RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 CLNS1AP54105 237 aaKnown RBP14.95□□□□□ -0.02
CLN6-216ENST00000636876 NME5P56597 212 aa14.95□□□□□ -0.02
CLN6-216ENST00000636876 CXADRP78310 365 aa14.95□□□□□ -0.02
CLN6-216ENST00000636876 DUSP2Q05923 314 aa14.95□□□□□ -0.02
CLN6-216ENST00000636876 CEBPEQ15744 281 aa14.95□□□□□ -0.02
CLN6-216ENST00000636876 DCAF10Q5QP82 559 aa14.95□□□□□ -0.02
CLN6-216ENST00000636876 CPLX4Q7Z7G2 160 aa14.95□□□□□ -0.02
CLN6-216ENST00000636876 LRRC25Q8N386 305 aaPredicted RBP14.95□□□□□ -0.02
CLN6-216ENST00000636876 TMEM102Q8N9M5 508 aaPredicted RBP14.95□□□□□ -0.02
CLN6-216ENST00000636876 OR14A16Q8NHC5 309 aa14.95□□□□□ -0.02
CLN6-216ENST00000636876 PTPMT1Q8WUK0 201 aaPredicted RBP14.95□□□□□ -0.02
CLN6-216ENST00000636876 NUDT8Q8WV74 236 aa14.95□□□□□ -0.02
CLN6-216ENST00000636876 C10orf82Q8WW14 230 aa14.95□□□□□ -0.02
CLN6-216ENST00000636876 PPWD1Q96BP3 646 aaKnown RBP14.95□□□□□ -0.02
CLN6-216ENST00000636876 COQ8BQ96D53 544 aa14.95□□□□□ -0.02
CLN6-216ENST00000636876 RBM18Q96H35 190 aaKnown RBP14.95□□□□□ -0.02
CLN6-216ENST00000636876 IMMP1LQ96LU5 166 aa14.95□□□□□ -0.02
CLN6-216ENST00000636876 FER1L6-AS2Q96M78 137 aa14.95□□□□□ -0.02
CLN6-216ENST00000636876 BBS4Q96RK4 519 aa14.95□□□□□ -0.02
CLN6-216ENST00000636876 PRPF18Q99633 342 aaKnown RBP14.95□□□□□ -0.02
CLN6-216ENST00000636876 ELAC2Q9BQ52 826 aaKnown RBP14.95□□□□□ -0.02
CLN6-216ENST00000636876 FAM107BQ9H098 131 aa14.95□□□□□ -0.02
CLN6-216ENST00000636876 ZNF160Q9HCG1 818 aa14.95□□□□□ -0.02
CLN6-216ENST00000636876 SDR39U1Q9NRG7 319 aaPredicted RBP14.95□□□□□ -0.02
CLN6-216ENST00000636876 SH3BP4Q9P0V3 963 aa14.95□□□□□ -0.02
CLN6-216ENST00000636876 ADAM21Q9UKJ8 722 aa14.95□□□□□ -0.02
CLN6-216ENST00000636876 MED13Q9UHV7 2174 aa14.95□□□□□ -0.02
CLN6-216ENST00000636876 ARGFXA6NJG6 315 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 MYO1GB0I1T2 1018 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 PDPK1O15530 556 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 SHOX2O60902 331 aaPredicted RBP14.94□□□□□ -0.02
CLN6-216ENST00000636876 ATP1B1P05026 303 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 LAMP1P11279 417 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 TNNI3P19429 210 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 NTSP30990 170 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 MRPL19P49406 292 aaKnown RBP14.94□□□□□ -0.02
CLN6-216ENST00000636876 ATP4BP51164 291 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 RRADP55042 308 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 SLC26A5P58743 744 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 STX1BP61266 288 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 UFM1P61960 85 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 IRX1P78414 480 aaPredicted RBP14.94□□□□□ -0.02
CLN6-216ENST00000636876 EXT1Q16394 746 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 MPEG1Q2M385 716 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 CPTPQ5TA50 214 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 METTL21CQ5VZV1 264 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 PLAG1Q6DJT9 500 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 C19orf48Q6RUI8 117 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 DGAT2L6Q6ZPD8 337 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 SPATA21Q7Z572 469 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 CAMKMTQ7Z624 323 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 MIER2Q8N344 545 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 NFAM1Q8NET5 270 aaPredicted RBP14.94□□□□□ -0.02
CLN6-216ENST00000636876 DAZLQ92904 295 aaKnown RBP14.94□□□□□ -0.02
CLN6-216ENST00000636876 TESCQ96BS2 214 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 TEX37Q96LM6 180 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 CLMPQ9H6B4 373 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 CXorf21Q9HAI6 301 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 ATAD3AQ9NVI7 634 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 ZIM2Q9NZV7 527 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 TRIM33Q9UPN9 1127 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 CLCA3PQ9Y6N3 262 aa14.94□□□□□ -0.02
CLN6-216ENST00000636876 C17orf105B2RV13 164 aa14.93□□□□□ -0.02
CLN6-216ENST00000636876 MASP2O00187 686 aa14.93□□□□□ -0.02
CLN6-216ENST00000636876 DYRK3O43781 588 aa14.93□□□□□ -0.02
CLN6-216ENST00000636876 NCF2P19878 526 aaPredicted RBP14.93□□□□□ -0.02
CLN6-216ENST00000636876 NT5EP21589 574 aa14.93□□□□□ -0.02
CLN6-216ENST00000636876 GPX3P22352 226 aa14.93□□□□□ -0.02
CLN6-216ENST00000636876 IL12AP29459 219 aa14.93□□□□□ -0.02
CLN6-216ENST00000636876 MPIP34949 423 aa14.93□□□□□ -0.02
CLN6-216ENST00000636876 SRSF11Q05519 484 aaKnown RBP14.93□□□□□ -0.02
CLN6-216ENST00000636876 CHAF1BQ13112 559 aa14.93□□□□□ -0.02
CLN6-216ENST00000636876 SPRED3Q2MJR0 410 aa14.93□□□□□ -0.02
CLN6-216ENST00000636876 CCDC116Q8IYX3 515 aa14.93□□□□□ -0.02
CLN6-216ENST00000636876 MORN4Q8NDC4 146 aa14.93□□□□□ -0.02
CLN6-216ENST00000636876 SUN3Q8TAQ9 357 aa14.93□□□□□ -0.02
CLN6-216ENST00000636876 RIT1Q92963 219 aa14.93□□□□□ -0.02
CLN6-216ENST00000636876 CIDECQ96AQ7 238 aaPredicted RBP14.93□□□□□ -0.02
CLN6-216ENST00000636876 CRELD1Q96HD1 420 aa14.93□□□□□ -0.02
CLN6-216ENST00000636876 AMDHD1Q96NU7 426 aa14.93□□□□□ -0.02
CLN6-216ENST00000636876 ZBTB18Q99592 522 aa14.93□□□□□ -0.02
CLN6-216ENST00000636876 EPN3Q9H201 632 aa14.93□□□□□ -0.02
CLN6-216ENST00000636876 ZNF385DQ9H6B1 395 aa14.93□□□□□ -0.02
CLN6-216ENST00000636876 ATP13A2Q9NQ11 1180 aa14.93□□□□□ -0.02
CLN6-216ENST00000636876 SLAMF7Q9NQ25 335 aa14.93□□□□□ -0.02
CLN6-216ENST00000636876 PPIEQ9UNP9 301 aaKnown RBP14.93□□□□□ -0.02
CLN6-216ENST00000636876 COPG1Q9Y678 874 aaKnown RBP14.93□□□□□ -0.02
CLN6-216ENST00000636876 KCNMB2Q9Y691 235 aa14.93□□□□□ -0.02
CLN6-216ENST00000636876 SNX3O60493 162 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 SLC22A3O75751 556 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 DDAH2O95865 285 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 ICAM2P13598 275 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 FRKP42685 505 aaPredicted RBP14.92□□□□□ -0.02
CLN6-216ENST00000636876 PGDP52209 483 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 NCBP2P52298 156 aaKnown RBP eCLIP14.92□□□□□ -0.02
CLN6-216ENST00000636876 Q0VFX4 171 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 AIMP2Q13155 320 aaKnown RBP14.92□□□□□ -0.02
CLN6-216ENST00000636876 SQLEQ14534 574 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 ZNF267Q14586 743 aaPredicted RBP14.92□□□□□ -0.02
CLN6-216ENST00000636876 LTB4RQ15722 352 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms