RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Q8BT18 775 aa12.54□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Mlh1Q9JK91 760 aa12.54□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Gprasp1Q5U4C1 1347 aa12.54□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Irgm2A0A140LIF8 407 aa12.54□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Trim55G3X8Y1 545 aa12.54□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Ube2hP62257 183 aa12.54□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Frat2Q8K025 231 aa12.54□□□□□ -0.4
Rnf40-201ENSMUST00000033088 SelenooQ9DBC0 667 aa12.54□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Plekhg1F6S200 1446 aa12.54□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Anp32cQ64G17 123 aa12.54□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Exoc8Q6PGF7 716 aa12.54□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Cfap99A0A140LIX9 648 aa12.53□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Tyro3P55144 880 aa12.53□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Slc26a8Q8R0C3 999 aa12.53□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Snw1Q9CSN1 536 aaKnown RBP12.53□□□□□ -0.4
Rnf40-201ENSMUST00000033088 PplQ9R269 1755 aa12.53□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Gm45015A0A140LII9 184 aa12.53□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Gm18336A0A140LIU8 765 aa12.53□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Mkrn3Q60764 544 aa12.53□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Zfp397Q7TNK4 527 aa12.53□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Ppp6r3Q922D4 844 aa12.53□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Gemin5Q8BX17 1502 aaKnown RBP12.52□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Dnajc25A2ALW5 357 aa12.52□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Erich4Q3UNU4 136 aa12.52□□□□□ -0.4
Rnf40-201ENSMUST00000033088 4930548H24RikQ9D496 437 aa12.52□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Ftsj3Q9DBE9 838 aaKnown RBP12.52□□□□□ -0.4
Rnf40-201ENSMUST00000033088 CenphQ9QYM8 241 aa12.52□□□□□ -0.4
Rnf40-201ENSMUST00000033088 Ccdc34Q3UI66 367 aa12.52□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Pnpla2Q8BJ56 486 aa12.52□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Gm3409A0A0G2JE67 319 aa12.52□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Cfap58B2RW38 873 aa12.52□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Nap1l1P28656 391 aaKnown RBP12.52□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Pde3bQ61409 1100 aa12.52□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Dusp9Q7TNL7 452 aa12.52□□□□□ -0.41
Rnf40-201ENSMUST00000033088 ZwintQ9CQU5 252 aa12.52□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Vamp4O70480 141 aa12.51□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Fam107bQ3TGF2 131 aa12.51□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Nol10Q5RJG1 687 aaKnown RBP12.51□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Wdr33Q8K4P0 1330 aaKnown RBP12.51□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Asxl2Q8BZ32 1370 aa12.51□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Dip2aQ8BWT5 1523 aa12.51□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Pa2g4P50580 394 aaKnown RBP12.51□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Kiaa1211Q5PR69 1207 aa12.51□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Tut1Q8R3F9 869 aa12.51□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Lonp2Q9DBN5 852 aa12.51□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Tex14Q7M6U3 1450 aa12.51□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Gm21969J3QJZ1 289 aa12.51□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Gng11P61953 73 aa12.51□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Hand2Q61039 217 aa12.51□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Pdzrn3Q69ZS0 1063 aa12.51□□□□□ -0.41
Rnf40-201ENSMUST00000033088 BbxQ8VBW5 907 aa12.51□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Sf3a3Q9D554 501 aaKnown RBP12.51□□□□□ -0.41
Rnf40-201ENSMUST00000033088 RestQ8VIG1 1082 aa12.5□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Cwc15Q9JHS9 229 aaKnown RBP12.5□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Chd2E9PZM4 1827 aaKnown RBP12.5□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Zap70P43404 618 aa12.5□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Ankrd40Q5SUE8 363 aa12.5□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Maats1Q8BRC6 783 aa12.5□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Def6Q8C2K1 630 aa12.5□□□□□ -0.41
Rnf40-201ENSMUST00000033088 CenppQ9CZ92 286 aa12.5□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Dhx8A2A4P0 1244 aaKnown RBP12.5□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Me1P06801 572 aa12.5□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Znf526Q8BI66 675 aa12.5□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Tbc1d7Q9D0K0 293 aa12.5□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Cep170bQ80U49 1574 aa12.49□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Nom1Q3UFM5 854 aaKnown RBP12.49□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Ifit1Q64282 463 aa12.49□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Cep57l1Q8VDS7 400 aa12.49□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Elf2Q9JHC9 593 aa12.49□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Spty2d1Q68FG3 682 aa12.49□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Ccdc181Q80ZU5 509 aa12.49□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Arid5bQ8BM75 1188 aaKnown RBP12.49□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Kif2cQ922S8 721 aa12.49□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Psma5Q9Z2U1 241 aaKnown RBP12.49□□□□□ -0.41
Rnf40-201ENSMUST00000033088 NmiO35309 314 aa12.49□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Tpm4Q6IRU2 248 aa12.49□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Pms1Q8K119 917 aa12.49□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Luzp1Q8R4U7 1068 aaKnown RBP12.49□□□□□ -0.41
Rnf40-201ENSMUST00000033088 LifrP42703 1092 aa12.48□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Esyt1Q3U7R1 1092 aaKnown RBP12.48□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Zc3h6Q8BYK8 1177 aa12.48□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Zscan29E9Q5B4 869 aa12.48□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Sycp1Q62209 993 aa12.48□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Atp1a2Q6PIE5 1020 aa12.48□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Trerf1Q8BXJ2 1205 aa12.48□□□□□ -0.41
Rnf40-201ENSMUST00000033088 LlphQ9D945 130 aaKnown RBP12.48□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Gcom1E9PZ54 550 aa12.48□□□□□ -0.41
Rnf40-201ENSMUST00000033088 MyzapQ3UIJ9 466 aa12.48□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Atp1a3Q6PIC6 1013 aa12.48□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Actn3O88990 900 aaKnown RBP12.47□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Zmynd15Q8C0R7 736 aa12.47□□□□□ -0.41
Rnf40-201ENSMUST00000033088 FanciQ8K368 1330 aa12.47□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Samsn1P57725 372 aa12.47□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Edc3Q8K2D3 508 aaKnown RBP12.47□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Themis2Q91YX0 663 aa12.47□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Ubash3aQ3V3E1 624 aa12.47□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Znf653Q6YND2 615 aa12.47□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Ercc6lQ8BHK9 1240 aa12.47□□□□□ -0.41
Rnf40-201ENSMUST00000033088 Rufy1Q8BIJ7 712 aa12.47□□□□□ -0.41
Rnf40-201ENSMUST00000033088 EspnlQ3UYR4 1005 aa12.46□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms