RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 TRIM64CA6NLI5 447 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 BCKDKO14874 412 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 ADAMDEC1O15204 470 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 SLC16A6O15403 523 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 ITGAMP11215 1152 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 CD247P20963 164 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 CD38P28907 300 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 CDH12P55289 794 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 OLR1P78380 273 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 TNFRSF17Q02223 184 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 SIM2Q14190 667 aaPredicted RBP16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 MEP1AQ16819 746 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 CTU2Q2VPK5 515 aaKnown RBP16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 FAHD1Q6P587 224 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 OLIG3Q7RTU3 272 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 OOSP2Q86WS3 158 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 TMEFF1Q8IYR6 380 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 FAM174AQ8TBP5 190 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 SFXN5Q8TD22 340 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 RERGQ96A58 199 aaPredicted RBP16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 C10orf90Q96M02 699 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 SERINC2Q96SA4 455 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 CSF3RQ99062 836 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 YTHDF1Q9BYJ9 559 aaKnown RBP16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 RBM38Q9H0Z9 239 aaKnown RBP16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 ANKRA2Q9H9E1 313 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 KRT84Q9NSB2 600 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 P2RX2Q9UBL9 471 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 ZNF780BQ9Y6R6 833 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 CCDC88CQ9P219 2028 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 VILLO15195 856 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 MFN2O95140 757 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 CPN2P22792 545 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 MPIP34949 423 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 BUD31P41223 144 aaPredicted RBP16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 LASP1Q14847 261 aaKnown RBP16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 LTB4RQ15722 352 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 C11orf91Q3C1V1 193 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 ZNF691Q5VV52 312 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 RNF44Q7L0R7 432 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 PRSS41Q7RTY9 318 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 GPR32P1Q8NGA4 272 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 TSC22D3Q99576 134 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 ROGDIQ9GZN7 287 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 MIR1-1HGQ9H1L0 117 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 WNT16Q9UBV4 365 aa16.35■□□□□ 0.21
PCDHGC3-205ENST00000617641 URADA6NGE7 173 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 B3GALT2O43825 422 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 JRKO75564 520 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 CSF2P04141 144 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 HMGN2P05204 90 aaKnown RBP16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 ETS2P15036 469 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 ITGA2P17301 1181 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 FUT4P22083 530 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 MC3RP41968 323 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 XCR1P46094 333 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 KHKP50053 298 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 LIM2P55344 173 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 CD47Q08722 323 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 RAPSNQ13702 412 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 PUM1Q14671 1186 aaKnown RBP eCLIP16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 ABHD13Q7L211 337 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 SHISA5Q8N114 240 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 CHDHQ8NE62 594 aaPredicted RBP16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 OR4C15Q8NGM1 316 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 C16orf58Q96GQ5 468 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 TREX2Q9BQ50 279 aaPredicted RBP16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 ADNPQ9H2P0 1102 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 PHF11Q9UIL8 331 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 TMEM247A6NEH6 219 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 CCDC160A6NGH7 325 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 HCRTR1O43613 425 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 FESP07332 822 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 NR2F1P10589 423 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 CLK3P49761 638 aaKnown RBP16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 RPL6Q02878 288 aaKnown RBP16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 CEBPEQ15744 281 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 ARMC6Q6NXE6 501 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 LMX1AQ8TE12 382 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 KAT2AQ92830 837 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 DGCR14Q96DF8 476 aaKnown RBP16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 SHDQ96IW2 340 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 COL21A1Q96P44 957 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 PSME2Q9UL46 239 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 ENPP4Q9Y6X5 453 aa16.34■□□□□ 0.21
PCDHGC3-205ENST00000617641 DNAJB5O75953 348 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 FHP07954 510 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 FOSL2P15408 326 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 NME1P15531 152 aaKnown RBP16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 ST6GAL1P15907 406 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 ALOX12P18054 663 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 EPHA2P29317 976 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 HLCSP50747 726 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 ISL1P61371 349 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 SIM1P81133 766 aaPredicted RBP16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 RELAQ04206 551 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 FOXD4Q12950 439 aaPredicted RBP16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 GANABQ14697 944 aaKnown RBP16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 EXOC3L2Q2M3D2 409 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 LAIR2Q6ISS4 152 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms