RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 NTN4Q9HB63 628 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 ANKHQ9HCJ1 492 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 PDE7BQ9NP56 450 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 SLC35C2Q9NQQ7 365 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 ZSCAN32Q9NX65 697 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 NLGN3Q9NZ94 848 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 IFT80Q9P2H3 777 aaPredicted RBP8.37□□□□□ -1.07
PHGDH-219ENST00000641513 GMEB2Q9UKD1 530 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 BLOC1S6Q9UL45 172 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 PSME2Q9UL46 239 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 CLCA2Q9UQC9 943 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 MAP4K5Q9Y4K4 846 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 ZNF780BQ9Y6R6 833 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 SPACA6W5XKT8 324 aa8.37□□□□□ -1.07
PHGDH-219ENST00000641513 NUP210LQ5VU65 1888 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 IGHV1OR21-1A0A087WYE8 117 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 WASHC1A8K0Z3 465 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 A8MU76 341 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 PATE3B3GLJ2 98 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 PGRMC2O15173 223 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 YKT6O15498 198 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 PROM1O43490 865 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 HCRTR1O43613 425 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 NUDT21O43809 227 aaKnown RBP8.36□□□□□ -1.07
PHGDH-219ENST00000641513 TPST1O60507 370 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 TBX19O60806 448 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 C8orf89P0DMQ9 161 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 GPX2P18283 190 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 CNR2P34972 360 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 FEN1P39748 380 aaKnown RBP8.36□□□□□ -1.07
PHGDH-219ENST00000641513 PRIM2P49643 509 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 SEPHS1P49903 392 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 GZMMP51124 257 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 PPP2R2BQ00005 443 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 TNFRSF17Q02223 184 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 NDUFA9Q16795 377 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 LRRC23Q53EV4 343 aaPredicted RBP8.36□□□□□ -1.07
PHGDH-219ENST00000641513 TRIM61Q5EBN2 209 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 MANEAQ5SRI9 462 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 GCNT6Q5T4J0 391 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 LINC00299Q6ZSB3 139 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 USP53Q70EK8 1073 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 GPR155Q7Z3F1 870 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 HIPK1Q86Z02 1210 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 ZDHHC13Q8IUH4 622 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 PLXDC1Q8IUK5 500 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 C10orf111Q8N326 155 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 ZNF786Q8N393 782 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 DNAJC22Q8N4W6 341 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 EID2Q8N6I1 236 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 OR2I1PQ8NGU4 316 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 OR5K1Q8NHB7 308 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 GOT1L1Q8NHS2 421 aaPredicted RBP8.36□□□□□ -1.07
PHGDH-219ENST00000641513 CEP76Q8TAP6 659 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 ZNF566Q969W8 418 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 CCDC74AQ96AQ1 378 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 NMD3Q96D46 503 aaKnown RBP8.36□□□□□ -1.07
PHGDH-219ENST00000641513 NRBF2Q96F24 287 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 ZC3H10Q96K80 434 aaKnown RBP8.36□□□□□ -1.07
PHGDH-219ENST00000641513 RNF145Q96MT1 663 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 CD180Q99467 661 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 DPH2Q9BQC3 489 aaPredicted RBP8.36□□□□□ -1.07
PHGDH-219ENST00000641513 GTPBP2Q9BX10 602 aaKnown RBP8.36□□□□□ -1.07
PHGDH-219ENST00000641513 TMEM121BQ9BXQ6 578 aaPredicted RBP8.36□□□□□ -1.07
PHGDH-219ENST00000641513 CXorf36Q9H7Y0 433 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 SLAMF7Q9NQ25 335 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 DCAF13Q9NV06 445 aaKnown RBP8.36□□□□□ -1.07
PHGDH-219ENST00000641513 EHD3Q9NZN3 535 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 FAF1Q9UNN5 650 aaPredicted RBP8.36□□□□□ -1.07
PHGDH-219ENST00000641513 PLCL2Q9UPR0 1127 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 ERVK-11Q9UQG0 969 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 MRPS2Q9Y399 296 aaKnown RBP8.36□□□□□ -1.07
PHGDH-219ENST00000641513 NAALAD2Q9Y3Q0 740 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 HSPE1-MOB4S4R3N1 261 aa8.36□□□□□ -1.07
PHGDH-219ENST00000641513 ASXL3Q9C0F0 2248 aa8.35□□□□□ -1.07
PHGDH-219ENST00000641513 IGHV5-51A0A0C4DH38 117 aa8.35□□□□□ -1.07
PHGDH-219ENST00000641513 SGK494L7N484 410 aa8.35□□□□□ -1.07
PHGDH-219ENST00000641513 PLOD2O00469 737 aa8.35□□□□□ -1.07
PHGDH-219ENST00000641513 SLC16A6O15403 523 aa8.35□□□□□ -1.07
PHGDH-219ENST00000641513 B4GAT1O43505 415 aa8.35□□□□□ -1.07
PHGDH-219ENST00000641513 SRPX2O60687 465 aaPredicted RBP8.35□□□□□ -1.07
PHGDH-219ENST00000641513 RDH16O75452 317 aa8.35□□□□□ -1.07
PHGDH-219ENST00000641513 CREG1O75629 220 aa8.35□□□□□ -1.07
PHGDH-219ENST00000641513 KCNK5O95279 499 aa8.35□□□□□ -1.07
PHGDH-219ENST00000641513 ZBTB11O95625 1053 aaPredicted RBP8.35□□□□□ -1.07
PHGDH-219ENST00000641513 ZNF682O95780 498 aa8.35□□□□□ -1.07
PHGDH-219ENST00000641513 CER1O95813 267 aa8.35□□□□□ -1.07
PHGDH-219ENST00000641513 SERPINA1P01009 418 aa8.35□□□□□ -1.07
PHGDH-219ENST00000641513 SYPP08247 313 aa8.35□□□□□ -1.07
PHGDH-219ENST00000641513 GNAO1P09471 354 aa8.35□□□□□ -1.07
PHGDH-219ENST00000641513 SP9P0CG40 484 aa8.35□□□□□ -1.07
PHGDH-219ENST00000641513 SMIM10L1P0DMW3 83 aa8.35□□□□□ -1.07
PHGDH-219ENST00000641513 ITGAMP11215 1152 aa8.35□□□□□ -1.07
PHGDH-219ENST00000641513 ETFAP13804 333 aa8.35□□□□□ -1.07
PHGDH-219ENST00000641513 CSNK2A2P19784 350 aaPredicted RBP8.35□□□□□ -1.07
PHGDH-219ENST00000641513 PTGER1P34995 402 aa8.35□□□□□ -1.07
PHGDH-219ENST00000641513 GPR3P46089 330 aa8.35□□□□□ -1.07
PHGDH-219ENST00000641513 PRKAG1P54619 331 aa8.35□□□□□ -1.07
PHGDH-219ENST00000641513 TMBIM6P55061 237 aa8.35□□□□□ -1.07
PHGDH-219ENST00000641513 LIM2P55344 173 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms