RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 SIRT6Q8N6T7 355 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 B3GNT7Q8NFL0 401 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 ADCY4Q8NFM4 1077 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 OR14A16Q8NHC5 309 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 SUN3Q8TAQ9 357 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 SLC2A12Q8TD20 617 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 BRIX1Q8TDN6 353 aaKnown RBP12.31□□□□□ -0.44
GTF3A-209ENST00000640289 ELP5Q8TE02 316 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 DAZLQ92904 295 aaKnown RBP12.31□□□□□ -0.44
GTF3A-209ENST00000640289 RIT1Q92963 219 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 CIDECQ96AQ7 238 aaPredicted RBP12.31□□□□□ -0.44
GTF3A-209ENST00000640289 PPCDCQ96CD2 204 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 ZNF317Q96PQ6 595 aaPredicted RBP12.31□□□□□ -0.44
GTF3A-209ENST00000640289 PELOQ9BRX2 385 aaKnown RBP12.31□□□□□ -0.44
GTF3A-209ENST00000640289 CNPPD1Q9BV87 410 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 NUDT9Q9BW91 350 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 OR8D2Q9GZM6 311 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 LHPPQ9H008 270 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 KCNK13Q9HB14 408 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 MMP25Q9NPA2 562 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 SLAMF7Q9NQ25 335 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 TCF7L2Q9NQB0 619 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 GIMAP4Q9NUV9 329 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 AIG1Q9NVV5 245 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 FAM53CQ9NYF3 392 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 SH3BP4Q9P0V3 963 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 ATP6V1HQ9UI12 483 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 ZNF223Q9UK11 482 aaPredicted RBP12.31□□□□□ -0.44
GTF3A-209ENST00000640289 PPIEQ9UNP9 301 aaKnown RBP12.31□□□□□ -0.44
GTF3A-209ENST00000640289 ENTPD4Q9Y227 616 aa12.31□□□□□ -0.44
GTF3A-209ENST00000640289 SCN2AQ99250 2005 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 PTPRQQ9UMZ3 2332 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 MYO1GB0I1T2 1018 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 E9PBE3 544 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 K7EM74 188 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 ANKRD28O15084 1053 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 UBDO15205 165 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 POLR3GO15318 223 aaPredicted RBP12.3□□□□□ -0.44
GTF3A-209ENST00000640289 PRKNO60260 465 aaPredicted RBP12.3□□□□□ -0.44
GTF3A-209ENST00000640289 KLHL41O60662 606 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 TBX19O60806 448 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 CEACAM4O75871 244 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 ATP1B1P05026 303 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 ICAM2P13598 275 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 EFNA1P20827 205 aaPredicted RBP12.3□□□□□ -0.44
GTF3A-209ENST00000640289 CLDN8P56748 225 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 SOX8P57073 446 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 SPRED3Q2MJR0 410 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 B3GNTL1Q67FW5 361 aaPredicted RBP12.3□□□□□ -0.44
GTF3A-209ENST00000640289 FAM111BQ6SJ93 734 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 PCSK4Q6UW60 755 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 GALNT12Q8IXK2 581 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 RIMKLAQ8IXN7 391 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 EXD3Q8N9H8 876 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 MORN4Q8NDC4 146 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 C7orf57Q8NEG2 295 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 OR9A2Q8NGT5 310 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 ZNF721Q8TF20 911 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 PSMF1Q92530 271 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 SENP5Q96HI0 755 aaPredicted RBP12.3□□□□□ -0.44
GTF3A-209ENST00000640289 BBS4Q96RK4 519 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 DPY30Q9C005 99 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 BRINP2Q9C0B6 783 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 GLIPR2Q9H4G4 154 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 ZNF552Q9H707 407 aaPredicted RBP12.3□□□□□ -0.44
GTF3A-209ENST00000640289 CXorf21Q9HAI6 301 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 GPR83Q9NYM4 423 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 TAS2R7Q9NYW3 318 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 MAT2BQ9NZL9 334 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 ERVK-19Q9WJR5 959 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 GPR45Q9Y5Y3 372 aa12.3□□□□□ -0.44
GTF3A-209ENST00000640289 A0A0G2JND7 137 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 TRBV11-1A0A0K0K1C0 115 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 A8MUI8 341 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 C9JVG2 144 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 ERVH48-1M5A8F1 160 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 PDPK1O15530 556 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 MAN1A2O60476 641 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 PDGFAP04085 211 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 CLPSP04118 112 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 IGKV3-11P04433 115 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 LAMP1P11279 417 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 PRPS1L1P21108 318 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 IL12AP29459 219 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 NTSP30990 170 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 SSTR4P31391 388 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 GALNSP34059 522 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 HPCAL1P37235 193 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 CLCN2P51788 898 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 NCBP2P52298 156 aaKnown RBP eCLIP12.29□□□□□ -0.44
GTF3A-209ENST00000640289 UFM1P61960 85 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 MRPS35P82673 323 aaKnown RBP12.29□□□□□ -0.44
GTF3A-209ENST00000640289 MGAT2Q10469 447 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 MYBPC3Q14896 1274 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 PRICKLE4Q2TBC4 344 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 TRMT12Q53H54 448 aaKnown RBP12.29□□□□□ -0.44
GTF3A-209ENST00000640289 FCRLBQ6BAA4 426 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 R3HCC1LQ7Z5L2 792 aaKnown RBP12.29□□□□□ -0.44
GTF3A-209ENST00000640289 SAMD14Q8IZD0 417 aaPredicted RBP12.29□□□□□ -0.44
GTF3A-209ENST00000640289 SIMC1Q8NDZ2 872 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms