RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 NXNL1Q96CM4 212 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 TM4SF19Q96DZ7 209 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 C20orf173Q96LM9 149 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 JMJD8Q96S16 334 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 NDST4Q9H3R1 872 aa6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 ACSS1Q9NUB1 689 aaPredicted RBP6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.1□□□□□ -1.43
SCAMP1-206ENST00000618166 HCRTR2O43614 444 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 LCMT2O60294 686 aaKnown RBP6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 ACTL6AO96019 429 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 EPOP01588 193 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 CSF3P09919 207 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 APEX1P27695 318 aaKnown RBP6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 PDLIM4P50479 330 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 EFNA4P52798 201 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 PNLIPRP1P54315 467 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 CDH15P55291 814 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 LOXL3P58215 753 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 POLR2FP61218 127 aaKnown RBP6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 PLOD1Q02809 727 aaPredicted RBP6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 MSLNQ13421 630 aaPredicted RBP6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 TEX44Q53QW1 395 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 HSP90AA4PQ58FG1 418 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 PIGGQ5H8A4 983 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 AGAP6Q5VW22 663 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 NXPE4Q6UWF7 544 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 P4HA3Q7Z4N8 544 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 CLNKQ7Z7G1 428 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 AFAP1L2Q8N4X5 818 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 PLD5Q8N7P1 536 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 GABPB2Q8TAK5 448 aaPredicted RBP6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 SKA2Q8WVK7 121 aaPredicted RBP6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 C22orf15Q8WYQ4 148 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 UBE2FQ969M7 185 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 S100PBPQ96BU1 408 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 SPACA9Q96E40 222 aaPredicted RBP6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 AGPAT1Q99943 283 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 RBM4BQ9BQ04 359 aaKnown RBP6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 GORASP1Q9BQQ3 440 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 TACO1Q9BSH4 297 aaKnown RBP6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 OR8D2Q9GZM6 311 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 CFAP45Q9UL16 551 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 PROCRQ9UNN8 238 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 SLC22A7Q9Y694 548 aa6.09□□□□□ -1.43
SCAMP1-206ENST00000618166 UBR4Q5T4S7 5183 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 LOC105371242A0A075B767 164 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 H7C417 338 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 EIF3FO00303 357 aaPredicted RBP6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 SCAMP2O15127 329 aaKnown RBP6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 EMC8O43402 210 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 KIF5CO60282 957 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 CLDN9O95484 217 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 CRHP06850 196 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 OR56A5P0C7T3 313 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 ZNF888P0CJ79 500 aaPredicted RBP6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 ERGP11308 486 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 OMGP23515 440 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 TTKP33981 857 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 GGT5P36269 586 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 LHX2P50458 406 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 DVL1P1P54792 670 aaPredicted RBP6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 RELAQ04206 551 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 WASHC5Q12768 1159 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 CCNIQ14094 377 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 ZSWIM7Q19AV6 140 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 LEG1Q6P5S2 330 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 TTC23LQ6PF05 361 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 SHQ1Q6PI26 577 aaKnown RBP6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 PACS1Q6VY07 963 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 TMEM64Q6YI46 380 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 ASPGQ86U10 573 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 RAB42Q8N4Z0 105 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 PPHLN1Q8NEY8 458 aaKnown RBP6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 FAM110DQ8TAY7 271 aaPredicted RBP6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 PTPMT1Q8WUK0 201 aaPredicted RBP6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 SLC13A3Q8WWT9 602 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 SMPDL3AQ92484 453 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 RILPQ96NA2 401 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 SNX18Q96RF0 628 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 LPAR2Q9HBW0 351 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 PRDM7Q9NQW5 492 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 CBLN4Q9NTU7 201 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 FAIMQ9NVQ4 179 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 SPATA7Q9P0W8 599 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 SPEF1Q9Y4P9 236 aa6.08□□□□□ -1.44
SCAMP1-206ENST00000618166 KCNE1BA0A087WTH5 132 aa6.07□□□□□ -1.44
SCAMP1-206ENST00000618166 C5orf60A6NFR6 353 aa6.07□□□□□ -1.44
SCAMP1-206ENST00000618166 SLC22A20A6NK97 555 aa6.07□□□□□ -1.44
SCAMP1-206ENST00000618166 C4orf51C9J302 202 aa6.07□□□□□ -1.44
SCAMP1-206ENST00000618166 E7EQL1 145 aa6.07□□□□□ -1.44
SCAMP1-206ENST00000618166 H0YC42 278 aa6.07□□□□□ -1.44
SCAMP1-206ENST00000618166 M0QZ24 198 aa6.07□□□□□ -1.44
SCAMP1-206ENST00000618166 NRDCO43847 1150 aa6.07□□□□□ -1.44
SCAMP1-206ENST00000618166 HOXA5P20719 270 aa6.07□□□□□ -1.44
SCAMP1-206ENST00000618166 TCEA1P23193 301 aaKnown RBP6.07□□□□□ -1.44
SCAMP1-206ENST00000618166 CHMP24386 653 aa6.07□□□□□ -1.44
SCAMP1-206ENST00000618166 MGAT1P26572 445 aa6.07□□□□□ -1.44
SCAMP1-206ENST00000618166 AOAHP28039 575 aa6.07□□□□□ -1.44
SCAMP1-206ENST00000618166 GRK3P35626 688 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms