RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 PELI2Q9HAT8 420 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 FBXO6Q9NRD1 293 aaPredicted RBP9.33□□□□□ -0.92
SSX3-204ENST00000612497 TMEM160Q9NX00 188 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 SYBUQ9NX95 663 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 TEX10Q9NXF1 929 aaPredicted RBP9.33□□□□□ -0.92
SSX3-204ENST00000612497 CLCF1Q9UBD9 225 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 DAPP1Q9UN19 280 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 MAD1L1Q9Y6D9 718 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 MALRD1Q5VYJ5 2156 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 MGAM2Q2M2H8 2515 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 IQANK1A0A1B0GTG1 560 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 TCRBV7S2A1N4TA0A589 114 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 LRIT2A6NDA9 550 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 CAPN14A8MX76 684 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 OVOL3O00110 214 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 HRKO00198 91 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 GNB5O14775 395 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 TGM6O95932 706 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 IGKV3-11P04433 115 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 TPM1P09493 284 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 TBXA2RP21731 343 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 CERS1P27544 350 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 CFPP27918 469 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 RGS4P49798 205 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 NAP1L1P55209 391 aaKnown RBP9.32□□□□□ -0.92
SSX3-204ENST00000612497 CASP9P55211 416 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 FBXW4P57775 412 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 SIRPAP78324 504 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 GPS1Q13098 491 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 KLF1Q13351 362 aaPredicted RBP9.32□□□□□ -0.92
SSX3-204ENST00000612497 RPS6KA2Q15349 733 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 TMEM249Q2WGJ8 235 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 KBTBD12Q3ZCT8 623 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 UBAP2Q5T6F2 1119 aaKnown RBP9.32□□□□□ -0.92
SSX3-204ENST00000612497 NXPE4Q6UWF7 544 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 C12orf54Q6X4T0 127 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 MILR1Q7Z6M3 343 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 DENND6AQ8IWF6 608 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 TRIM42Q8IWZ5 723 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 MYO1HQ8N1T3 1032 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 CCDC89Q8N998 374 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 SPPL2AQ8TCT8 520 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 DOK4Q8TEW6 326 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 CAVIN3Q969G5 261 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 PLPPR2Q96GM1 343 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 DGAT2Q96PD7 388 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 SERINC2Q96SA4 455 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 RHNO1Q9BSD3 238 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 G6PC3Q9BUM1 346 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 COPS7BQ9H9Q2 264 aaPredicted RBP9.32□□□□□ -0.92
SSX3-204ENST00000612497 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.32□□□□□ -0.92
SSX3-204ENST00000612497 FETUBQ9UGM5 382 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 TRMT6Q9UJA5 497 aaKnown RBP9.32□□□□□ -0.92
SSX3-204ENST00000612497 SOX13Q9UN79 622 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 LIPT1Q9Y234 373 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 EXPH5Q8NEV8 1989 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 SVEP1Q4LDE5 3571 aa9.32□□□□□ -0.92
SSX3-204ENST00000612497 FRG2CA6NGY1 282 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 AP3B1O00203 1094 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 PLOD2O00469 737 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 UBFD1O14562 309 aaKnown RBP9.31□□□□□ -0.92
SSX3-204ENST00000612497 GUCA1CO95843 209 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 IGHV4-39P01824 125 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 PGRP06401 933 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 TPM3P06753 285 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 CRHP06850 196 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 THBDP07204 575 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 PTPN6P29350 595 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 STARP49675 285 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 THOC5Q13769 683 aaKnown RBP9.31□□□□□ -0.92
SSX3-204ENST00000612497 TIGD3Q6B0B8 471 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 OR2A2Q6IF42 318 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 UGT3A1Q6NUS8 523 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 CASC4Q6P4E1 433 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 TRIM40Q6P9F5 258 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 DNM1P46Q6ZS02 220 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 OR4N5Q8IXE1 308 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 TAGAPQ8N103 731 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 ARIH2OSQ8N7S6 290 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 OR2L5Q8NG80 312 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 OR1J4Q8NGS1 313 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 OR14L1PQ8NHC6 308 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 PPWD1Q96BP3 646 aaKnown RBP9.31□□□□□ -0.92
SSX3-204ENST00000612497 REPS1Q96D71 796 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 RBM18Q96H35 190 aaKnown RBP9.31□□□□□ -0.92
SSX3-204ENST00000612497 FBXL20Q96IG2 436 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 HS6ST2Q96MM7 605 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 TRIM54Q9BYV2 358 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 REXO4Q9GZR2 422 aaKnown RBP9.31□□□□□ -0.92
SSX3-204ENST00000612497 WWTR1Q9GZV5 400 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 PAK5Q9P286 719 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 COMMD10Q9Y6G5 202 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 TENM1Q9UKZ4 2725 aa9.31□□□□□ -0.92
SSX3-204ENST00000612497 CDC7O00311 574 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 LIASO43766 372 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 NDUFS7O75251 213 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 H2AFYO75367 372 aaKnown RBP9.3□□□□□ -0.92
SSX3-204ENST00000612497 SOD3P08294 240 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 ZSCAN5DPP0CG00 497 aa9.3□□□□□ -0.92
SSX3-204ENST00000612497 CASP3P42574 277 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms