RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 TMEM175Q9BSA9 504 aa13.36□□□□□ -0.27
TNFRSF11A-205ENST00000616710 SLC43A1O75387 559 aa13.36□□□□□ -0.27
TNFRSF11A-205ENST00000616710 TGFB1P01137 390 aa13.36□□□□□ -0.27
TNFRSF11A-205ENST00000616710 ACVR1BP36896 505 aa13.36□□□□□ -0.27
TNFRSF11A-205ENST00000616710 SLC5A12Q1EHB4 618 aa13.36□□□□□ -0.27
TNFRSF11A-205ENST00000616710 BEX5Q5H9J7 111 aa13.36□□□□□ -0.27
TNFRSF11A-205ENST00000616710 SFRP5Q5T4F7 317 aa13.36□□□□□ -0.27
TNFRSF11A-205ENST00000616710 TRILQ7L0X0 811 aa13.36□□□□□ -0.27
TNFRSF11A-205ENST00000616710 NLRC3Q7RTR2 1065 aa13.36□□□□□ -0.27
TNFRSF11A-205ENST00000616710 PRSS45Q7RTY3 260 aa13.36□□□□□ -0.27
TNFRSF11A-205ENST00000616710 OR10H4Q8NGA5 316 aa13.36□□□□□ -0.27
TNFRSF11A-205ENST00000616710 OR4F15Q8NGB8 312 aa13.36□□□□□ -0.27
TNFRSF11A-205ENST00000616710 TADA1Q96BN2 335 aa13.36□□□□□ -0.27
TNFRSF11A-205ENST00000616710 TRIM43Q96BQ3 446 aaPredicted RBP13.36□□□□□ -0.27
TNFRSF11A-205ENST00000616710 IMP3Q9NV31 184 aaKnown RBP13.36□□□□□ -0.27
TNFRSF11A-205ENST00000616710 ANGPT4Q9Y264 503 aa13.36□□□□□ -0.27
TNFRSF11A-205ENST00000616710 ADAMTSL1Q8N6G6 1762 aa13.36□□□□□ -0.27
TNFRSF11A-205ENST00000616710 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 HYKKA2RU49 373 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 ZNF98A6NK75 572 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 SRPRAP08240 638 aaKnown RBP13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 CLTBP09497 229 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 RHOQP17081 205 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 CBX5P45973 191 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 MAPKAPK2P49137 400 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 SELENOWP63302 87 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 SRSF11Q05519 484 aaKnown RBP13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 IHHQ14623 411 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 COL28A1Q2UY09 1125 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 TCTE1Q5JU00 501 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 CTSL3PQ5NE16 218 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 HSDL2Q6YN16 418 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 SYT9Q86SS6 491 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 OR51G2Q8NGK0 314 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 OR8D4Q8NGM9 314 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 NANPQ8TBE9 248 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 TEX47Q8TBZ9 253 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 OR51V1Q9H2C8 321 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 CACNG2Q9Y698 323 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 A0A0G2JN53 185 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 MROH6A6NGR9 719 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 SLC28A2O43868 658 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 PVALBP20472 110 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 ETV5P41161 510 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 MC1RQ01726 317 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 MEF2AQ02078 507 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 C18orf63Q68DL7 685 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 ZNF730Q6ZMV8 503 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 IQCHQ86VS3 1027 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 TMEM40Q8WWA1 233 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 CPNE2Q96FN4 548 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 IFT22Q9H7X7 185 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 TEX10Q9NXF1 929 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 TTLL8A6PVC2 850 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 ECDO95905 644 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 PTGER3P43115 390 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 MCCD1P59942 119 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 CAMK1Q14012 370 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 SLC14A2Q15849 920 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 MS4A13Q5J8X5 152 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 KIAA1841Q6NSI8 718 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 FAM198BQ6UWH4 519 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 TMPRSS11BQ86T26 416 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 ARRDC2Q8TBH0 407 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 KCNJ9Q92806 393 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 PPCDCQ96CD2 204 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 PIP5K1AQ99755 562 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 POT1Q9NUX5 634 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 NLGN3Q9NZ94 848 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 VPS29Q9UBQ0 182 aa13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 FCF1Q9Y324 198 aaKnown RBP13.35□□□□□ -0.27
TNFRSF11A-205ENST00000616710 OR2AG2A6NM03 316 aa13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 INSIG1O15503 277 aa13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 RAB36O95755 333 aa13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 MRPL3P09001 348 aaKnown RBP13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 ELK1P19419 428 aa13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 POU3F2P20265 443 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 CRYBB2P43320 205 aa13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 SLC11A2P49281 568 aa13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 UBE2MP61081 183 aaKnown RBP13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 TIAL1Q01085 375 aaKnown RBP eCLIP13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 RGNQ15493 299 aa13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 TEAD4Q15561 434 aa13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 POM121L1PQ3SYA9 428 aa13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 FAM27D1Q5T7N8 215 aa13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 TAPT1Q6NXT6 567 aa13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 LRFN4Q6PJG9 635 aa13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 IKBIPQ70UQ0 350 aa13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 ATCAYQ86WG3 371 aa13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 NPAS3Q8IXF0 933 aa13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 SECISBP2Q96T21 854 aaKnown RBP13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 RASD1Q9Y272 281 aa13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 TRAPPC4Q9Y296 219 aa13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 PCDHB7Q9Y5E2 793 aa13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 PCDHGA2Q9Y5H1 932 aa13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 DNAH12Q6ZR08 3092 aa13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 UBE2QL1A1L167 161 aa13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 IL1AP01583 271 aa13.34□□□□□ -0.27
TNFRSF11A-205ENST00000616710 HLA-DPB1P04440 258 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms