RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 SULF2Q8IWU5 870 aa17.03■□□□□ 0.32
CLN6-214ENST00000636314 METTL4Q8N3J2 472 aa17.03■□□□□ 0.32
CLN6-214ENST00000636314 PSD4Q8NDX1 1056 aa17.03■□□□□ 0.32
CLN6-214ENST00000636314 ZNF382Q96SR6 550 aa17.03■□□□□ 0.32
CLN6-214ENST00000636314 PPCSQ9HAB8 311 aa17.03■□□□□ 0.32
CLN6-214ENST00000636314 BRF2Q9HAW0 419 aa17.03■□□□□ 0.32
CLN6-214ENST00000636314 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.03■□□□□ 0.32
CLN6-214ENST00000636314 TEX10Q9NXF1 929 aaPredicted RBP17.03■□□□□ 0.32
CLN6-214ENST00000636314 DCDC2Q9UHG0 476 aa17.03■□□□□ 0.32
CLN6-214ENST00000636314 STK38LQ9Y2H1 464 aa17.03■□□□□ 0.32
CLN6-214ENST00000636314 SMIM23A6NLE4 172 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 TFECO14948 347 aaPredicted RBP17.02■□□□□ 0.32
CLN6-214ENST00000636314 PEX1O43933 1283 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 GLRA3O75311 464 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 WISP2O76076 250 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 IGKV3-11P04433 115 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 KRT15P19012 456 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 IMPDH1P20839 514 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 SLCO1A2P46721 670 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 MAPK12P53778 367 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 PRKAA2P54646 552 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 ERVK-8P63133 956 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 ADORA2A-AS1P86434 159 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 C3AR1Q16581 482 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 SPRED3Q2MJR0 410 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 DGAT2L6Q6ZPD8 337 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 COMMD6Q7Z4G1 85 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 GHDCQ8N2G8 530 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 CDYL2Q8N8U2 506 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 NUBPLQ8TB37 319 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.02■□□□□ 0.322e-7■■■■■ 68.1
CLN6-214ENST00000636314 RIT1Q92963 219 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 HBEGFQ99075 208 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 NMRK1Q9NWW6 199 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 ZNF225Q9UK10 706 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 ERVK-19Q9WJR5 959 aa17.02■□□□□ 0.32
CLN6-214ENST00000636314 A0A1W2PPM1 405 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 WASHC1A8K0Z3 465 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 HRKO00198 91 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 ASNA1O43681 348 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 GUCY1B2O75343 617 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 KRT6AP02538 564 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 KRT6BP04259 564 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 PIK3R1P27986 724 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 HMOX2P30519 316 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 RFC3P40938 356 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 KRT6CP48668 564 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 SMSP52788 366 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 ZNF267Q14586 743 aaPredicted RBP17.01■□□□□ 0.31
CLN6-214ENST00000636314 RNFT1Q5M7Z0 435 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 TCHHL1Q5QJ38 904 aaPredicted RBP17.01■□□□□ 0.31
CLN6-214ENST00000636314 NDUFAF5Q5TEU4 345 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 FAM219BQ5XKK7 198 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 OPN5Q6U736 354 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 RNF111Q6ZNA4 994 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 RTL4Q6ZR62 310 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 C9orf40Q8IXQ3 194 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 SLC22A8Q8TCC7 542 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 DOK4Q8TEW6 326 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 UCN3Q969E3 161 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 L3HYPDHQ96EM0 354 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 TINAGQ9UJW2 476 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 CCDC168Q8NDH2 2452 aa17.01■□□□□ 0.31
CLN6-214ENST00000636314 MANBAO00462 879 aa17■□□□□ 0.31
CLN6-214ENST00000636314 PGRMC2O15173 223 aa17■□□□□ 0.31
CLN6-214ENST00000636314 SLC35E2P0CK97 266 aa17■□□□□ 0.31
CLN6-214ENST00000636314 MYL2P10916 166 aa17■□□□□ 0.31
CLN6-214ENST00000636314 HSD3B1P14060 373 aa17■□□□□ 0.31
CLN6-214ENST00000636314 ABOP16442 354 aa17■□□□□ 0.31
CLN6-214ENST00000636314 HSD3B2P26439 372 aa17■□□□□ 0.31
CLN6-214ENST00000636314 SSTR2P30874 369 aa17■□□□□ 0.31
CLN6-214ENST00000636314 GALNSP34059 522 aa17■□□□□ 0.31
CLN6-214ENST00000636314 GALNT1Q10472 559 aaPredicted RBP17■□□□□ 0.31
CLN6-214ENST00000636314 ASPHQ12797 758 aa17■□□□□ 0.31
CLN6-214ENST00000636314 CSTF3Q12996 717 aaKnown RBP17■□□□□ 0.31
CLN6-214ENST00000636314 LCP2Q13094 533 aa17■□□□□ 0.31
CLN6-214ENST00000636314 MPEG1Q2M385 716 aa17■□□□□ 0.31
CLN6-214ENST00000636314 SLC29A4Q7RTT9 530 aa17■□□□□ 0.31
CLN6-214ENST00000636314 TDRPQ86YL5 185 aa17■□□□□ 0.31
CLN6-214ENST00000636314 ZNF295-AS1Q8N0V1 137 aa17■□□□□ 0.31
CLN6-214ENST00000636314 ZFP62Q8NB50 900 aaPredicted RBP17■□□□□ 0.31
CLN6-214ENST00000636314 EPS8L3Q8TE67 593 aaKnown RBP17■□□□□ 0.31
CLN6-214ENST00000636314 CCDC126Q96EE4 140 aa17■□□□□ 0.31
CLN6-214ENST00000636314 GAL3ST4Q96RP7 486 aa17■□□□□ 0.31
CLN6-214ENST00000636314 EMCNQ9ULC0 261 aa17■□□□□ 0.31
CLN6-214ENST00000636314 GTF3C1Q12789 2109 aa17■□□□□ 0.31
CLN6-214ENST00000636314 FOXO6A8MYZ6 492 aa16.99■□□□□ 0.31
CLN6-214ENST00000636314 C19orf84I3L1E1 186 aa16.99■□□□□ 0.31
CLN6-214ENST00000636314 PKNOX1P55347 436 aa16.99■□□□□ 0.31
CLN6-214ENST00000636314 HSF1Q00613 529 aa16.99■□□□□ 0.31
CLN6-214ENST00000636314 TBL3Q12788 808 aaKnown RBP16.99■□□□□ 0.31
CLN6-214ENST00000636314 C6orf163Q5TEZ5 329 aa16.99■□□□□ 0.31
CLN6-214ENST00000636314 ZYG11AQ6WRX3 759 aa16.99■□□□□ 0.31
CLN6-214ENST00000636314 SPPL2CQ8IUH8 684 aa16.99■□□□□ 0.31
CLN6-214ENST00000636314 GALNT12Q8IXK2 581 aa16.99■□□□□ 0.31
CLN6-214ENST00000636314 C1orf52Q8N6N3 182 aaKnown RBP16.99■□□□□ 0.31
CLN6-214ENST00000636314 CCNYL1Q8N7R7 359 aa16.99■□□□□ 0.31
CLN6-214ENST00000636314 GOLM1Q8NBJ4 401 aa16.99■□□□□ 0.31
CLN6-214ENST00000636314 OR4K14Q8NGD5 310 aa16.99■□□□□ 0.31
CLN6-214ENST00000636314 C16orf52Q8NHV5 167 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms