RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	UBFD1	O14562	309 aa	Known RBP	13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	OR6B1	O95007	311 aa		13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	CHN1	P15882	459 aa		13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	SOX3	P41225	446 aa		13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	HTR6	P50406	440 aa		13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	KCNK10	P57789	538 aa		13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	TRA2B	P62995	288 aa	Known RBP	13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	ERVK-8	P63133	956 aa		13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	ALDH6A1	Q02252	535 aa	Known RBP	13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	ZNF267	Q14586	743 aa	Predicted RBP	13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	LIPM	Q5VYY2	423 aa		13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	MDGA2	Q7Z553	956 aa		13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	C9orf40	Q8IXQ3	194 aa		13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	NUBPL	Q8TB37	319 aa		13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	TM4SF18	Q96CE8	201 aa		13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	APOPT1	Q96IL0	206 aa		13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	PSMG3-AS1	Q96PY0	264 aa		13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	PARD6B	Q9BYG5	372 aa		13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	IQCG	Q9H095	443 aa	Known RBP	13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	TIMMDC1	Q9NPL8	285 aa		13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	HPF1	Q9NWY4	346 aa		13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	ERVK-19	Q9WJR5	959 aa		13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939	PLLP	Q9Y342	182 aa		13.94	□□□□□ -0.18
PHGDH-231	ENST00000641939		A0A1W2PS29	197 aa		13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	SERTM1	A2A2V5	107 aa		13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	KLRC4-KLRK1	H3BQV0	150 aa		13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	UNC5C	O95185	931 aa		13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	XK	P51811	444 aa		13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	FOXA1	P55317	472 aa		13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	MPEG1	Q2M385	716 aa		13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	C4orf17	Q53FE4	359 aa		13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	SPIN4	Q56A73	249 aa		13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	IL20RB	Q6UXL0	311 aa		13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	RNF111	Q6ZNA4	994 aa		13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	SULF2	Q8IWU5	870 aa		13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	SRRM1	Q8IYB3	904 aa	Known RBP	13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	MREG	Q8N565	214 aa		13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	CPSF7	Q8N684	471 aa	Known RBP	13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	BANP	Q8N9N5	519 aa		13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	POGLUT1	Q8NBL1	392 aa		13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	DOK4	Q8TEW6	326 aa		13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	FAIM2	Q9BWQ8	316 aa		13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	CXorf21	Q9HAI6	301 aa		13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	MCM8	Q9UJA3	840 aa		13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	CES1P1	Q9UKY3	287 aa		13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	NIN	Q8N4C6	2090 aa		13.93	□□□□□ -0.18
PHGDH-231	ENST00000641939	GOLGA6L10	A6NI86	522 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	OR6C76	A6NM76	312 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	PEX1	O43933	1283 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	CRCP	O75575	148 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	WISP2	O76076	250 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	LDLR	P01130	860 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	STS	P08842	583 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	RNF224	P0DH78	156 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	CPM	P14384	443 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	POR	P16435	677 aa	Predicted RBP	13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	DEK	P35659	375 aa	Known RBP	13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	MEOX1	P50221	254 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	SLC37A1	P57057	533 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	HMGCS1	Q01581	520 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	ACSM2A	Q08AH3	577 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	ASPH	Q12797	758 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	PCLAF	Q15004	111 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	KRTCAP3	Q53RY4	240 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	PIGG	Q5H8A4	983 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	ACSM2B	Q68CK6	577 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	SLC48A1	Q6P1K1	146 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	OPN5	Q6U736	354 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	SCIMP	Q6UWF3	145 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	SLC29A4	Q7RTT9	530 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	C10orf107	Q8IVU9	208 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	GALNT12	Q8IXK2	581 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	PSD4	Q8NDX1	1056 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	APIP	Q96GX9	242 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	GPR137	Q96N19	417 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	TMEM109	Q9BVC6	243 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	PSME2	Q9UL46	239 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	NAV2	Q8IVL1	2488 aa		13.92	□□□□□ -0.18
PHGDH-231	ENST00000641939	EXPH5	Q8NEV8	1989 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939		A0A1B0GUH1	482 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	WIPF3	A6NGB9	483 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	NPIPA5	E9PKD4	350 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	LRRTM2	O43300	516 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	PCDH7	O60245	1069 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	ZNF354A	O60765	605 aa	Predicted RBP	13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	TRIM13	O60858	407 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	ERAL1	O75616	437 aa	Known RBP	13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	UROS	P10746	265 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	ZNF24	P17028	368 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	ALDH9A1	P49189	494 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	RAE1	P78406	368 aa	Known RBP	13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	BTK	Q06187	659 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	RBPJ	Q06330	500 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	ZNF750	Q32MQ0	723 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	SPDYA	Q5MJ70	313 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	C6orf163	Q5TEZ5	329 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	RTL4	Q6ZR62	310 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	SIAH3	Q8IW03	269 aa		13.91	□□□□□ -0.18
PHGDH-231	ENST00000641939	MMP21	Q8N119	569 aa		13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms