RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 TRADDQ15628 312 aa19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 LIPJQ5W064 366 aa19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 CES4AQ5XG92 561 aa19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 MRM1Q6IN84 353 aaKnown RBP19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 RNF111Q6ZNA4 994 aa19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 SLC29A4Q7RTT9 530 aa19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 LRRC25Q8N386 305 aaPredicted RBP19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 FAM13CQ8NE31 585 aa19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 RHEBL1Q8TAI7 183 aa19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 PELOQ9BRX2 385 aaKnown RBP19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 WWTR1Q9GZV5 400 aa19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 SLC6A15Q9H2J7 730 aa19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 ACTR8Q9H981 624 aa19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 BOKQ9UMX3 212 aaPredicted RBP19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 UTP11Q9Y3A2 253 aaKnown RBP19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 ASB4Q9Y574 426 aa19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 PCDHGA11Q9Y5H2 935 aa19.12■□□□□ 0.65
TRAPPC3-208ENST00000616074 NF1P21359 2839 aa19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 ZNF469Q96JG9 3925 aaPredicted RBP19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 A0A0A6YYD5 115 aa19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 IQANK1A0A1B0GTG1 560 aa19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 A0A1W2PR48 441 aa19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 GLOD5A6NK44 160 aa19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 H0YIV9 168 aa19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 OR10H2O60403 315 aa19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 GPR75O95800 540 aa19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 CLPSP04118 112 aa19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 GFAPP14136 432 aa19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 PTX3P26022 381 aaPredicted RBP19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 BSGP35613 385 aa19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 DLX5P56178 289 aa19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 SLC37A1P57057 533 aa19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 CAV1Q03135 178 aa19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 TBL3Q12788 808 aaKnown RBP19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 PFKFB4Q16877 469 aa19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 ZDHHC24Q6UX98 284 aa19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 DND1Q8IYX4 353 aaKnown RBP19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 NRGNQ92686 78 aa19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 RIT1Q92963 219 aa19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 UCN3Q969E3 161 aa19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 SLC24A3Q9HC58 644 aa19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 LYARQ9NX58 379 aaKnown RBP19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 CNIH4Q9P003 139 aa19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 CNOT11Q9UKZ1 510 aaKnown RBP19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 L3MBTL1Q9Y468 752 aa19.11■□□□□ 0.65
TRAPPC3-208ENST00000616074 MTORP42345 2549 aa19.1■□□□□ 0.65
TRAPPC3-208ENST00000616074 A0A087X1B8 175 aa19.1■□□□□ 0.65
TRAPPC3-208ENST00000616074 ZWINTO95229 277 aa19.1■□□□□ 0.65
TRAPPC3-208ENST00000616074 C2P06681 752 aa19.1■□□□□ 0.65
TRAPPC3-208ENST00000616074 NR2F6P10588 404 aa19.1■□□□□ 0.65
TRAPPC3-208ENST00000616074 GABRA1P14867 456 aa19.1■□□□□ 0.65
TRAPPC3-208ENST00000616074 SERPINB3P29508 390 aa19.1■□□□□ 0.65
TRAPPC3-208ENST00000616074 ALDH18A1P54886 795 aaKnown RBP19.1■□□□□ 0.65
TRAPPC3-208ENST00000616074 PHEXP78562 749 aa19.1■□□□□ 0.65
TRAPPC3-208ENST00000616074 CPSF6Q16630 551 aaKnown RBP eCLIP19.1■□□□□ 0.65
TRAPPC3-208ENST00000616074 SLC25A35Q3KQZ1 300 aa19.1■□□□□ 0.65
TRAPPC3-208ENST00000616074 MROH9Q5TGP6 573 aa19.1■□□□□ 0.65
TRAPPC3-208ENST00000616074 REPS1Q96D71 796 aa19.1■□□□□ 0.65
TRAPPC3-208ENST00000616074 JSRP1Q96MG2 331 aaPredicted RBP19.1■□□□□ 0.65
TRAPPC3-208ENST00000616074 DDX31Q9H8H2 851 aaKnown RBP19.1■□□□□ 0.65
TRAPPC3-208ENST00000616074 ACKR4Q9NPB9 350 aa19.1■□□□□ 0.65
TRAPPC3-208ENST00000616074 SNX15Q9NRS6 342 aa19.1■□□□□ 0.65
TRAPPC3-208ENST00000616074 EXPH5Q8NEV8 1989 aa19.1■□□□□ 0.65
TRAPPC3-208ENST00000616074 A0A1W2PS29 197 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 HMX2A2RU54 273 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 OR6C76A6NM76 312 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 UGDHO60701 494 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 AIFM1O95831 613 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 FAM58BPP0C7Q3 252 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 NEK2P51955 445 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 ART1P52961 327 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 GUCY2DQ02846 1103 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 CUL3Q13618 768 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 GTF2H2Q13888 395 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 PCBP2Q15366 365 aaKnown RBP eCLIP19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 NTRK2Q16620 822 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 FAM83EQ2M2I3 478 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 RIPPLY2Q5TAB7 128 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 GTF2H2CQ6P1K8 395 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 CYP20A1Q6UW02 462 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 GOLGA7Q7Z5G4 137 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 WDR53Q7Z5U6 358 aaPredicted RBP19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 ULK2Q8IYT8 1036 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 NEIL3Q8TAT5 605 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 WDR20Q8TBZ3 569 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 MRRFQ96E11 262 aaKnown RBP19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 DOHHQ9BU89 302 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 RAB17Q9H0T7 212 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 IPPKQ9H8X2 491 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 QPCTLQ9NXS2 382 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 RNF11Q9Y3C5 154 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 ITPR3Q14573 2671 aa19.09■□□□□ 0.65
TRAPPC3-208ENST00000616074 SIX3O95343 332 aaPredicted RBP19.08■□□□□ 0.64
TRAPPC3-208ENST00000616074 GBAP04062 536 aa19.08■□□□□ 0.64
TRAPPC3-208ENST00000616074 CD1EP15812 388 aa19.08■□□□□ 0.64
TRAPPC3-208ENST00000616074 DNAJA1P31689 397 aaKnown RBP19.08■□□□□ 0.64
TRAPPC3-208ENST00000616074 GALNSP34059 522 aa19.08■□□□□ 0.64
TRAPPC3-208ENST00000616074 PIK3CGP48736 1102 aa19.08■□□□□ 0.64
TRAPPC3-208ENST00000616074 TRPC1P48995 793 aa19.08■□□□□ 0.64
TRAPPC3-208ENST00000616074 SNTB1Q13884 538 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms