RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 COL9A1P20849 921 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 TIE1P35590 1138 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 GRK3P35626 688 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 CCR9P51686 369 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 GLO1Q04760 184 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 LIPNQ5VXI9 398 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 PTRHD1Q6GMV3 140 aaKnown RBP8.39□□□□□ -1.07
VPS11-206ENST00000614944 PNCKQ6P2M8 343 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 ZCCHC12Q6PEW1 402 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 CYHR1Q6ZMK1 362 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 MFSD2AQ8NA29 543 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 ZSCAN1Q8NBB4 408 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 OR7A2PQ8NGA2 310 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 NR4A3Q92570 626 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 KCNA7Q96RP8 456 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 GPR21Q99679 349 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 GSDMCQ9BYG8 508 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 YTHDF1Q9BYJ9 559 aaKnown RBP8.39□□□□□ -1.07
VPS11-206ENST00000614944 ACPTQ9BZG2 426 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 FBXL12Q9NXK8 326 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 SESN1Q9Y6P5 492 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 MEIOCA2RUB1 952 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 SAC3D1A6NKF1 404 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 LDLRAD4O15165 306 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 OR1I1O60431 355 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 CA5AP35218 305 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 RPIAP49247 311 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 HLCSP50747 726 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 KCNK10P57789 538 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 LDB1Q86U70 411 aaPredicted RBP8.39□□□□□ -1.07
VPS11-206ENST00000614944 HDDC3Q8N4P3 179 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 TXNDC5Q8NBS9 432 aaKnown RBP8.39□□□□□ -1.07
VPS11-206ENST00000614944 SFT2D1Q8WV19 159 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 RTKNQ9BST9 563 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 LHPPQ9H008 270 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 ZNF639Q9UID6 485 aa8.39□□□□□ -1.07
VPS11-206ENST00000614944 LRP4O75096 1905 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 UBA6A0AVT1 1052 aaPredicted RBP8.38□□□□□ -1.07
VPS11-206ENST00000614944 POM121BA6NF01 834 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 NCF1BA6NI72 391 aaPredicted RBP8.38□□□□□ -1.07
VPS11-206ENST00000614944 PRR19A6NJB7 356 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 NCF1CA8MVU1 366 aaPredicted RBP8.38□□□□□ -1.07
VPS11-206ENST00000614944 HSBP1L1C9JCN9 74 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 LATO43561 262 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 BNIP3LO60238 219 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 PRSS56P0CW18 603 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 GGT5P36269 586 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 CAPGP40121 348 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 NUMBP49757 651 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 PLA2G16P53816 162 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 ADPRHP54922 357 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 NME5P56597 212 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 GPR50Q13585 617 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 IRF4Q15306 451 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 POU4F3Q15319 338 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 PCBP2Q15366 365 aaKnown RBP eCLIP8.38□□□□□ -1.07
VPS11-206ENST00000614944 SLC25A25Q6KCM7 469 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 KIAA1211LQ6NV74 962 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 ZNF773Q6PK81 442 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 PAQR3Q6TCH7 311 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 PAGE2Q7Z2X7 111 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 HIPK1Q86Z02 1210 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 TCTE3Q8IZS6 198 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 CMTM5Q96DZ9 223 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 MRGPRX1Q96LB2 322 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 FUNDC2Q9BWH2 189 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 KCNH6Q9H252 994 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 LTB4R2Q9NPC1 389 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 KLHL1Q9NR64 748 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 RDH8Q9NYR8 311 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 XPR1Q9UBH6 696 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 MGAT4AQ9UM21 535 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 PRSS21Q9Y6M0 314 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 LOC100653049A0A140TA62 436 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 SLC5A10A0PJK1 596 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 GFYI3L273 518 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 KHNYNO15037 678 aaKnown RBP8.38□□□□□ -1.07
VPS11-206ENST00000614944 NARSO43776 548 aaKnown RBP8.38□□□□□ -1.07
VPS11-206ENST00000614944 DLX3O60479 287 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 KRT34O76011 436 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 SLC1A3P43003 542 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 C1orf185Q5T7R7 199 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 SLC27A4Q6P1M0 643 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 ZNF782Q6ZMW2 699 aaPredicted RBP8.38□□□□□ -1.07
VPS11-206ENST00000614944 ZBTB49Q6ZSB9 765 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 USP53Q70EK8 1073 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 NLRC3Q7RTR2 1065 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 C10orf107Q8IVU9 208 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 KYQ8NBH2 561 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 FAM83FQ8NEG4 500 aaPredicted RBP8.38□□□□□ -1.07
VPS11-206ENST00000614944 NXPE2Q96DL1 559 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 ZNF845Q96IR2 970 aaPredicted RBP8.38□□□□□ -1.07
VPS11-206ENST00000614944 DPEP2Q9H4A9 486 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 GPR27Q9NS67 375 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 EXD2Q9NVH0 621 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 BTNL2Q9UIR0 455 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 ELF5Q9UKW6 265 aaPredicted RBP8.38□□□□□ -1.07
VPS11-206ENST00000614944 PCDHB10Q9UN67 800 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 KCNK7Q9Y2U2 307 aa8.38□□□□□ -1.07
VPS11-206ENST00000614944 HS3ST3A1Q9Y663 406 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms