RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 JPH3Q8WXH2 748 aaPredicted RBP11.33□□□□□ -0.6
TP53-227ENST00000622645 ITFG2Q969R8 447 aa11.33□□□□□ -0.6
TP53-227ENST00000622645 ZNF354BQ96LW1 612 aa11.33□□□□□ -0.6
TP53-227ENST00000622645 OR5M11Q96RB7 305 aa11.33□□□□□ -0.6
TP53-227ENST00000622645 RPP25Q9BUL9 199 aaKnown RBP11.33□□□□□ -0.6
TP53-227ENST00000622645 MKRN2Q9H000 416 aaKnown RBP11.33□□□□□ -0.6
TP53-227ENST00000622645 OR51E2Q9H255 320 aa11.33□□□□□ -0.6
TP53-227ENST00000622645 PHPT1Q9NRX4 125 aaPredicted RBP11.33□□□□□ -0.6
TP53-227ENST00000622645 ACSS1Q9NUB1 689 aaPredicted RBP11.33□□□□□ -0.6
TP53-227ENST00000622645 OBP2AQ9NY56 170 aa11.33□□□□□ -0.6
TP53-227ENST00000622645 DAPK2Q9UIK4 370 aa11.33□□□□□ -0.6
TP53-227ENST00000622645 GPSM3Q9Y4H4 160 aa11.33□□□□□ -0.6
TP53-227ENST00000622645 ALPK3Q96L96 1907 aa11.33□□□□□ -0.6
TP53-227ENST00000622645 A0A1W2PS29 197 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 M0R3H8 397 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 PGRMC2O15173 223 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 ERI3O43414 337 aaKnown RBP11.32□□□□□ -0.6
TP53-227ENST00000622645 IMPDH2P12268 514 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 C5AR1P21730 350 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 NCBP2P52298 156 aaKnown RBP eCLIP11.32□□□□□ -0.6
TP53-227ENST00000622645 RAB15P59190 212 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 DMPKQ09013 629 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 SGCGQ13326 291 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 DOC2BQ14184 412 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 DCST1Q5T197 706 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 LINC00299Q6ZSB3 139 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 WDR53Q7Z5U6 358 aaPredicted RBP11.32□□□□□ -0.6
TP53-227ENST00000622645 FBXL6Q8N531 539 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 OR14C36Q8NHC7 312 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 MCFD2Q8NI22 146 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 FAM210AQ96ND0 272 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 BTBD1Q9H0C5 482 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 SYNPO2LQ9H987 977 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 SLC35C2Q9NQQ7 365 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 SEMA3GQ9NS98 782 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 REV1Q9UBZ9 1251 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 ADAM29Q9UKF5 820 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 MYO10Q9HD67 2058 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 ARRDC5A6NEK1 342 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 PDE9AO76083 593 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 APODP05090 189 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 H1F0P07305 194 aaKnown RBP11.32□□□□□ -0.6
TP53-227ENST00000622645 C8orf89P0DMQ9 161 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 NR2F1P10589 423 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 DBTP11182 482 aaKnown RBP11.32□□□□□ -0.6
TP53-227ENST00000622645 CD97P48960 835 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 RGS6P49758 472 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 RELAQ04206 551 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 HYAL2Q12891 473 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 SLAMF1Q13291 335 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 COL9A2Q14055 689 aaPredicted RBP11.32□□□□□ -0.6
TP53-227ENST00000622645 UAP1L1Q3KQV9 507 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 C9orf50Q5SZB4 431 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 RBM12BQ8IXT5 1001 aaKnown RBP11.32□□□□□ -0.6
TP53-227ENST00000622645 TMEM145Q8NBT3 493 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 PSMA8Q8TAA3 256 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 SLC7A13Q8TCU3 470 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 SLC35G5Q96KT7 338 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 ZNF607Q96SK3 696 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 UCK2Q9BZX2 261 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 PITHD1Q9GZP4 211 aaPredicted RBP11.32□□□□□ -0.6
TP53-227ENST00000622645 DSN1Q9H410 356 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 MVB12BQ9H7P6 319 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 SLC6A20Q9NP91 592 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 MRPS30Q9NP92 439 aaKnown RBP11.32□□□□□ -0.6
TP53-227ENST00000622645 FBXL12Q9NXK8 326 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 SPHK1Q9NYA1 384 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 TAS2R7Q9NYW3 318 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.32□□□□□ -0.6
TP53-227ENST00000622645 ATG4BQ9Y4P1 393 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 CKAP5Q14008 2032 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 DSPPQ9NZW4 1301 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 A0A1W2PQU0 124 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 A0A1W2PR48 441 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 GPR89AB7ZAQ6 455 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 H3BN98 237 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 MAN2B1O00754 1011 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 HAT1O14929 419 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 ZW10O43264 779 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 ENTPD6O75354 484 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 ADAP00813 363 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 GPR89BP0CG08 455 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 GDI1P31150 447 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 BCAP31P51572 246 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 LSM11P83369 360 aaKnown RBP eCLIP11.32□□□□□ -0.6
TP53-227ENST00000622645 TEKQ02763 1124 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 DUSP2Q05923 314 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 IRF3Q14653 427 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 SLC9A5Q14940 896 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 OXA1LQ15070 435 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 AGERQ15109 404 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 MED22Q15528 200 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 CCDC116Q8IYX3 515 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 CACTIN-AS1Q8N1I8 211 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 FAM46DQ8NEK8 389 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 MS4A6EQ96DS6 147 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 CHCHD6Q9BRQ6 235 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 CENPOQ9BU64 300 aa11.32□□□□□ -0.6
TP53-227ENST00000622645 MTIF3Q9H2K0 278 aaKnown RBP11.32□□□□□ -0.6
TP53-227ENST00000622645 CTPS2Q9NRF8 586 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms