RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	C18orf63	Q68DL7	685 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	ZNF585A	Q6P3V2	769 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	SLC29A4	Q7RTT9	530 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	OR4N5	Q8IXE1	308 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	TEX9	Q8N6V9	391 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	L3MBTL4	Q8NA19	623 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	FBXO25	Q8TCJ0	367 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	FBF1	Q8TES7	1133 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	RIT1	Q92963	219 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	PPWD1	Q96BP3	646 aa	Known RBP	10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	REPS1	Q96D71	796 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	MTERF1	Q99551	399 aa	Known RBP	10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	ZNF559	Q9BR84	538 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	SORBS1	Q9BX66	1292 aa	Known RBP	10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	WWTR1	Q9GZV5	400 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	LYAR	Q9NX58	379 aa	Known RBP	10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	SPRR3	Q9UBC9	169 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	ACAD8	Q9UKU7	415 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	BOK	Q9UMX3	212 aa	Predicted RBP	10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	UTP11	Q9Y3A2	253 aa	Known RBP	10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	IKBKG	Q9Y6K9	419 aa		10.25	□□□□□ -0.77
CBWD1-222	ENST00000613508	IQANK1	A0A1B0GTG1	560 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508		A0A1W2PR48	441 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	HMX2	A2RU54	273 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	SH3BGRL	O75368	114 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	TRIM3	O75382	744 aa	Predicted RBP	10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	EED	O75530	441 aa	Known RBP	10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	SEMA3D	O95025	777 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	CLPS	P04118	112 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	C2	P06681	752 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	RFPL3S	P0C7P2	107 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	FAM58BP	P0C7Q3	252 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	SLC35E2	P0CK97	266 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	NR2F6	P10588	404 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	DLX5	P56178	289 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	RPS13	P62277	151 aa	Known RBP	10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	KCNJ2	P63252	427 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	PHEX	P78562	749 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	DDX39B	Q13838	428 aa	Known RBP	10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	EBP	Q15125	230 aa	Known RBP	10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	TBCEL	Q5QJ74	424 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	C10orf62	Q5T681	223 aa	Predicted RBP	10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	ZDHHC24	Q6UX98	284 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	RNF111	Q6ZNA4	994 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	ZNF572	Q7Z3I7	529 aa	Predicted RBP	10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	LIX1L	Q8IVB5	337 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	RNF175	Q8N4F7	328 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	ZNF441	Q8N8Z8	693 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	OR10G3	Q8NGC4	313 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	OR10Q1	Q8NGQ4	319 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	NEIL3	Q8TAT5	605 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	KCTD4	Q8WVF5	259 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	SREK1	Q8WXA9	508 aa	Known RBP	10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	TP53INP1	Q96A56	240 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	NXNL1	Q96CM4	212 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	NTNG2	Q96CW9	530 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	GPR78	Q96P69	363 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	SECISBP2	Q96T21	854 aa	Known RBP	10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	RAB17	Q9H0T7	212 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	LDAH	Q9H6V9	325 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	ACTR8	Q9H981	624 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	B4GALT7	Q9UBV7	327 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	CNOT11	Q9UKZ1	510 aa	Known RBP	10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	PYCARD	Q9ULZ3	195 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	L3MBTL1	Q9Y468	752 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	ANGPTL3	Q9Y5C1	460 aa		10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	TNPO3	Q9Y5L0	923 aa	Known RBP	10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	ZNF469	Q96JG9	3925 aa	Predicted RBP	10.24	□□□□□ -0.77
CBWD1-222	ENST00000613508	MED13L	Q71F56	2210 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	TMPRSS11D	O60235	418 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	OR10H2	O60403	315 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	KLHL2	O95198	593 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	PEX19	P40855	299 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	HERVK_113	P63132	956 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	ERVK-8	P63133	956 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	ZNF267	Q14586	743 aa	Predicted RBP	10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	PFKFB4	Q16877	469 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	FBXL19-AS1	Q494R0	122 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	NUDT13	Q86X67	352 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	ULK2	Q8IYT8	1036 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	TAGAP	Q8N103	731 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	FAM13C	Q8NE31	585 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	C17orf47	Q8NEP4	570 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	WDR20	Q8TBZ3	569 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	CNPPD1	Q9BV87	410 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	ERVK-6	Q9BXR3	956 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	IPPK	Q9H8X2	491 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	WDR41	Q9HAD4	459 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	CXorf21	Q9HAI6	301 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	SNX15	Q9NRS6	342 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	ERVK-19	Q9WJR5	959 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	EML6	Q6ZMW3	1958 aa		10.23	□□□□□ -0.77
CBWD1-222	ENST00000613508	FAM221A	A4D161	298 aa		10.22	□□□□□ -0.77
CBWD1-222	ENST00000613508	WASHC1	A8K0Z3	465 aa		10.22	□□□□□ -0.77
CBWD1-222	ENST00000613508	HSPB2	A8KAH6	182 aa		10.22	□□□□□ -0.77
CBWD1-222	ENST00000613508	CAPN14	A8MX76	684 aa		10.22	□□□□□ -0.77
CBWD1-222	ENST00000613508	AHRR	A9YTQ3	701 aa		10.22	□□□□□ -0.77
CBWD1-222	ENST00000613508	SYT5	O00445	386 aa		10.22	□□□□□ -0.77
CBWD1-222	ENST00000613508	PRKRA	O75569	313 aa	Known RBP	10.22	□□□□□ -0.77
CBWD1-222	ENST00000613508	CTAG2	O75638	210 aa		10.22	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms