RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 APRTP07741 180 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 ZNF883P0CG24 379 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 TRIM49P0CI25 452 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 TRIM49CP0CI26 452 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 GNSP15586 552 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 PTPN4P29074 926 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 MAT2AP31153 395 aaKnown RBP3.35□□□□□ -1.87
CDR1-202ENST00000625883 TRIM23P36406 574 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 CAMLGP49069 296 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 ERVK11-1P61568 191 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 RPS4XP62701 263 aaKnown RBP3.35□□□□□ -1.87
CDR1-202ENST00000625883 CARTPTQ16568 116 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 WDR25Q64LD2 544 aaPredicted RBP3.35□□□□□ -1.87
CDR1-202ENST00000625883 STEAP1BQ6NZ63 245 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 DOK6Q6PKX4 331 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 ISLR2Q6UXK2 745 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 YRDCQ86U90 279 aaKnown RBP3.35□□□□□ -1.87
CDR1-202ENST00000625883 LRRC17Q8N6Y2 441 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 OR1K1Q8NGR3 316 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 OR4F5Q8NH21 305 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 RDH11Q8TC12 318 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 DQX1Q8TE96 717 aaKnown RBP3.35□□□□□ -1.87
CDR1-202ENST00000625883 CHPT1Q8WUD6 406 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 PCNPQ8WW12 178 aaKnown RBP3.35□□□□□ -1.87
CDR1-202ENST00000625883 SLC45A3Q96JT2 553 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 ACCSQ96QU6 501 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 CCDC28BQ9BUN5 200 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 KRT23Q9C075 422 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 GFRA4Q9GZZ7 299 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 HPS4Q9NQG7 708 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 HOMER3Q9NSC5 361 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 CNOT2Q9NZN8 540 aaKnown RBP3.35□□□□□ -1.87
CDR1-202ENST00000625883 ERVK-18Q9QC07 812 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 IL20RAQ9UHF4 553 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 ENTPD4Q9Y227 616 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 SLC6A5Q9Y345 797 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 UBE4BO95155 1302 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 PTPRUQ92729 1446 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 RAD54L2Q9Y4B4 1467 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 TRGV8A0A0C4DH27 118 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 IGLON5A6NGN9 336 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 NTN3O00634 580 aaPredicted RBP3.35□□□□□ -1.87
CDR1-202ENST00000625883 PTBP3O95758 552 aaKnown RBP3.35□□□□□ -1.87
CDR1-202ENST00000625883 PDGFBP01127 241 aaPredicted RBP3.35□□□□□ -1.87
CDR1-202ENST00000625883 PROS1P07225 676 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 HIST1H2AGP0C0S8 130 aaPredicted RBP3.35□□□□□ -1.87
CDR1-202ENST00000625883 MBL2P11226 248 aaPredicted RBP3.35□□□□□ -1.87
CDR1-202ENST00000625883 ZNF10P21506 573 aaPredicted RBP3.35□□□□□ -1.87
CDR1-202ENST00000625883 HSPA1LP34931 641 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 SLC1A6P48664 564 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 NPY2RP49146 381 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 ATP4BP51164 291 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 NDST1P52848 882 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 SRPXP78539 464 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 FASTKQ14296 549 aaKnown RBP3.35□□□□□ -1.87
CDR1-202ENST00000625883 KARSQ15046 597 aaKnown RBP3.35□□□□□ -1.87
CDR1-202ENST00000625883 SIX1Q15475 284 aaPredicted RBP3.35□□□□□ -1.87
CDR1-202ENST00000625883 CLPPQ16740 277 aaPredicted RBP3.35□□□□□ -1.87
CDR1-202ENST00000625883 POM121L1PQ3SYA9 428 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 AGKQ53H12 422 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 MUC21Q5SSG8 566 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 LIPKQ5VXJ0 399 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 RHBDD2Q6NTF9 364 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 FAM159AQ6UWV7 190 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 NUFIP2Q7Z417 695 aaKnown RBP3.35□□□□□ -1.87
CDR1-202ENST00000625883 GPR142Q7Z601 462 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.35□□□□□ -1.87
CDR1-202ENST00000625883 LMNTD2Q8IXW0 634 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 LINC00518Q8N0U6 118 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 COLGALT1Q8NBJ5 622 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 HIST1H2ACQ93077 130 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 ZNF689Q96CS4 500 aaPredicted RBP3.35□□□□□ -1.87
CDR1-202ENST00000625883 DEFB118Q96PH6 123 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 LRRC61Q9BV99 259 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 OCR1Q9BZK8 76 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 EGLN1Q9GZT9 426 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 LIME1Q9H400 295 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 NT5DC2Q9H857 520 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 MOB1AQ9H8S9 216 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 SOHLH2Q9NX45 425 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 CTSZQ9UBR2 303 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 LHX3Q9UBR4 397 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 CLIP2Q9UDT6 1046 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 MIOXQ9UGB7 285 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 HOOK1Q9UJC3 728 aaKnown RBP3.35□□□□□ -1.87
CDR1-202ENST00000625883 ZNF346Q9UL40 294 aaKnown RBP3.35□□□□□ -1.87
CDR1-202ENST00000625883 PLA2G4CQ9UP65 541 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 ATG4BQ9Y4P1 393 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 CLCA3PQ9Y6N3 262 aa3.35□□□□□ -1.87
CDR1-202ENST00000625883 SALL1Q9NSC2 1324 aa3.34□□□□□ -1.87
CDR1-202ENST00000625883 ASB14A6NK59 587 aa3.34□□□□□ -1.88
CDR1-202ENST00000625883 DUSP11O75319 330 aaKnown RBP3.34□□□□□ -1.88
CDR1-202ENST00000625883 CCDC159P0C7I6 412 aa3.34□□□□□ -1.88
CDR1-202ENST00000625883 RNF224P0DH78 156 aa3.34□□□□□ -1.88
CDR1-202ENST00000625883 FOSL2P15408 326 aa3.34□□□□□ -1.88
CDR1-202ENST00000625883 ETV5P41161 510 aa3.34□□□□□ -1.88
CDR1-202ENST00000625883 SLC6A8P48029 635 aa3.34□□□□□ -1.88
CDR1-202ENST00000625883 ZNF131P52739 623 aa3.34□□□□□ -1.88
CDR1-202ENST00000625883 CDKL1Q00532 357 aa3.34□□□□□ -1.88
CDR1-202ENST00000625883 FUT7Q11130 342 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms