RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 FAM83FQ8NEG4 500 aaPredicted RBP4.15□□□□□ -1.75
SNCA-213ENST00000618500 TANKQ92844 425 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 ANKRD9Q96BM1 317 aaPredicted RBP4.15□□□□□ -1.75
SNCA-213ENST00000618500 TACO1Q9BSH4 297 aaKnown RBP4.15□□□□□ -1.75
SNCA-213ENST00000618500 HDHD5Q9BXW7 423 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 RBCK1Q9BYM8 510 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 SHARPINQ9H0F6 387 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 RNF122Q9H9V4 155 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 GP6Q9HCN6 339 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 PLSCR4Q9NRQ2 329 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 PNO1Q9NRX1 252 aaKnown RBP4.15□□□□□ -1.75
SNCA-213ENST00000618500 MS4A12Q9NXJ0 267 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 CIDEBQ9UHD4 219 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 CLCA3PQ9Y6N3 262 aa4.15□□□□□ -1.75
SNCA-213ENST00000618500 CMYA5Q8N3K9 4069 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 LRIT2A6NDA9 550 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 OR2W5A6NFC9 320 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 MIF4GDA9UHW6 222 aaKnown RBP4.14□□□□□ -1.75
SNCA-213ENST00000618500 H7C417 338 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 WWP2O00308 870 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 ACOX3O15254 700 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 OR1F1O43749 312 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 TNFRSF21O75509 655 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 CDC123O75794 336 aaPredicted RBP4.14□□□□□ -1.75
SNCA-213ENST00000618500 MLNP12872 115 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 SLCO1A2P46721 670 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 RGS4P49798 205 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 HNMTP50135 292 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 TPM4P67936 248 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 FOXF2Q12947 444 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 CTBP1Q13363 440 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 VEZF1Q14119 521 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 GANABQ14697 944 aaKnown RBP4.14□□□□□ -1.75
SNCA-213ENST00000618500 EBPQ15125 230 aaKnown RBP4.14□□□□□ -1.75
SNCA-213ENST00000618500 RPS6KA2Q15349 733 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 OXLD1Q5BKU9 147 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 DCST1Q5T197 706 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 NCMAPQ5T1S8 102 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 C11orf71Q6IPW1 123 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 AAGABQ6PD74 315 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 ZNF474Q6S9Z5 364 aaPredicted RBP4.14□□□□□ -1.75
SNCA-213ENST00000618500 MICALCLQ6ZW33 695 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 CENPUQ71F23 418 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 PLD3Q8IV08 490 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 CCDC50Q8IVM0 306 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 METTL25Q8N6Q8 603 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 PPFIBP2Q8ND30 876 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 LILRB1Q8NHL6 650 aaPredicted RBP4.14□□□□□ -1.75
SNCA-213ENST00000618500 CALML6Q8TD86 181 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 RHBDF1Q96CC6 855 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 OR4K3Q96R72 315 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 TNFRSF13CQ96RJ3 184 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 OCSTAMPQ9BR26 566 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 TBCDQ9BTW9 1192 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 C6orf203Q9P0P8 240 aaPredicted RBP4.14□□□□□ -1.75
SNCA-213ENST00000618500 FBXO9Q9UK97 447 aaPredicted RBP4.14□□□□□ -1.75
SNCA-213ENST00000618500 GOLGA6L9A6NEM1 432 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 ZNF860A6NHJ4 632 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 C17orf105B2RV13 164 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 E5RI56 91 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 CBR3O75828 277 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 AIFM1O95831 613 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 IGHV4-39P01824 125 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 PEPDP12955 493 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 PSMB1P20618 241 aaKnown RBP4.14□□□□□ -1.75
SNCA-213ENST00000618500 TYK2P29597 1187 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 FMO4P31512 558 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 PIGAP37287 484 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 PTGDSP41222 190 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 KIR2DL2P43627 348 aaPredicted RBP4.14□□□□□ -1.75
SNCA-213ENST00000618500 MMP16P51512 607 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 CASP9P55211 416 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 SLC37A1P57057 533 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 SCGB2A2Q13296 93 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 LAPTM5Q13571 262 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 FRG1Q14331 258 aaKnown RBP4.14□□□□□ -1.75
SNCA-213ENST00000618500 TBCCQ15814 346 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 LINC01559Q495D7 138 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 THEMIS2Q5TEJ8 643 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 ZNF549Q6P9A3 640 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 ABHD17CQ6PCB6 329 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 SLC29A4Q7RTT9 530 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 CNTN4Q8IWV2 1026 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 ZCCHC7Q8N3Z6 543 aaKnown RBP4.14□□□□□ -1.75
SNCA-213ENST00000618500 TMEM52Q8NDY8 209 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 SKA2Q8WVK7 121 aaPredicted RBP4.14□□□□□ -1.75
SNCA-213ENST00000618500 ADAD1Q96M93 576 aaKnown RBP4.14□□□□□ -1.75
SNCA-213ENST00000618500 ZNF778Q96MU6 729 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 ETNK1Q9HBU6 452 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 ABHD10Q9NUJ1 306 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 DYRK1BQ9Y463 629 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 SPACA6W5XKT8 324 aa4.14□□□□□ -1.75
SNCA-213ENST00000618500 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.13□□□□□ -1.75
SNCA-213ENST00000618500 KRT87PA6NCN2 255 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 TCF21O43680 179 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 LIASO43766 372 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 FTCDO95954 541 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 MBD3O95983 291 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 IFI6P09912 130 aa4.13□□□□□ -1.75
SNCA-213ENST00000618500 SRD5A1P18405 259 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms