RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 STK25O00506 426 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 ZNF780AO75290 641 aaPredicted RBP18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 CCNYL3P0C7X3 344 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 SELPP16109 830 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 ZNF30P17039 623 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 ALAS2P22557 587 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 HLA-FP30511 346 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 HTR2BP41595 481 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 MAP2K3P46734 347 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 GAS1P54826 345 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 TSTA3Q13630 321 aaPredicted RBP18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 TATDN3Q17R31 274 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 PLK5Q496M5 336 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 HENMT1Q5T8I9 393 aaKnown RBP18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 SYCE2Q6PIF2 218 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 ZNF730Q6ZMV8 503 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 Q6ZVU0 165 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 HTR3DQ70Z44 454 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 GLCCI1Q86VQ1 547 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 SLC7A13Q8TCU3 470 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 NEURL3Q96EH8 262 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 SORBS1Q9BX66 1292 aaKnown RBP18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 MVB12BQ9H7P6 319 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 ACAD8Q9UKU7 415 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 ICKQ9UPZ9 632 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 ALG5Q9Y673 324 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 PRRG1O14668 218 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 ATG13O75143 517 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 APEX1P27695 318 aaKnown RBP18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 VIPR1P32241 457 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 PRLHRP49683 370 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 ALDH6A1Q02252 535 aaKnown RBP18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 FAM214AQ32MH5 1076 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 SLC25A30Q5SVS4 291 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 TIGD3Q6B0B8 471 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 PDZD3Q86UT5 571 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 LAPTM4BQ86VI4 370 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 CMTM8Q8IZV2 173 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 TRAM1L1Q8N609 369 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 TM9SF4Q92544 642 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 FGF11Q92914 225 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 TIFAQ96CG3 184 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 ZNF582Q96NG8 517 aaPredicted RBP18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 TEFMQ96QE5 360 aaKnown RBP18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 SLAMF7Q9NQ25 335 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 DYRK1BQ9Y463 629 aa18.57■□□□□ 0.56
PDLIM3-212ENST00000620787 QSOX1O00391 747 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 HOXA2O43364 376 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 PBLDP30039 288 aaPredicted RBP18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 MAN2A2P49641 1150 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 GZMKP49863 264 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 P2RX3P56373 397 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 WNT4P56705 351 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 OR2G6Q5TZ20 316 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 PLET1Q6UQ28 207 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 GDPD4Q6W3E5 623 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 QSOX2Q6ZRP7 698 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 OR52P1PQ8NH57 321 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 ZC3HAV1LQ96H79 300 aaKnown RBP18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 FOPNLQ96NB1 174 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 SOSTQ9BQB4 213 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 MIEF1Q9NQG6 463 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 SEMA3GQ9NS98 782 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 ZSCAN32Q9NX65 697 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 HCN1O60741 890 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 C1orf105O95561 183 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 DDX5P17844 614 aaKnown RBP18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 CAV3P56539 151 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 POLR2LP62875 67 aaKnown RBP18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 TNK1Q13470 666 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 C3orf38Q5JPI3 329 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 IKBIPQ70UQ0 350 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 ABI3BPQ7Z7G0 1075 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 LRR1Q96L50 414 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 ZNF354BQ96LW1 612 aa18.56■□□□□ 0.56
PDLIM3-212ENST00000620787 KIAA1549LQ6ZVL6 1849 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 TMEM88BA6NKF7 163 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 TRIM3O75382 744 aaPredicted RBP18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 URODP06132 367 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 FAM157BP0CG42 384 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 KCNJ5P48544 419 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 ACSM5Q6NUN0 579 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 PLCZ1Q86YW0 608 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 ZNF740Q8NDX6 193 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 AP3S1Q92572 193 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 RAB8BQ92930 207 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 C1GALT1C1Q96EU7 318 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 ZBED6CLQ96FA7 236 aaPredicted RBP18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 IGSF21Q96ID5 467 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 SGPP1Q9BX95 441 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 PPP1R3EQ9H7J1 279 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 GIMAP4Q9NUV9 329 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 DKK3Q9UBP4 350 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 CXorf51AA0A1B0GTR3 108 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 CYP2A6P11509 494 aaPredicted RBP18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 IL12RB1P42701 662 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 TPBGQ13641 420 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 GINS1Q14691 196 aa18.55■□□□□ 0.56
PDLIM3-212ENST00000620787 CRTC2Q53ET0 693 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms