RNA–Protein interactions for RNA: ENST00000027335.7

CDH17-201, Transcript of cadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH17, Length 3,693 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-201ENST00000027335 TRAK2O60296 914 aa5.94□□□□□ -1.46
CDH17-201ENST00000027335 MSNP26038 577 aaKnown RBP5.94□□□□□ -1.46
CDH17-201ENST00000027335 CCT4P50991 539 aaKnown RBP5.94□□□□□ -1.46
CDH17-201ENST00000027335 NUTM1Q86Y26 1132 aa5.94□□□□□ -1.46
CDH17-201ENST00000027335 CLASRPQ8N2M8 674 aaKnown RBP5.94□□□□□ -1.46
CDH17-201ENST00000027335 IP6K1Q92551 441 aa5.94□□□□□ -1.46
CDH17-201ENST00000027335 RBM42Q9BTD8 480 aaKnown RBP5.94□□□□□ -1.46
CDH17-201ENST00000027335 TBC1D2Q9BYX2 928 aa5.94□□□□□ -1.46
CDH17-201ENST00000027335 VAMP4O75379 141 aa5.94□□□□□ -1.46
CDH17-201ENST00000027335 MMP14P50281 582 aa5.94□□□□□ -1.46
CDH17-201ENST00000027335 MEIS3Q99687 375 aa5.94□□□□□ -1.46
CDH17-201ENST00000027335 LRRCC1Q9C099 1032 aa5.94□□□□□ -1.46
CDH17-201ENST00000027335 PCDH10Q9P2E7 1040 aa5.94□□□□□ -1.46
CDH17-201ENST00000027335 TTC36A6NLP5 189 aa5.93□□□□□ -1.46
CDH17-201ENST00000027335 FAM177BA6PVY3 158 aa5.93□□□□□ -1.46
CDH17-201ENST00000027335 CABP4P57796 275 aa5.93□□□□□ -1.46
CDH17-201ENST00000027335 TAF7Q15545 349 aaPredicted RBP5.93□□□□□ -1.46
CDH17-201ENST00000027335 C16orf71Q8IYS4 520 aaPredicted RBP5.93□□□□□ -1.46
CDH17-201ENST00000027335 SOS2Q07890 1332 aaPredicted RBP5.93□□□□□ -1.46
CDH17-201ENST00000027335 FOSBP53539 338 aa5.93□□□□□ -1.46
CDH17-201ENST00000027335 CCDC82Q8N4S0 544 aa5.93□□□□□ -1.46
CDH17-201ENST00000027335 SGSM3Q96HU1 749 aa5.93□□□□□ -1.46
CDH17-201ENST00000027335 TOMM22Q9NS69 142 aa5.93□□□□□ -1.46
CDH17-201ENST00000027335 MAP3K5Q99683 1374 aa5.93□□□□□ -1.46
CDH17-201ENST00000027335 VPS37CA5D8V6 355 aaPredicted RBP5.93□□□□□ -1.46
CDH17-201ENST00000027335 RPAP2Q8IXW5 612 aaPredicted RBP5.93□□□□□ -1.46
CDH17-201ENST00000027335 UPF3BQ9BZI7 483 aaKnown RBP5.93□□□□□ -1.46
CDH17-201ENST00000027335 AXIN2Q9Y2T1 843 aa5.93□□□□□ -1.46
CDH17-201ENST00000027335 LRRFIP2Q9Y608 721 aaKnown RBP5.93□□□□□ -1.46
CDH17-201ENST00000027335 ZKSCAN1P17029 563 aaPredicted RBP5.92□□□□□ -1.46
CDH17-201ENST00000027335 FLIIQ13045 1269 aa5.92□□□□□ -1.46
CDH17-201ENST00000027335 CCDC85AQ96PX6 553 aaPredicted RBP5.92□□□□□ -1.46
CDH17-201ENST00000027335 QTRT2Q9H974 415 aaKnown RBP5.92□□□□□ -1.46
CDH17-201ENST00000027335 PXDNQ92626 1479 aa5.92□□□□□ -1.46
CDH17-201ENST00000027335 ZNF521Q96K83 1311 aa5.92□□□□□ -1.46
CDH17-201ENST00000027335 KCNQ3O43525 872 aa5.92□□□□□ -1.46
CDH17-201ENST00000027335 DRC7Q8IY82 874 aa5.92□□□□□ -1.46
CDH17-201ENST00000027335 JARID2Q92833 1246 aaPredicted RBP5.92□□□□□ -1.46
CDH17-201ENST00000027335 FBXW7Q969H0 707 aa5.92□□□□□ -1.46
CDH17-201ENST00000027335 SPG7Q9UQ90 795 aa5.92□□□□□ -1.46
CDH17-201ENST00000027335 SBNO1A3KN83 1393 aa5.92□□□□□ -1.46
CDH17-201ENST00000027335 ERC2O15083 957 aa5.92□□□□□ -1.46
CDH17-201ENST00000027335 GNL2Q13823 731 aaKnown RBP5.92□□□□□ -1.46
CDH17-201ENST00000027335 G2E3Q7L622 706 aa5.92□□□□□ -1.46
CDH17-201ENST00000027335 NBPF11Q86T75 865 aa5.92□□□□□ -1.46
CDH17-201ENST00000027335 ANKRD13AQ8IZ07 590 aa5.92□□□□□ -1.46
CDH17-201ENST00000027335 MRPL50Q8N5N7 158 aaKnown RBP5.92□□□□□ -1.46
CDH17-201ENST00000027335 NFATC2IPQ8NCF5 419 aa5.92□□□□□ -1.46
CDH17-201ENST00000027335 RNF214Q8ND24 703 aa5.92□□□□□ -1.46
CDH17-201ENST00000027335 RUFY2Q8WXA3 655 aa5.92□□□□□ -1.46
CDH17-201ENST00000027335 ATP7BP35670 1465 aa5.91□□□□□ -1.46
CDH17-201ENST00000027335 TBC1D9Q6ZT07 1266 aa5.91□□□□□ -1.46
CDH17-201ENST00000027335 BRINP3Q76B58 766 aa5.91□□□□□ -1.46
CDH17-201ENST00000027335 SP7Q8TDD2 431 aaPredicted RBP5.91□□□□□ -1.46
CDH17-201ENST00000027335 LARP6Q9BRS8 491 aaKnown RBP5.91□□□□□ -1.46
CDH17-201ENST00000027335 FSD1Q9BTV5 496 aa5.91□□□□□ -1.46
CDH17-201ENST00000027335 IL16Q14005 1332 aa5.91□□□□□ -1.46
CDH17-201ENST00000027335 PRPF40AO75400 957 aaKnown RBP5.91□□□□□ -1.46
CDH17-201ENST00000027335 MCM4P33991 863 aa5.91□□□□□ -1.46
CDH17-201ENST00000027335 CAVIN1Q6NZI2 390 aaKnown RBP5.91□□□□□ -1.46
CDH17-201ENST00000027335 CWC27Q6UX04 472 aaKnown RBP5.91□□□□□ -1.46
CDH17-201ENST00000027335 RINLQ6ZS11 566 aa5.91□□□□□ -1.46
CDH17-201ENST00000027335 CEP120Q8N960 986 aa5.91□□□□□ -1.46
CDH17-201ENST00000027335 IL17REQ8NFR9 667 aa5.91□□□□□ -1.46
CDH17-201ENST00000027335 ZNF830Q96NB3 372 aaPredicted RBP5.91□□□□□ -1.46
CDH17-201ENST00000027335 ZBTB40Q9NUA8 1239 aa5.91□□□□□ -1.46
CDH17-201ENST00000027335 BTG4Q9NY30 223 aa5.91□□□□□ -1.46
CDH17-201ENST00000027335 COL14A1Q05707 1796 aaKnown RBP5.91□□□□□ -1.46
CDH17-201ENST00000027335 CRYBG1Q9Y4K1 1723 aa5.91□□□□□ -1.46
CDH17-201ENST00000027335 PI4KAP2A4QPH2 592 aa5.9□□□□□ -1.46
CDH17-201ENST00000027335 K7ELQ4 463 aaPredicted RBP5.9□□□□□ -1.46
CDH17-201ENST00000027335 RABEP1Q15276 862 aa5.9□□□□□ -1.46
CDH17-201ENST00000027335 PI4KAP1Q8N8J0 262 aa5.9□□□□□ -1.46
CDH17-201ENST00000027335 TBC1D32Q96NH3 1257 aa5.9□□□□□ -1.46
CDH17-201ENST00000027335 KDM2BQ8NHM5 1336 aa5.9□□□□□ -1.46
CDH17-201ENST00000027335 MYCNP04198 464 aaPredicted RBP5.9□□□□□ -1.46
CDH17-201ENST00000027335 NUCB2P80303 420 aa5.9□□□□□ -1.46
CDH17-201ENST00000027335 CNTROBQ8N137 903 aa5.9□□□□□ -1.46
CDH17-201ENST00000027335 SYAP1Q96A49 352 aaPredicted RBP5.9□□□□□ -1.46
CDH17-201ENST00000027335 PRDM4Q9UKN5 801 aa5.9□□□□□ -1.46
CDH17-201ENST00000027335 SMC3Q9UQE7 1217 aa5.9□□□□□ -1.46
CDH17-201ENST00000027335 CPSF1Q10570 1443 aaKnown RBP5.9□□□□□ -1.46
CDH17-201ENST00000027335 NUCB1Q02818 461 aa5.9□□□□□ -1.47
CDH17-201ENST00000027335 HDAC1Q13547 482 aaPredicted RBP5.9□□□□□ -1.47
CDH17-201ENST00000027335 NBPF20Q3BBV1 942 aa5.9□□□□□ -1.47
CDH17-201ENST00000027335 RBM26Q5T8P6 1007 aaKnown RBP5.9□□□□□ -1.47
CDH17-201ENST00000027335 ARHGEF25Q86VW2 580 aa5.9□□□□□ -1.47
CDH17-201ENST00000027335 MPNDQ8N594 471 aa5.9□□□□□ -1.47
CDH17-201ENST00000027335 PHAXQ9H814 394 aaKnown RBP5.9□□□□□ -1.47
CDH17-201ENST00000027335 PLSCR2Q9NRY7 297 aa5.9□□□□□ -1.47
CDH17-201ENST00000027335 KIAA1210Q9ULL0 1709 aa5.9□□□□□ -1.47
CDH17-201ENST00000027335 ARHGEF28Q8N1W1 1705 aaKnown RBP5.9□□□□□ -1.47
CDH17-201ENST00000027335 H3BQV1 296 aa5.89□□□□□ -1.47
CDH17-201ENST00000027335 SKOR2Q2VWA4 1001 aaPredicted RBP5.89□□□□□ -1.47
CDH17-201ENST00000027335 AMOTQ4VCS5 1084 aa5.89□□□□□ -1.47
CDH17-201ENST00000027335 AACSQ86V21 672 aa5.89□□□□□ -1.47
CDH17-201ENST00000027335 FAM184AQ8NB25 1140 aa5.89□□□□□ -1.47
CDH17-201ENST00000027335 ACSBG1Q96GR2 724 aa5.89□□□□□ -1.47
CDH17-201ENST00000027335 C8orf37Q96NL8 207 aa5.89□□□□□ -1.47
CDH17-201ENST00000027335 TRAIPQ9BWF2 469 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms