RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 RBM12BQ8IXT5 1001 aaKnown RBP8.8□□□□□ -1
GGA3-223ENST00000621870 SLC15A3Q8IY34 581 aa8.8□□□□□ -1
GGA3-223ENST00000621870 TCEANCQ8N8B7 351 aa8.8□□□□□ -1
GGA3-223ENST00000621870 CREB3L4Q8TEY5 395 aa8.8□□□□□ -1
GGA3-223ENST00000621870 MAL2Q969L2 176 aa8.8□□□□□ -1
GGA3-223ENST00000621870 TMEM203Q969S6 136 aa8.8□□□□□ -1
GGA3-223ENST00000621870 EGLN2Q96KS0 407 aa8.8□□□□□ -1
GGA3-223ENST00000621870 PKP2Q99959 881 aa8.8□□□□□ -1
GGA3-223ENST00000621870 DUX4Q9UBX2 424 aa8.8□□□□□ -1
GGA3-223ENST00000621870 RSL24D1Q9UHA3 163 aaKnown RBP8.8□□□□□ -1
GGA3-223ENST00000621870 PCDHB14Q9Y5E9 798 aa8.8□□□□□ -1
GGA3-223ENST00000621870 LAMA4Q16363 1823 aa8.8□□□□□ -1
GGA3-223ENST00000621870 TCRBV5S1A1TA0A578 114 aa8.8□□□□□ -1
GGA3-223ENST00000621870 LDOC1O95751 146 aaPredicted RBP8.8□□□□□ -1
GGA3-223ENST00000621870 NR2C1P13056 603 aa8.8□□□□□ -1
GGA3-223ENST00000621870 EIF2DP41214 584 aaKnown RBP8.8□□□□□ -1
GGA3-223ENST00000621870 CDH11P55287 796 aa8.8□□□□□ -1
GGA3-223ENST00000621870 RIN1Q13671 783 aa8.8□□□□□ -1
GGA3-223ENST00000621870 ARHGAP19Q14CB8 494 aa8.8□□□□□ -1
GGA3-223ENST00000621870 TAB1Q15750 504 aa8.8□□□□□ -1
GGA3-223ENST00000621870 TSSK4Q6SA08 328 aa8.8□□□□□ -1
GGA3-223ENST00000621870 Q7L0L9 218 aa8.8□□□□□ -1
GGA3-223ENST00000621870 SLC44A3Q8N4M1 653 aa8.8□□□□□ -1
GGA3-223ENST00000621870 OR2L5Q8NG80 312 aa8.8□□□□□ -1
GGA3-223ENST00000621870 OR5T3Q8NGG3 340 aa8.8□□□□□ -1
GGA3-223ENST00000621870 OR9A4Q8NGU2 314 aa8.8□□□□□ -1
GGA3-223ENST00000621870 LGR4Q9BXB1 951 aa8.8□□□□□ -1
GGA3-223ENST00000621870 POLDIP3Q9BY77 421 aaKnown RBP8.8□□□□□ -1
GGA3-223ENST00000621870 SMURF2Q9HAU4 748 aa8.8□□□□□ -1
GGA3-223ENST00000621870 FGF21Q9NSA1 209 aa8.8□□□□□ -1
GGA3-223ENST00000621870 POT1Q9NUX5 634 aa8.8□□□□□ -1
GGA3-223ENST00000621870 TNFRSF10DQ9UBN6 386 aa8.8□□□□□ -1
GGA3-223ENST00000621870 POFUT2Q9Y2G5 429 aa8.8□□□□□ -1
GGA3-223ENST00000621870 DOPEY2Q9Y3R5 2298 aa8.8□□□□□ -1
GGA3-223ENST00000621870 SPTBN1Q01082 2364 aaKnown RBP8.8□□□□□ -1
GGA3-223ENST00000621870 EFCAB9A8MZ26 197 aa8.79□□□□□ -1
GGA3-223ENST00000621870 ANHXE9PGG2 379 aa8.79□□□□□ -1
GGA3-223ENST00000621870 H0YC42 278 aa8.79□□□□□ -1
GGA3-223ENST00000621870 AIREO43918 545 aa8.79□□□□□ -1
GGA3-223ENST00000621870 LHCGRP22888 699 aa8.79□□□□□ -1
GGA3-223ENST00000621870 GSTT1P30711 240 aa8.79□□□□□ -1
GGA3-223ENST00000621870 RBBP4Q09028 425 aa8.79□□□□□ -1
GGA3-223ENST00000621870 BLOC1S3Q6QNY0 202 aa8.79□□□□□ -1
GGA3-223ENST00000621870 GALNTL5Q7Z4T8 443 aa8.79□□□□□ -1
GGA3-223ENST00000621870 ARHGAP22Q7Z5H3 698 aa8.79□□□□□ -1
GGA3-223ENST00000621870 SLCO6A1Q86UG4 719 aa8.79□□□□□ -1
GGA3-223ENST00000621870 TEX26Q8N6G2 289 aa8.79□□□□□ -1
GGA3-223ENST00000621870 ZNF740Q8NDX6 193 aa8.79□□□□□ -1
GGA3-223ENST00000621870 DCBLD2Q96PD2 775 aa8.79□□□□□ -1
GGA3-223ENST00000621870 WDR77Q9BQA1 342 aaPredicted RBP8.79□□□□□ -1
GGA3-223ENST00000621870 ZNF717Q9BY31 904 aaPredicted RBP8.79□□□□□ -1
GGA3-223ENST00000621870 MKRN2Q9H000 416 aaKnown RBP8.79□□□□□ -1
GGA3-223ENST00000621870 GSTO2Q9H4Y5 243 aa8.79□□□□□ -1
GGA3-223ENST00000621870 TM7SF3Q9NS93 570 aa8.79□□□□□ -1
GGA3-223ENST00000621870 RAB26Q9ULW5 256 aa8.79□□□□□ -1
GGA3-223ENST00000621870 ERVK-19Q9WJR5 959 aa8.79□□□□□ -1
GGA3-223ENST00000621870 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.79□□□□□ -1
GGA3-223ENST00000621870 C17orf105B2RV13 164 aa8.79□□□□□ -1
GGA3-223ENST00000621870 C2CD4DB7Z1M9 353 aa8.79□□□□□ -1
GGA3-223ENST00000621870 TFECO14948 347 aaPredicted RBP8.79□□□□□ -1
GGA3-223ENST00000621870 FARS2O95363 451 aaKnown RBP8.79□□□□□ -1
GGA3-223ENST00000621870 NPPAP01160 153 aa8.79□□□□□ -1
GGA3-223ENST00000621870 RLN1P04808 185 aa8.79□□□□□ -1
GGA3-223ENST00000621870 PEPDP12955 493 aa8.79□□□□□ -1
GGA3-223ENST00000621870 C4BPBP20851 252 aa8.79□□□□□ -1
GGA3-223ENST00000621870 FOLR3P41439 243 aa8.79□□□□□ -1
GGA3-223ENST00000621870 MC3RP41968 323 aa8.79□□□□□ -1
GGA3-223ENST00000621870 MLLT10P55197 1068 aa8.79□□□□□ -1
GGA3-223ENST00000621870 CASP6P55212 293 aa8.79□□□□□ -1
GGA3-223ENST00000621870 CTBP2P56545 445 aa8.79□□□□□ -1
GGA3-223ENST00000621870 TXNL4AP83876 142 aaKnown RBP8.79□□□□□ -1
GGA3-223ENST00000621870 SRYQ05066 204 aa8.79□□□□□ -1
GGA3-223ENST00000621870 TMEM44Q2T9K0 475 aa8.79□□□□□ -1
GGA3-223ENST00000621870 HSF5Q4G112 596 aaPredicted RBP8.79□□□□□ -1
GGA3-223ENST00000621870 TPRG1LQ5T0D9 272 aa8.79□□□□□ -1
GGA3-223ENST00000621870 MZT2BQ6NZ67 158 aa8.79□□□□□ -1
GGA3-223ENST00000621870 LCTLQ6UWM7 567 aa8.79□□□□□ -1
GGA3-223ENST00000621870 VWA5B2Q8N398 1253 aa8.79□□□□□ -1
GGA3-223ENST00000621870 OR6C4Q8NGE1 309 aa8.79□□□□□ -1
GGA3-223ENST00000621870 BBS10Q8TAM1 723 aa8.79□□□□□ -1
GGA3-223ENST00000621870 PDXPQ96GD0 296 aa8.79□□□□□ -1
GGA3-223ENST00000621870 TMEM185BQ9H7F4 350 aa8.79□□□□□ -1
GGA3-223ENST00000621870 CXorf21Q9HAI6 301 aa8.79□□□□□ -1
GGA3-223ENST00000621870 PELI2Q9HAT8 420 aa8.79□□□□□ -1
GGA3-223ENST00000621870 PALMDQ9NP74 551 aa8.79□□□□□ -1
GGA3-223ENST00000621870 GRHPRQ9UBQ7 328 aa8.79□□□□□ -1
GGA3-223ENST00000621870 NAALAD2Q9Y3Q0 740 aa8.79□□□□□ -1
GGA3-223ENST00000621870 NME7Q9Y5B8 376 aa8.79□□□□□ -1
GGA3-223ENST00000621870 DOCK3Q8IZD9 2030 aa8.79□□□□□ -1
GGA3-223ENST00000621870 CDK5RAP2Q96SN8 1893 aa8.79□□□□□ -1
GGA3-223ENST00000621870 MYO5AQ9Y4I1 1855 aaKnown RBP8.79□□□□□ -1
GGA3-223ENST00000621870 CASP8AP2Q9UKL3 1982 aa8.79□□□□□ -1
GGA3-223ENST00000621870 SOBPA7XYQ1 873 aa8.79□□□□□ -1
GGA3-223ENST00000621870 NPIPA2E9PIF3 369 aa8.79□□□□□ -1
GGA3-223ENST00000621870 NPIPA3F8WFD2 350 aa8.79□□□□□ -1
GGA3-223ENST00000621870 PLOD3O60568 738 aa8.79□□□□□ -1
GGA3-223ENST00000621870 GABBR2O75899 941 aa8.79□□□□□ -1
GGA3-223ENST00000621870 CLIC3O95833 236 aa8.79□□□□□ -1
GGA3-223ENST00000621870 NDUFV2P19404 249 aa8.79□□□□□ -1
GGA3-223ENST00000621870 GBX2P52951 348 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms