RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-233	ENST00000642021	IKBIP	Q70UQ0	350 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	OTUB1	Q96FW1	271 aa	Predicted RBP	13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	FUZ	Q9BT04	418 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	SRR	Q9GZT4	340 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	ZBP1	Q9H171	429 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	EPHX3	Q9H6B9	360 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	WDR70	Q9NW82	654 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	NDUFB11	Q9NX14	153 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	DKK3	Q9UBP4	350 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	SEC14L4	Q9UDX3	406 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	ZNF221	Q9UK13	617 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	STUB1	Q9UNE7	303 aa		13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	YARS2	Q9Y2Z4	477 aa	Known RBP	13.11	□□□□□ -0.31
PHGDH-233	ENST00000642021	SMIM30	A4D0T7	59 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	UGT2B17	O75795	530 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	CDRT1	O95170	752 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	APOL3	O95236	402 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	IL7	P13232	177 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	PTPN2	P17706	415 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	ITGB7	P26010	798 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	NNMT	P40261	264 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	MAPK12	P53778	367 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	MEDAG	Q5VYS4	303 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	ACSM5	Q6NUN0	579 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	BPHL	Q86WA6	291 aa	Predicted RBP	13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	MEX3D	Q86XN8	651 aa	Known RBP	13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	AMER3	Q8N944	861 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	OR8J1	Q8NGP2	316 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	EXOSC8	Q96B26	276 aa	Known RBP	13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	ST6GAL2	Q96JF0	529 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	DMRTB1	Q96MA1	342 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	MMP28	Q9H239	520 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	CREBZF	Q9NS37	354 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	SEMA3G	Q9NS98	782 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	CUEDC1	Q9NWM3	386 aa	Predicted RBP	13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	MAFF	Q9ULX9	164 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	A4GNT	Q9UNA3	340 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	ASF1A	Q9Y294	204 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	BOLA1	Q9Y3E2	137 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	RPL36	Q9Y3U8	105 aa	Known RBP	13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	CDH23	Q9H251	3354 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021		A0A1W2PQ09	198 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	FEZF1	A0PJY2	475 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	HYKK	A2RU49	373 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021		M0R3H8	397 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	TFEC	O14948	347 aa	Predicted RBP	13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	PAPLN	O95428	1278 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	FH	P07954	510 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	MSL3P1	P0C860	447 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	PTGER1	P34995	402 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	BSG	P35613	385 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	ETV5	P41161	510 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	ETV1	P50549	477 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	WDR5	P61964	334 aa	Known RBP	13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	CNTN1	Q12860	1018 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	LARS2	Q15031	903 aa	Known RBP	13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	RAET1G	Q6H3X3	334 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	ZNF544	Q6NX49	715 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	CNKSR3	Q6P9H4	555 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	ZER1	Q7Z7L7	766 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	KRT73	Q86Y46	540 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	PROKR2	Q8NFJ6	384 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	OR5D16	Q8NGK9	328 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	OR5P2	Q8WZ92	322 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	TMCO6	Q96DC7	493 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	ZNF354B	Q96LW1	612 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	ZSWIM3	Q96MP5	696 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	MND1	Q9BWT6	205 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	MIXL1	Q9H2W2	232 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	ABCB9	Q9NP78	766 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	LHX9	Q9NQ69	397 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	SAGE1	Q9NXZ1	904 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	PCDHGB2	Q9Y5G2	931 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	NOX1	Q9Y5S8	564 aa		13.1	□□□□□ -0.31
PHGDH-233	ENST00000642021	FAAH	O00519	579 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	RGS13	O14921	159 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	PPM1D	O15297	605 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	PI15	O43692	258 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	SH3BP5	O60239	455 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	FGF18	O76093	207 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	ENPP1	P22413	925 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	S100A1	P23297	94 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	PCBP4	P57723	403 aa	Known RBP	13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	SLAMF1	Q13291	335 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	HEPACAM	Q14CZ8	416 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	ARMC4	Q5T2S8	1044 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	PODNL1	Q6PEZ8	512 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	ZNF517	Q6ZMY9	492 aa	Predicted RBP	13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	GDPGP1	Q6ZNW5	385 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	SLC30A8	Q8IWU4	369 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	TREX2	Q9BQ50	279 aa	Predicted RBP	13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	CTPS2	Q9NRF8	586 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	TXNL4B	Q9NX01	149 aa	Known RBP	13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	MYO7A	Q13402	2215 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	PDPK1	O15530	556 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	TMPRSS11D	O60235	418 aa		13.09	□□□□□ -0.31
PHGDH-233	ENST00000642021	MMP20	O60882	483 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 55 ms