RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 SLC35F4A4IF30 521 aa19.27■□□□□ 0.68
CTDP1-208ENST00000613122 DISC1C4P0D8 188 aa19.27■□□□□ 0.68
CTDP1-208ENST00000613122 IRF2P14316 349 aa19.27■□□□□ 0.68
CTDP1-208ENST00000613122 CST5P28325 142 aaPredicted RBP19.27■□□□□ 0.68
CTDP1-208ENST00000613122 GGT2P36268 569 aa19.27■□□□□ 0.68
CTDP1-208ENST00000613122 DPP6P42658 865 aa19.27■□□□□ 0.68
CTDP1-208ENST00000613122 TMEM130Q8N3G9 435 aa19.27■□□□□ 0.68
CTDP1-208ENST00000613122 CPXM2Q8N436 756 aa19.27■□□□□ 0.68
CTDP1-208ENST00000613122 RADILQ96JH8 1075 aa19.27■□□□□ 0.68
CTDP1-208ENST00000613122 NR0B1P51843 470 aaKnown RBP19.27■□□□□ 0.67
CTDP1-208ENST00000613122 WSCD2Q2TBF2 565 aa19.27■□□□□ 0.67
CTDP1-208ENST00000613122 UBE2Q1Q7Z7E8 422 aa19.27■□□□□ 0.67
CTDP1-208ENST00000613122 SLC7A6OSQ96CW6 309 aaPredicted RBP19.27■□□□□ 0.67
CTDP1-208ENST00000613122 SLC5A7Q9GZV3 580 aa19.27■□□□□ 0.67
CTDP1-208ENST00000613122 AIG1Q9NVV5 245 aa19.27■□□□□ 0.67
CTDP1-208ENST00000613122 ZNF35P13682 527 aa19.27■□□□□ 0.67
CTDP1-208ENST00000613122 ITIH1P19827 911 aa19.27■□□□□ 0.67
CTDP1-208ENST00000613122 HTR3DQ70Z44 454 aa19.27■□□□□ 0.67
CTDP1-208ENST00000613122 GALNT15Q8N3T1 639 aa19.27■□□□□ 0.67
CTDP1-208ENST00000613122 FTCDNL1E5RQL4 147 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 POLR1CO15160 346 aaPredicted RBP19.26■□□□□ 0.67
CTDP1-208ENST00000613122 BRINP1O60477 761 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 VAMP1P23763 118 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 MEP1AQ16819 746 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 NKAPLQ5M9Q1 402 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 TAS1R1Q7RTX1 841 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 CRB3Q9BUF7 120 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 FKBP14Q9NWM8 211 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 LOC100509620A0A075B734 347 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 NPIPB15A6NHN6 443 aaPredicted RBP19.26■□□□□ 0.67
CTDP1-208ENST00000613122 TMX2-CTNND1H3BSU7 103 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 CER1O95813 267 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 HRGP04196 525 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 DCKP27707 260 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 GRK5P34947 590 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 CCSAPQ6IQ19 270 aaPredicted RBP19.26■□□□□ 0.67
CTDP1-208ENST00000613122 DPPA4Q7L190 304 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 SSX6Q7RTT6 188 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 SLC12A9Q9BXP2 914 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 FARSAQ9Y285 508 aaKnown RBP19.26■□□□□ 0.67
CTDP1-208ENST00000613122 SOCS2O14508 198 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 FLRT2O43155 660 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 RPS26P62854 115 aaKnown RBP19.26■□□□□ 0.67
CTDP1-208ENST00000613122 BTBD16Q32M84 506 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 FIZ1Q96SL8 496 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 DUSP23Q9BVJ7 150 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 TMEM14AQ9Y6G1 99 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 TBX10O75333 385 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 SOX2P48431 317 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 AP2S1P53680 142 aaPredicted RBP19.26■□□□□ 0.67
CTDP1-208ENST00000613122 SERTAD2Q14140 314 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 EXOC3L2Q2M3D2 409 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 MSANTD1Q6ZTZ1 278 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 DCP2Q8IU60 420 aaKnown RBP19.26■□□□□ 0.67
CTDP1-208ENST00000613122 FTMTQ8N4E7 242 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 OR5AR1Q8NGP9 310 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 FBXL8Q96CD0 374 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 ACTR10Q9NZ32 417 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 PTTG2Q9NZH5 202 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 ABCD2Q9UBJ2 740 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 ACTL7AQ9Y615 435 aa19.26■□□□□ 0.67
CTDP1-208ENST00000613122 S100A10P60903 97 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 ACTC1P68032 377 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 ACTA1P68133 377 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 OR6C4Q8NGE1 309 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 C16orf78Q8WTQ4 265 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 SRA1Q9HD15 236 aaKnown RBP19.25■□□□□ 0.67
CTDP1-208ENST00000613122 PCDH10Q9P2E7 1040 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 STOX2Q9P2F5 926 aaPredicted RBP19.25■□□□□ 0.67
CTDP1-208ENST00000613122 TMA7Q9Y2S6 64 aaKnown RBP19.25■□□□□ 0.67
CTDP1-208ENST00000613122 LRRC42Q9Y546 428 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 DOT1LQ8TEK3 1739 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 RCAN2Q14206 197 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 ZER1Q7Z7L7 766 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.25■□□□□ 0.67
CTDP1-208ENST00000613122 MAP3K3Q99759 626 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 A0A0J9YY10 115 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 E7ESA3 106 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 RAD51DO75771 328 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 S100A6P06703 90 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 CLDN10P78369 228 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 TMEM151BQ8IW70 566 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 ELP5Q8TE02 316 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 DPAGT1Q9H3H5 408 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 KANTRA0A1W2PQU2 76 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 HOXD8P13378 290 aaPredicted RBP19.25■□□□□ 0.67
CTDP1-208ENST00000613122 CLDN2P57739 230 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 BLMHQ13867 455 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 STEAP4Q687X5 459 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 BEND4Q6ZU67 534 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 FOXRED2Q8IWF2 684 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 TP53INP2Q8IXH6 220 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 IRF2BPLQ9H1B7 796 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 NANSQ9NR45 359 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 ERVK-18Q9QC07 812 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 DHDHQ9UQ10 334 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 TTLL8A6PVC2 850 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 CD72P21854 359 aa19.25■□□□□ 0.67
CTDP1-208ENST00000613122 RPS3P23396 243 aaKnown RBP eCLIP19.25■□□□□ 0.67
CTDP1-208ENST00000613122 AK4P27144 223 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms