9Q9Y3X0 531 aaKnown RBP15.89■□□□□ 0.13
CTNS-201ENST00000046640 ALDH1L1O75891 902 aa15.89■□□□□ 0.13
CTNS-201ENST00000046640 KIAA1211Q6ZU35 1233 aa15.89■□□□□ 0.13
CTNS-201ENST00000046640 RASEFQ8IZ41 740 aa15.89■□□□□ 0.13
CTNS-201ENST00000046640 TTC5Q8N0Z6 440 aa15.89■□□□□ 0.13
CTNS-201ENST00000046640 TLR7Q9NYK1 1049 aaKnown RBP15.89■□□□□ 0.13
CTNS-201ENST00000046640 SYCE3A1L190 88 aa15.88■□□□□ 0.13
CTNS-201ENST00000046640 HSP90AB4PQ58FF6 505 aa15.88■□□□□ 0.13
CTNS-201ENST00000046640 CWC22Q9HCG8 908 aaKnown RBP15.88■□□□□ 0.13
CTNS-201ENST00000046640 SLIT3O75094 1523 aa15.88■□□□□ 0.13
CTNS-201ENST00000046640 KDM3BQ7LBC6 1761 aa15.88■□□□□ 0.13
CTNS-201ENST00000046640 SGSM2O43147 1006 aa15.88■□□□□ 0.13
CTNS-201ENST00000046640 EPHA10Q5JZY3 1008 aa15.88■□□□□ 0.13
CTNS-201ENST00000046640 IFNL2Q8IZJ0 200 aa15.88■□□□□ 0.13
CTNS-201ENST00000046640 MPNDQ8N594 471 aa15.88■□□□□ 0.13
CTNS-201ENST00000046640 DIAPH3Q9NSV4 1193 aa15.88■□□□□ 0.13
CTNS-201ENST00000046640 CYP2E1P05181 493 aaPredicted RBP15.87■□□□□ 0.13
CTNS-201ENST00000046640 G3BP1Q13283 466 aaKnown RBP eCLIP15.87■□□□□ 0.13
CTNS-201ENST00000046640 MEGF6O75095 1541 aa15.87■□□□□ 0.13
CTNS-201ENST00000046640 KDM6AO15550 1401 aaPredicted RBP15.87■□□□□ 0.13
CTNS-201ENST00000046640 SASH1O94885 1247 aa15.87■□□□□ 0.13
CTNS-201ENST00000046640 EAF2Q96CJ1 260 aaPredicted RBP15.87■□□□□ 0.13
CTNS-201ENST00000046640 ZMYND15Q9H091 742 aa15.87■□□□□ 0.13
CTNS-201ENST00000046640 LMO7Q8WWI1 1683 aa15.87■□□□□ 0.13
CTNS-201ENST00000046640 HEG1Q9ULI3 1381 aa15.87■□□□□ 0.13
CTNS-201ENST00000046640 BOLA2Q9H3K6 86 aa15.86■□□□□ 0.13
CTNS-201ENST00000046640 ECHDC1Q9NTX5 307 aa15.86■□□□□ 0.13
CTNS-201ENST00000046640 GLRX3O76003 335 aaKnown RBP15.86■□□□□ 0.13
CTNS-201ENST00000046640 HSPA4P34932 840 aa15.86■□□□□ 0.13
CTNS-201ENST00000046640 CABP4P57796 275 aa15.86■□□□□ 0.13
CTNS-201ENST00000046640 PTH1RQ03431 593 aa15.86■□□□□ 0.13
CTNS-201ENST00000046640 NEXNQ0ZGT2 675 aa15.86■□□□□ 0.13
CTNS-201ENST00000046640 ZSCAN30Q86W11 494 aa15.86■□□□□ 0.13
CTNS-201ENST00000046640 GDPD2Q9HCC8 539 aa15.86■□□□□ 0.13
CTNS-201ENST00000046640 NDUFB9Q9Y6M9 179 aa15.86■□□□□ 0.13
CTNS-201ENST00000046640 RBM10P98175 930 aaKnown RBP15.85■□□□□ 0.13
CTNS-201ENST00000046640 SNX14Q9Y5W7 946 aa15.85■□□□□ 0.13
CTNS-201ENST00000046640 AOX1Q06278 1338 aa15.85■□□□□ 0.13
CTNS-201ENST00000046640 NCAPD2Q15021 1401 aa15.85■□□□□ 0.13
CTNS-201ENST00000046640 ANKRD13DQ6ZTN6 518 aa15.85■□□□□ 0.13
CTNS-201ENST00000046640 TMEM63CQ9P1W3 806 aa15.85■□□□□ 0.13
CTNS-201ENST00000046640 MST1RQ04912 1400 aa15.85■□□□□ 0.13
CTNS-201ENST00000046640 NEURL1BA8MQ27 555 aa15.85■□□□□ 0.13
CTNS-201ENST00000046640 MTX1Q13505 466 aa15.85■□□□□ 0.13
CTNS-201ENST00000046640 LARP1Q6PKG0 1096 aaKnown RBP15.85■□□□□ 0.13
CTNS-201ENST00000046640 UBE3BQ7Z3V4 1068 aa15.85■□□□□ 0.13
CTNS-201ENST00000046640 EDC3Q96F86 508 aaKnown RBP15.85■□□□□ 0.13
CTNS-201ENST00000046640 PPP1R9BQ96SB3 815 aa15.85■□□□□ 0.13
CTNS-201ENST00000046640 ARID3AQ99856 593 aa15.85■□□□□ 0.13
CTNS-201ENST00000046640 LSG1Q9H089 658 aaKnown RBP15.85■□□□□ 0.13
CTNS-201ENST00000046640 FAM227BQ96M60 508 aa15.84■□□□□ 0.13
CTNS-201ENST00000046640 GCKRQ14397 625 aa15.84■□□□□ 0.13
CTNS-201ENST00000046640 PRPF40BQ6NWY9 871 aaKnown RBP15.84■□□□□ 0.13
CTNS-201ENST00000046640 CADPS2Q86UW7 1296 aa15.84■□□□□ 0.13
CTNS-201ENST00000046640 R3HCC1Q9Y3T6 440 aaKnown RBP15.84■□□□□ 0.13
CTNS-201ENST00000046640 ANAPC15P60006 121 aa15.83■□□□□ 0.13
CTNS-201ENST00000046640 CLEC17AQ6ZS10 378 aa15.83■□□□□ 0.13
CTNS-201ENST00000046640 RAD50Q92878 1312 aa15.83■□□□□ 0.13
CTNS-201ENST00000046640 TRPM3Q9HCF6 1732 aaPredicted RBP15.83■□□□□ 0.12
CTNS-201ENST00000046640 SNRPA1P09661 255 aaKnown RBP15.83■□□□□ 0.12
CTNS-201ENST00000046640 TOM1L2Q6ZVM7 507 aa15.83■□□□□ 0.12
CTNS-201ENST00000046640 CHMP3Q9Y3E7 222 aa15.83■□□□□ 0.12
CTNS-201ENST00000046640 RRP9O43818 475 aaKnown RBP15.82■□□□□ 0.12
CTNS-201ENST00000046640 CASTP20810 708 aaKnown RBP15.82■□□□□ 0.12
CTNS-201ENST00000046640 ZNF445P59923 1031 aa15.82■□□□□ 0.12
CTNS-201ENST00000046640 ADCK5Q3MIX3 580 aa15.82■□□□□ 0.12
CTNS-201ENST00000046640 PRDM11Q9NQV5 511 aa15.82■□□□□ 0.12
CTNS-201ENST00000046640 STRN4Q9NRL3 753 aa15.82■□□□□ 0.12
CTNS-201ENST00000046640 ZNF330Q9Y3S2 320 aaPredicted RBP15.82■□□□□ 0.12
CTNS-201ENST00000046640 GPATCH3Q96I76 525 aa15.82■□□□□ 0.12
CTNS-201ENST00000046640 DCAF5Q96JK2 942 aa15.82■□□□□ 0.12
CTNS-201ENST00000046640 TTC41PQ6P2S7 1318 aa15.82■□□□□ 0.12
CTNS-201ENST00000046640 KCNJ4P48050 445 aa15.81■□□□□ 0.12
CTNS-201ENST00000046640 AK2P54819 239 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms