RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 TAF4O00268 1085 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 DSCR3O14972 297 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 SERPINB7O75635 380 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 PCDH8O95206 1070 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 H1F0P07305 194 aaKnown RBP8.92□□□□□ -0.98
PDPN-212ENST00000621990 CD72P21854 359 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 SMIM11AP58511 58 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 ALDH6A1Q02252 535 aaKnown RBP8.92□□□□□ -0.98
PDPN-212ENST00000621990 GPM6BQ13491 265 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 SPDYE7PQ495Y7 208 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 ARMCX4Q5H9R4 360 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 MRM1Q6IN84 353 aaKnown RBP8.92□□□□□ -0.98
PDPN-212ENST00000621990 PGBD2Q6P3X8 592 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 PTCHD4Q6ZW05 846 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 ATCAYQ86WG3 371 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 LACC1Q8IV20 430 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 NLGN4XQ8N0W4 816 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 SFXN5Q8TD22 340 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 UCN3Q969E3 161 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 C12orf66Q96MD2 445 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 FERD3LQ96RJ6 166 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 WFDC6Q9BQY6 131 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 C1QTNF2Q9BXJ5 285 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 SLC35C2Q9NQQ7 365 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 DAPK2Q9UIK4 370 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 A4GNTQ9UNA3 340 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 ZW10O43264 779 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 TP53P04637 393 aaPredicted RBP8.92□□□□□ -0.98
PDPN-212ENST00000621990 CEACAM5P06731 702 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 ALOX5P09917 674 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 ACP5P13686 325 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 CDH3P22223 829 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 BCL6P41182 706 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 SLC25A30Q5SVS4 291 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 DCST1Q5T197 706 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 MEDAGQ5VYS4 303 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 GET4Q7L5D6 327 aaPredicted RBP8.92□□□□□ -0.98
PDPN-212ENST00000621990 COMTD1Q86VU5 262 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 ST13P5Q8NFI4 369 aaPredicted RBP8.92□□□□□ -0.98
PDPN-212ENST00000621990 KBTBD8Q8NFY9 601 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 C17orf62Q9BQA9 187 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 FAIM2Q9BWQ8 316 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 OR51I1Q9H343 314 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 PHPT1Q9NRX4 125 aaPredicted RBP8.92□□□□□ -0.98
PDPN-212ENST00000621990 PNMA8BQ9ULN7 279 aaPredicted RBP8.92□□□□□ -0.98
PDPN-212ENST00000621990 LSM2Q9Y333 95 aaKnown RBP8.92□□□□□ -0.98
PDPN-212ENST00000621990 ASB4Q9Y574 426 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 DOCK8Q8NF50 2099 aa8.92□□□□□ -0.98
PDPN-212ENST00000621990 AGAP5A6NIR3 686 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 C4orf51C9J302 202 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 TLR4O00206 839 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 PPM1DO15297 605 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 SLC28A2O43868 658 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 CNOT3O75175 753 aaKnown RBP8.91□□□□□ -0.98
PDPN-212ENST00000621990 AHRP35869 848 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 SSR2P43308 183 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 TSFMP43897 325 aaKnown RBP8.91□□□□□ -0.98
PDPN-212ENST00000621990 CRISP3P54108 245 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 ERVK-21P61565 698 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 ABATP80404 500 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 TP53BP2Q13625 1128 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 SYPL1Q16563 259 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 LEXMQ3ZCV2 418 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 PRAMEF8Q5VWM4 474 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 PRAMEF7Q5VXH5 474 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 PLEKHG7Q6ZR37 379 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 RBM45Q8IUH3 476 aaKnown RBP8.91□□□□□ -0.98
PDPN-212ENST00000621990 AMER2Q8N7J2 671 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 BBS10Q8TAM1 723 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 RNF217Q8TC41 542 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 SLC7A13Q8TCU3 470 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 MS4A6EQ96DS6 147 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 ERLEC1Q96DZ1 483 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 SCARF2Q96GP6 870 aaPredicted RBP8.91□□□□□ -0.98
PDPN-212ENST00000621990 SLC35G5Q96KT7 338 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 Q96MT0 163 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 CDADC1Q9BWV3 514 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 MVB12BQ9H7P6 319 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 SLC6A20Q9NP91 592 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 PRDM7Q9NQW5 492 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 SEMA3GQ9NS98 782 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 SEC14L3Q9UDX4 400 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 UGT2A1Q9Y4X1 527 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 ISPDA4D126 451 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 KRBA1A5PL33 1030 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 TMEM247A6NEH6 219 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 BOLA2-SMG1P6H3BVE0 249 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 EPPINO95925 133 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 CA3P07451 260 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 OR12D1P0DN82 309 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 ENDOUP21128 410 aaKnown RBP8.91□□□□□ -0.98
PDPN-212ENST00000621990 HIST1H1TP22492 207 aaPredicted RBP8.91□□□□□ -0.98
PDPN-212ENST00000621990 KHKP50053 298 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 UGT2B15P54855 530 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 RPS21P63220 83 aaKnown RBP8.91□□□□□ -0.98
PDPN-212ENST00000621990 RHAGQ02094 409 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 FUT5Q11128 374 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 DOC2BQ14184 412 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 CEBPEQ15744 281 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 OCLNQ16625 522 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms