RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 ZDHHC11Q9H8X9 412 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 SEMA4BQ9NPR2 832 aaPredicted RBP16.57■□□□□ 0.24
PNKP-225ENST00000636214 PLSCR2Q9NRY7 297 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 ZNF358Q9NW07 568 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 ZNF180Q9UJW8 692 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 PCTPQ9UKL6 214 aa16.57■□□□□ 0.24
PNKP-225ENST00000636214 BOKQ9UMX3 212 aaPredicted RBP16.57■□□□□ 0.24
PNKP-225ENST00000636214 INTS1Q8N201 2190 aaKnown RBP16.57■□□□□ 0.24
PNKP-225ENST00000636214 EXOC1LA0A1B0GW35 172 aa16.56■□□□□ 0.24
PNKP-225ENST00000636214 PINLYPA6NC86 204 aa16.56■□□□□ 0.24
PNKP-225ENST00000636214 OR6C76A6NM76 312 aa16.56■□□□□ 0.24
PNKP-225ENST00000636214 FIGNL2A6NMB9 653 aa16.56■□□□□ 0.24
PNKP-225ENST00000636214 KIF2AO00139 706 aaPredicted RBP16.56■□□□□ 0.24
PNKP-225ENST00000636214 BCKDKO14874 412 aa16.56■□□□□ 0.24
PNKP-225ENST00000636214 GUCY1B2O75343 617 aa16.56■□□□□ 0.24
PNKP-225ENST00000636214 IGKV3-11P04433 115 aa16.56■□□□□ 0.24
PNKP-225ENST00000636214 CCL3P10147 92 aa16.56■□□□□ 0.24
PNKP-225ENST00000636214 MAGEA12P43365 314 aa16.56■□□□□ 0.24
PNKP-225ENST00000636214 DNASE1L1P49184 302 aa16.56■□□□□ 0.24
PNKP-225ENST00000636214 KCNJ2P63252 427 aa16.56■□□□□ 0.24
PNKP-225ENST00000636214 MRM1Q6IN84 353 aaKnown RBP16.56■□□□□ 0.24
PNKP-225ENST00000636214 NOA1Q8NC60 698 aaKnown RBP16.56■□□□□ 0.24
PNKP-225ENST00000636214 OR52B6Q8NGF0 335 aa16.56■□□□□ 0.24
PNKP-225ENST00000636214 CHTF18Q8WVB6 975 aa16.56■□□□□ 0.24
PNKP-225ENST00000636214 ZNF717Q9BY31 904 aaPredicted RBP16.56■□□□□ 0.24
PNKP-225ENST00000636214 ASB4Q9Y574 426 aa16.56■□□□□ 0.24
PNKP-225ENST00000636214 ATP6AP2A0A1C7CYW4 349 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 A0A1W2PR48 441 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 OR14I1A6ND48 311 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 CAPN14A8MX76 684 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 OR7A17O14581 309 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 ADAM10O14672 748 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 ATP6AP2O75787 350 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 OTCP00480 354 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 GBAP04062 536 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 SNRPAP09012 282 aaKnown RBP16.55■□□□□ 0.24
PNKP-225ENST00000636214 SLC35E2P0CK97 266 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 TAC1P20366 129 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 GALNSP34059 522 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 MAGEA5P43359 124 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 MAN2A2P49641 1150 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 SLC10A1Q14973 349 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 SGO1Q5FBB7 561 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 TEX35Q5T0J7 233 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 CCNYL2Q5T2Q4 361 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 UBAP2Q5T6F2 1119 aaKnown RBP16.55■□□□□ 0.24
PNKP-225ENST00000636214 ACAD11Q709F0 780 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 GALNT12Q8IXK2 581 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 TMEM251Q8N6I4 163 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 DOK4Q8TEW6 326 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 WWTR1Q9GZV5 400 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 NMRK1Q9NWW6 199 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 TUBA8Q9NY65 449 aaPredicted RBP16.55■□□□□ 0.24
PNKP-225ENST00000636214 B4GALT7Q9UBV7 327 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 ADAM29Q9UKF5 820 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 ACAD8Q9UKU7 415 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 SNX6Q9UNH7 406 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.55■□□□□ 0.24
PNKP-225ENST00000636214 NINQ8N4C6 2090 aa16.55■□□□□ 0.24
PNKP-225ENST00000636214 PHF3Q92576 2039 aaKnown RBP16.55■□□□□ 0.24
PNKP-225ENST00000636214 C2orf92A0A1B0GVN3 265 aa16.54■□□□□ 0.24
PNKP-225ENST00000636214 HRKO00198 91 aa16.54■□□□□ 0.24
PNKP-225ENST00000636214 TP53I11O14683 189 aa16.54■□□□□ 0.24
PNKP-225ENST00000636214 GLSO94925 669 aaPredicted RBP16.54■□□□□ 0.24
PNKP-225ENST00000636214 KLK1P06870 262 aa16.54■□□□□ 0.24
PNKP-225ENST00000636214 SSTR2P30874 369 aa16.54■□□□□ 0.24
PNKP-225ENST00000636214 CHRNB4P30926 498 aa16.54■□□□□ 0.24
PNKP-225ENST00000636214 DEKP35659 375 aaKnown RBP16.54■□□□□ 0.24
PNKP-225ENST00000636214 PIGAP37287 484 aa16.54■□□□□ 0.24
PNKP-225ENST00000636214 TMED10P49755 219 aaKnown RBP16.54■□□□□ 0.24
PNKP-225ENST00000636214 MAPK12P53778 367 aa16.54■□□□□ 0.24
PNKP-225ENST00000636214 NRG3P56975 720 aa16.54■□□□□ 0.24
PNKP-225ENST00000636214 TRAF3Q13114 568 aa16.54■□□□□ 0.24
PNKP-225ENST00000636214 GGTA1PQ4G0N0 100 aa16.54■□□□□ 0.24
PNKP-225ENST00000636214 PRAMEF20Q5VT98 475 aa16.54■□□□□ 0.24
PNKP-225ENST00000636214 DGAT2L6Q6ZPD8 337 aa16.54■□□□□ 0.24
PNKP-225ENST00000636214 OR4K14Q8NGD5 310 aa16.54■□□□□ 0.24
PNKP-225ENST00000636214 DCAKDQ8WVC6 231 aa16.54■□□□□ 0.24
PNKP-225ENST00000636214 SELENOMQ8WWX9 145 aa16.54■□□□□ 0.24
PNKP-225ENST00000636214 SARAFQ96BY9 339 aa16.54■□□□□ 0.24
PNKP-225ENST00000636214 NSUN5Q96P11 429 aaKnown RBP16.54■□□□□ 0.24
PNKP-225ENST00000636214 CNIH4Q9P003 139 aa16.54■□□□□ 0.24
PNKP-225ENST00000636214 SLC12A4Q9UP95 1085 aa16.54■□□□□ 0.24
PNKP-225ENST00000636214 ADGRG4Q8IZF6 3080 aa16.53■□□□□ 0.24
PNKP-225ENST00000636214 GOLGA6L10A6NI86 522 aa16.53■□□□□ 0.24
PNKP-225ENST00000636214 C19orf84I3L1E1 186 aa16.53■□□□□ 0.24
PNKP-225ENST00000636214 ZNF354AO60765 605 aaPredicted RBP16.53■□□□□ 0.24
PNKP-225ENST00000636214 IGHG3P01860 377 aa16.53■□□□□ 0.24
PNKP-225ENST00000636214 RPS17P08708 135 aaKnown RBP16.53■□□□□ 0.24
PNKP-225ENST00000636214 KRT15P19012 456 aa16.53■□□□□ 0.24
PNKP-225ENST00000636214 SLC37A1P57057 533 aa16.53■□□□□ 0.24
PNKP-225ENST00000636214 RPP38P78345 283 aaKnown RBP16.53■□□□□ 0.24
PNKP-225ENST00000636214 EBPQ15125 230 aaKnown RBP16.53■□□□□ 0.24
PNKP-225ENST00000636214 CDSNQ15517 529 aa16.53■□□□□ 0.24
PNKP-225ENST00000636214 ZNF791Q3KP31 576 aaPredicted RBP16.53■□□□□ 0.24
PNKP-225ENST00000636214 GXYLT1Q4G148 440 aa16.53■□□□□ 0.24
PNKP-225ENST00000636214 ZNF585AQ6P3V2 769 aa16.53■□□□□ 0.24
PNKP-225ENST00000636214 MEX3BQ6ZN04 569 aaKnown RBP16.53■□□□□ 0.24
PNKP-225ENST00000636214 TRILQ7L0X0 811 aa16.53■□□□□ 0.24
PNKP-225ENST00000636214 FBXW8Q8N3Y1 598 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms