RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 DUXAA6NLW8 204 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF587BE7ETH6 402 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 CLDN3O15551 220 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 HCRTO43612 131 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 SELENOFO60613 162 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 RNASEH1O60930 286 aaKnown RBP2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 KERAO60938 352 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 FCGR3BO75015 233 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 LUC7L3O95232 432 aaKnown RBP2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 APBB3O95704 486 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 PMS2P2O95744 297 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 PNPP00491 289 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 TFAP2AP05549 437 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 H1F0P07305 194 aaKnown RBP2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 INHBAP08476 426 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 SNRNP70P08621 437 aaKnown RBP2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 ZDHHC11BP0C7U3 371 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 CTAGE8P0CG41 777 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 THEGLP0DJG4 465 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 SPP1P10451 314 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 HAPLN1P10915 354 aaPredicted RBP2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 ODC1P11926 461 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 CEACAM1P13688 526 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF12P17014 697 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 ITIH1P19827 911 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 NMT1P30419 496 aaKnown RBP2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 AHRP35869 848 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 GNL1P36915 607 aaPredicted RBP2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 HSD17B3P37058 310 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 CCT6AP40227 531 aaKnown RBP2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 P2RY2P41231 377 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 FRKP42685 505 aaPredicted RBP2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 MAGEA11P43364 429 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 KCNJ1P48048 391 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 ARCN1P48444 511 aaKnown RBP2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 CLDN15P56746 228 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 OSTNP61366 133 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 ISL1P61371 349 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 NOP14P78316 857 aaKnown RBP2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 SLC7A9P82251 487 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 GTF2BQ00403 316 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 SPAG1Q07617 926 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 SLC20A2Q08357 652 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 AP1B1Q10567 949 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 SMARCB1Q12824 385 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 DLG1Q12959 904 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 PRKAA1Q13131 559 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 RUNX3Q13761 415 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 ENPP2Q13822 863 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 RCN2Q14257 317 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 DMC1Q14565 340 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 MTF1Q14872 753 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 KIR2DS5Q14953 304 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 PDGFRLQ15198 375 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 NPTX1Q15818 432 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 KYAT1Q16773 422 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 IZUMO4Q1ZYL8 232 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 FUT11Q495W5 492 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 SLC39A12Q504Y0 691 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF789Q5FWF6 425 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 LRRC73Q5JTD7 316 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 SPDYCQ5MJ68 293 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 CYP4A22Q5TCH4 519 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 OR7E24Q6IFN5 339 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 FAM171BQ6P995 826 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 PLXDC2Q6UX71 529 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 NHLRC1Q6VVB1 395 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 RAD9BQ6WBX8 426 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 PHLDB2Q86SQ0 1253 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 ITIH5Q86UX2 942 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 SATL1Q86VE3 508 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 NUDT13Q86X67 352 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 TMEM219Q86XT9 240 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 KMT5CQ86Y97 462 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 CREBRFQ8IUR6 639 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 SIAH3Q8IW03 269 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 FAM114A1Q8IWE2 563 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 CD302Q8IX05 232 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 CTAGE4Q8IX94 777 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 ODF3L1Q8IXM7 274 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 CLYBLQ8N0X4 340 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 ARHGAP24Q8N264 748 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 MUC20Q8N307 709 aaPredicted RBP2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 ELMOD1Q8N336 334 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 PDCL2Q8N4E4 241 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 LRRC52Q8N7C0 313 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 TRIML1Q8N9V2 468 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 UXS1Q8NBZ7 420 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 RPLP0P6Q8NHW5 317 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 ERMNQ8TAM6 284 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 SPPL2BQ8TCT7 592 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 CCDC107Q8WV48 283 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 SYN2Q92777 582 aaPredicted RBP2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 CCDC47Q96A33 483 aaKnown RBP2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 CENPTQ96BT3 561 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 DNAJC19Q96DA6 116 aa2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 SNRNP40Q96DI7 357 aaKnown RBP2.28□□□□□ -2.04
SMARCB1-208ENST00000634926 PHF21BQ96EK2 531 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms