RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 ME1P48163 572 aa12.18□□□□□ -0.46
NIPAL3-201ENST00000003912 TRAPPC3LQ5T215 181 aa12.18□□□□□ -0.46
NIPAL3-201ENST00000003912 CARD14Q9BXL6 1004 aa12.18□□□□□ -0.46
NIPAL3-201ENST00000003912 GOLIM4O00461 696 aa12.18□□□□□ -0.46
NIPAL3-201ENST00000003912 TNIP1Q15025 636 aa12.18□□□□□ -0.46
NIPAL3-201ENST00000003912 ODF2Q5BJF6 829 aa12.18□□□□□ -0.46
NIPAL3-201ENST00000003912 CABP5Q9NP86 173 aa12.18□□□□□ -0.46
NIPAL3-201ENST00000003912 USP21Q9UK80 565 aa12.18□□□□□ -0.46
NIPAL3-201ENST00000003912 STIM1Q13586 685 aa12.18□□□□□ -0.46
NIPAL3-201ENST00000003912 CCDC96Q2M329 555 aa12.18□□□□□ -0.46
NIPAL3-201ENST00000003912 FILIP1LQ4L180 1135 aa12.18□□□□□ -0.46
NIPAL3-201ENST00000003912 CCAR2Q8N163 923 aaKnown RBP12.17□□□□□ -0.46
NIPAL3-201ENST00000003912 JARID2Q92833 1246 aaPredicted RBP12.17□□□□□ -0.46
NIPAL3-201ENST00000003912 LINS1Q8NG48 757 aa12.17□□□□□ -0.46
NIPAL3-201ENST00000003912 PIBF1Q8WXW3 757 aa12.17□□□□□ -0.46
NIPAL3-201ENST00000003912 CCNL1Q9UK58 526 aaPredicted RBP12.17□□□□□ -0.46
NIPAL3-201ENST00000003912 ZHX3Q9H4I2 956 aa12.17□□□□□ -0.46
NIPAL3-201ENST00000003912 CFAP45Q9UL16 551 aa12.17□□□□□ -0.46
NIPAL3-201ENST00000003912 CHD1O14646 1710 aa12.17□□□□□ -0.46
NIPAL3-201ENST00000003912 PLEKHG3A1L390 1219 aa12.17□□□□□ -0.46
NIPAL3-201ENST00000003912 GNPATO15228 680 aa12.17□□□□□ -0.46
NIPAL3-201ENST00000003912 PDE4BQ07343 736 aa12.17□□□□□ -0.46
NIPAL3-201ENST00000003912 C20orf194Q5TEA3 1177 aa12.17□□□□□ -0.46
NIPAL3-201ENST00000003912 IL15P40933 162 aaPredicted RBP12.17□□□□□ -0.46
NIPAL3-201ENST00000003912 ATP2B3Q16720 1220 aa12.17□□□□□ -0.46
NIPAL3-201ENST00000003912 ZNF804AQ7Z570 1209 aa12.17□□□□□ -0.46
NIPAL3-201ENST00000003912 OGFOD1Q8N543 542 aa12.17□□□□□ -0.46
NIPAL3-201ENST00000003912 CEP131Q9UPN4 1083 aa12.17□□□□□ -0.46
NIPAL3-201ENST00000003912 NAP1L1P55209 391 aaKnown RBP12.16□□□□□ -0.46
NIPAL3-201ENST00000003912 LMBR1LQ6UX01 489 aa12.16□□□□□ -0.46
NIPAL3-201ENST00000003912 C8orf58Q8NAV2 365 aa12.16□□□□□ -0.46
NIPAL3-201ENST00000003912 FEZ1Q99689 392 aa12.16□□□□□ -0.46
NIPAL3-201ENST00000003912 BACH2Q9BYV9 841 aa12.16□□□□□ -0.46
NIPAL3-201ENST00000003912 CRNKL1Q9BZJ0 848 aaKnown RBP12.16□□□□□ -0.46
NIPAL3-201ENST00000003912 DACH1Q9UI36 760 aa12.16□□□□□ -0.46
NIPAL3-201ENST00000003912 MLH3Q9UHC1 1453 aa12.16□□□□□ -0.46
NIPAL3-201ENST00000003912 HOMER1Q86YM7 354 aa12.16□□□□□ -0.46
NIPAL3-201ENST00000003912 SNRKQ9NRH2 765 aa12.16□□□□□ -0.46
NIPAL3-201ENST00000003912 CUL5Q93034 780 aa12.16□□□□□ -0.46
NIPAL3-201ENST00000003912 SLC12A7Q9Y666 1083 aa12.16□□□□□ -0.46
NIPAL3-201ENST00000003912 FAM98CQ17RN3 349 aaKnown RBP12.16□□□□□ -0.46
NIPAL3-201ENST00000003912 BABAM1Q9NWV8 329 aa12.16□□□□□ -0.46
NIPAL3-201ENST00000003912 PRPF40AO75400 957 aaKnown RBP12.15□□□□□ -0.46
NIPAL3-201ENST00000003912 NPHP4O75161 1426 aaPredicted RBP12.15□□□□□ -0.46
NIPAL3-201ENST00000003912 KDM5DQ9BY66 1539 aa12.15□□□□□ -0.46
NIPAL3-201ENST00000003912 CATIPQ7Z7H3 387 aa12.15□□□□□ -0.46
NIPAL3-201ENST00000003912 MRPL50Q8N5N7 158 aaKnown RBP12.15□□□□□ -0.46
NIPAL3-201ENST00000003912 RHPN1Q8TCX5 695 aa12.15□□□□□ -0.46
NIPAL3-201ENST00000003912 EHMT1Q9H9B1 1298 aa12.15□□□□□ -0.46
NIPAL3-201ENST00000003912 PLEKHG1Q9ULL1 1385 aa12.15□□□□□ -0.46
NIPAL3-201ENST00000003912 EFCAB6Q5THR3 1501 aa12.15□□□□□ -0.47
NIPAL3-201ENST00000003912 IFIT3O14879 490 aaKnown RBP12.14□□□□□ -0.47
NIPAL3-201ENST00000003912 ZFYP08048 801 aaPredicted RBP12.14□□□□□ -0.47
NIPAL3-201ENST00000003912 EYA3Q99504 573 aa12.14□□□□□ -0.47
NIPAL3-201ENST00000003912 IRS4O14654 1257 aaPredicted RBP12.14□□□□□ -0.47
NIPAL3-201ENST00000003912 JDP2Q8WYK2 163 aa12.14□□□□□ -0.47
NIPAL3-201ENST00000003912 ZC3H12CQ9C0D7 883 aaKnown RBP12.14□□□□□ -0.47
NIPAL3-201ENST00000003912 SSBP05455 408 aaKnown RBP eCLIP12.14□□□□□ -0.47
NIPAL3-201ENST00000003912 RSPH6AQ9H0K4 717 aa12.14□□□□□ -0.47
NIPAL3-201ENST00000003912 WDR78Q5VTH9 848 aa12.14□□□□□ -0.47
NIPAL3-201ENST00000003912 ANKRD2Q9GZV1 360 aa12.14□□□□□ -0.47
NIPAL3-201ENST00000003912 SH2B1Q9NRF2 756 aaPredicted RBP12.14□□□□□ -0.47
NIPAL3-201ENST00000003912 SYCP1Q15431 976 aa12.14□□□□□ -0.47
NIPAL3-201ENST00000003912 PDILTQ8N807 584 aa12.14□□□□□ -0.47
NIPAL3-201ENST00000003912 ADGBQ8N7X0 1667 aa12.13□□□□□ -0.47
NIPAL3-201ENST00000003912 TMEM94Q12767 1356 aa12.13□□□□□ -0.47
NIPAL3-201ENST00000003912 PPP4R3BQ5MIZ7 849 aa12.13□□□□□ -0.47
NIPAL3-201ENST00000003912 KRI1Q8N9T8 703 aaKnown RBP12.13□□□□□ -0.47
NIPAL3-201ENST00000003912 SPATA32Q96LK8 384 aa12.13□□□□□ -0.47
NIPAL3-201ENST00000003912 MEIS3Q99687 375 aa12.13□□□□□ -0.47
NIPAL3-201ENST00000003912 PARP10Q53GL7 1025 aa12.13□□□□□ -0.47
NIPAL3-201ENST00000003912 ZNF790Q6PG37 636 aa12.13□□□□□ -0.47
NIPAL3-201ENST00000003912 DDX17Q92841 729 aaKnown RBP12.13□□□□□ -0.47
NIPAL3-201ENST00000003912 DDX11Q96FC9 970 aa12.13□□□□□ -0.47
NIPAL3-201ENST00000003912 PHACTR3Q96KR7 559 aa12.13□□□□□ -0.47
NIPAL3-201ENST00000003912 MBD5Q9P267 1494 aa12.13□□□□□ -0.47
NIPAL3-201ENST00000003912 TSPY2A6NKD2 308 aa12.13□□□□□ -0.47
NIPAL3-201ENST00000003912 KIF5BP33176 963 aa12.13□□□□□ -0.47
NIPAL3-201ENST00000003912 RBM17Q96I25 401 aaKnown RBP12.13□□□□□ -0.47
NIPAL3-201ENST00000003912 DDX21Q9NR30 783 aaKnown RBP eCLIP12.13□□□□□ -0.47
NIPAL3-201ENST00000003912 SMARCE1Q969G3 411 aa12.12□□□□□ -0.47
NIPAL3-201ENST00000003912 ZCCHC11Q5TAX3 1644 aaKnown RBP12.12□□□□□ -0.47
NIPAL3-201ENST00000003912 CAVIN1Q6NZI2 390 aaKnown RBP12.12□□□□□ -0.47
NIPAL3-201ENST00000003912 MFSD6Q6ZSS7 791 aa12.12□□□□□ -0.47
NIPAL3-201ENST00000003912 ZNF592Q92610 1267 aa12.12□□□□□ -0.47
NIPAL3-201ENST00000003912 IL13P35225 146 aa12.12□□□□□ -0.47
NIPAL3-201ENST00000003912 ATP8B2P98198 1209 aa12.12□□□□□ -0.47
NIPAL3-201ENST00000003912 ZFYVE27Q5T4F4 411 aa12.12□□□□□ -0.47
NIPAL3-201ENST00000003912 NPC1L1Q9UHC9 1359 aa12.12□□□□□ -0.47
NIPAL3-201ENST00000003912 MAGI3Q5TCQ9 1506 aa12.12□□□□□ -0.47
NIPAL3-201ENST00000003912 UGGT1Q9NYU2 1555 aa12.12□□□□□ -0.47
NIPAL3-201ENST00000003912 CNBD1Q8NA66 436 aa12.12□□□□□ -0.47
NIPAL3-201ENST00000003912 SAMD9LQ8IVG5 1584 aa12.12□□□□□ -0.47
NIPAL3-201ENST00000003912 GOLGA8AA7E2F4 631 aa12.11□□□□□ -0.47
NIPAL3-201ENST00000003912 GOLGA8BA8MQT2 603 aa12.11□□□□□ -0.47
NIPAL3-201ENST00000003912 CCDC12Q8WUD4 166 aaPredicted RBP12.11□□□□□ -0.47
NIPAL3-201ENST00000003912 CCDC178Q5BJE1 867 aa12.11□□□□□ -0.47
NIPAL3-201ENST00000003912 CEP57L1Q8IYX8 460 aa12.11□□□□□ -0.47
NIPAL3-201ENST00000003912 PHAXQ9H814 394 aaKnown RBP12.11□□□□□ -0.47
NIPAL3-201ENST00000003912 CIZ1Q9ULV3 898 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms