RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 RIOK2Q9BVS4 552 aaKnown RBP3.08□□□□□ -1.92
CCDC7-213ENST00000639290 TMPRSS13Q9BYE2 586 aa3.08□□□□□ -1.92
CCDC7-213ENST00000639290 GPR63Q9BZJ6 419 aa3.08□□□□□ -1.92
CCDC7-213ENST00000639290 XAB2Q9HCS7 855 aaKnown RBP3.08□□□□□ -1.92
CCDC7-213ENST00000639290 PKD2L2Q9NZM6 624 aa3.08□□□□□ -1.92
CCDC7-213ENST00000639290 RSPH14Q9UHP6 348 aa3.08□□□□□ -1.92
CCDC7-213ENST00000639290 ADAM29Q9UKF5 820 aa3.08□□□□□ -1.92
CCDC7-213ENST00000639290 NUP50Q9UKX7 468 aa3.08□□□□□ -1.92
CCDC7-213ENST00000639290 NENFQ9UMX5 172 aa3.08□□□□□ -1.92
CCDC7-213ENST00000639290 POMT1Q9Y6A1 747 aa3.08□□□□□ -1.92
CCDC7-213ENST00000639290 hCG_1807616A0A1W2PRN6 198 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 HMX3A6NHT5 357 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 TARM1B6A8C7 271 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 GTPBP1O00178 669 aaKnown RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 TXNDC9O14530 226 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 SGTAO43765 313 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 HPNP05981 417 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 TPM2P07951 284 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 UGT2B7P16662 529 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 DDX5P17844 614 aaKnown RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 ATP5DP30049 168 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 ACVRL1P37023 503 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 OR1D4P47884 311 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 CCR9P51686 369 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 HNRNPH2P55795 449 aaKnown RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 RPL26P61254 145 aaKnown RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 IFI35P80217 286 aaPredicted RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 TRIM25Q14258 630 aaKnown RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 ZIC1Q15915 447 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 ODF2Q5BJF6 829 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 PAPD4Q6PIY7 484 aaKnown RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 LCTLQ6UWM7 567 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 Q6ZS46 218 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 BBS12Q6ZW61 710 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 FAM214BQ7L5A3 538 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 CHD1LQ86WJ1 897 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 LYSMD2Q8IV50 215 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 ADGRF3Q8IZF5 1079 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 MAPKAPK5-AS1Q8N8E1 139 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 NEU4Q8WWR8 484 aaPredicted RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 MARS2Q96GW9 593 aaKnown RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 SNX22Q96L94 193 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 SYNCQ9H7C4 482 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 UPF2Q9HAU5 1272 aaKnown RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 ZNHIT6Q9NWK9 470 aaKnown RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 SMOXQ9NWM0 555 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 PIH1D1Q9NWS0 290 aaKnown RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 OR6C2Q9NZP2 312 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 RPS6KA6Q9UK32 745 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 RPL26L1Q9UNX3 145 aaKnown RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 TMEM5Q9Y2B1 443 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 MEGF11A6BM72 1044 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 PINLYPA6NC86 204 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 A8MVJ9 347 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 ARHGEF33A8MVX0 844 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 SRRM5B3KS81 715 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 POC1B-GALNT4F8VUJ3 575 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 RTCAO00442 366 aaKnown RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 BTN3A3O00478 584 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 AP3D1O14617 1153 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 PIP5K1BO14986 540 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 TSPAN9O75954 239 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 GSTM1P09488 218 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 GSPT1P15170 499 aaKnown RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 CD68P34810 354 aaPredicted RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 MAGEA8P43361 318 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 NUMBP49757 651 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 ZP4Q12836 540 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 FOXF2Q12947 444 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 MORF4L2Q15014 288 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 RRAGBQ5VZM2 374 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 ARL6IP4Q66PJ3 421 aaKnown RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 CES3Q6UWW8 571 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 CCDC91Q7Z6B0 441 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 COMTD1Q86VU5 262 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 TSPYL5Q86VY4 417 aaPredicted RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 MUC15Q8N387 334 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 GALNT4Q8N4A0 578 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 TRAM1L1Q8N609 369 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 DTX3Q8N9I9 347 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 ZNF397Q8NF99 534 aaPredicted RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 GOLGA5Q8TBA6 731 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 RHBDF1Q96CC6 855 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 ZC3HAV1LQ96H79 300 aaKnown RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 ZNF845Q96IR2 970 aaPredicted RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 FOXN4Q96NZ1 517 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 OR2A14Q96R47 310 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 NUP85Q9BW27 656 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 OR2AG1Q9H205 316 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 WDCPQ9H6R7 721 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 PDFQ9HBH1 243 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 NOX4Q9NPH5 578 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 CCDC177Q9NQR7 707 aaPredicted RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 EIF2B3Q9NR50 452 aaKnown RBP3.07□□□□□ -1.92
CCDC7-213ENST00000639290 HPF1Q9NWY4 346 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 SLC17A7Q9P2U7 560 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 PRODH2Q9UF12 536 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 PRSS50Q9UI38 385 aa3.07□□□□□ -1.92
CCDC7-213ENST00000639290 PPIEQ9UNP9 301 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms