RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 CASTOR2A6NHX0 329 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 H3BUI4 141 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 INSIG1O15503 277 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 HRO43593 1189 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 SH3BP5O60239 455 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 NAT2P11245 290 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 RHCEP18577 417 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 ATF6P18850 670 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 KELP23276 732 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 ACVRL1P37023 503 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 BDKRB1P46663 353 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 HTRA4P83105 476 aaPredicted RBP10.29□□□□□ -0.76
UPF3A-212ENST00000619079 UBE3AQ05086 875 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 ZNF33BQ06732 778 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 ILKQ13418 452 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 TPBGQ13641 420 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 ARHGEF7Q14155 803 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 HEPACAMQ14CZ8 416 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 RAB30Q15771 203 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 BCL2L15Q5TBC7 163 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 C12orf73Q69YU5 71 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 CLECL1Q8IZS7 167 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 TTC16Q8NEE8 873 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 OR7D4Q8NG98 312 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 MAL2Q969L2 176 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 TMEM203Q969S6 136 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 FBXW5Q969U6 566 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 KLHL15Q96M94 604 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 RPRD1AQ96P16 312 aaPredicted RBP10.29□□□□□ -0.76
UPF3A-212ENST00000619079 RBP7Q96R05 134 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 DUSP26Q9BV47 211 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 HDHD2Q9H0R4 259 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 PRO3102Q9H379 93 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 NMNAT1Q9HAN9 279 aaPredicted RBP10.29□□□□□ -0.76
UPF3A-212ENST00000619079 C11orf16Q9NQ32 467 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 IFT46Q9NQC8 304 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 MED9Q9NWA0 146 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 HCSTQ9UBK5 93 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 FNDC3AQ9Y2H6 1198 aaKnown RBP10.29□□□□□ -0.76
UPF3A-212ENST00000619079 ENPP4Q9Y6X5 453 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 GLYATL1P3A0A0U1RQE8 302 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 A0A1W2PPC1 479 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 AGRPO00253 132 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 KPNA5O15131 536 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 PRKYO43930 277 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 GCM2O75603 506 aaPredicted RBP10.29□□□□□ -0.76
UPF3A-212ENST00000619079 LALBAP00709 142 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 GASTP01350 101 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 PEPDP12955 493 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 RPL9P32969 192 aaKnown RBP10.29□□□□□ -0.76
UPF3A-212ENST00000619079 OR1E2P47887 323 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 OR1G1P47890 313 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 GPR176Q14439 515 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 CCDC85BQ15834 202 aaPredicted RBP10.29□□□□□ -0.76
UPF3A-212ENST00000619079 LEXMQ3ZCV2 418 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 SPIN4Q56A73 249 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 BMP8AQ7Z5Y6 402 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 MON1AQ86VX9 555 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 ZNF280BQ86YH2 543 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 RASGRP3Q8IV61 690 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 PM20D2Q8IYS1 436 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 OR11H7Q8NGC8 314 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 ACOT12Q8WYK0 555 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 TM9SF4Q92544 642 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 IGSF8Q969P0 613 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 ZNF689Q96CS4 500 aaPredicted RBP10.29□□□□□ -0.76
UPF3A-212ENST00000619079 MYO19Q96H55 970 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 ERMAPQ96PL5 475 aaPredicted RBP10.29□□□□□ -0.76
UPF3A-212ENST00000619079 DPYSL5Q9BPU6 564 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 SHARPINQ9H0F6 387 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 OR51J1Q9H342 316 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 LDAHQ9H6V9 325 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 NMUR1Q9HB89 426 aa10.29□□□□□ -0.76
UPF3A-212ENST00000619079 KCNE1BA0A087WTH5 132 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 TMEM129A0AVI4 362 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 PCP4L1A6NKN8 68 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 M0R233 179 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 TNFRSF10BO14763 440 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 CASC3O15234 703 aaKnown RBP10.28□□□□□ -0.76
UPF3A-212ENST00000619079 SMAD6O43541 496 aaKnown RBP10.28□□□□□ -0.76
UPF3A-212ENST00000619079 PI15O43692 258 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 TRBC1P01850 177 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 OPN1SWP03999 348 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 ACSM4P0C7M7 580 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 TNFRSF1BP20333 461 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 EPHA5P54756 1037 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 EPHA4P54764 986 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 PUDPQ08623 228 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 MADCAM1Q13477 382 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 DUSP6Q16828 381 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 ATAT1Q5SQI0 421 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 GCNT6Q5T4J0 391 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 CD200R1LQ6Q8B3 271 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 TFAP2EQ6VUC0 442 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 OVCH2Q7RTZ1 564 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 NPAS3Q8IXF0 933 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 ZBTB2Q8N680 514 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 L3MBTL4Q8NA19 623 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 OR11H4Q8NGC9 324 aa10.28□□□□□ -0.76
UPF3A-212ENST00000619079 CHFRQ96EP1 664 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms