RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 SLC15A1P46059 708 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 LIMK1P53667 647 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 SNRPGP62308 76 aaKnown RBP16.31■□□□□ 0.2
NEK3-206ENST00000611833 PRKCDQ05655 676 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 TARDBPQ13148 414 aaKnown RBP eCLIP16.31■□□□□ 0.2
NEK3-206ENST00000611833 SYPL1Q16563 259 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 OR4C11Q6IEV9 310 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 CYP4Z2PQ8N1L4 340 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 LINC01555Q8NAE3 123 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 OR4D11Q8NGI4 311 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 ARMC5Q96C12 935 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 SLC35G5Q96KT7 338 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 NT5DC2Q9H857 520 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 ACSS1Q9NUB1 689 aaPredicted RBP16.31■□□□□ 0.2
NEK3-206ENST00000611833 UGT2A1Q9Y4X1 527 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 DOCK9Q9BZ29 2069 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 NUMA1Q14980 2115 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 KMOO15229 486 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 AQP9O43315 295 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 LCMT2O60294 686 aaKnown RBP16.31■□□□□ 0.2
NEK3-206ENST00000611833 UGT2B17O75795 530 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 DNTTP04053 509 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 SSR2P43308 183 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 GSTM5P46439 218 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 SLX4IPQ5VYV7 408 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 UBE3DQ7Z6J8 389 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 SLC34A3Q8N130 599 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 AMER3Q8N944 861 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 FAM83FQ8NEG4 500 aaPredicted RBP16.31■□□□□ 0.2
NEK3-206ENST00000611833 OR5D16Q8NGK9 328 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 KLHL6Q8WZ60 621 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 WFDC6Q9BQY6 131 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 PITHD1Q9GZP4 211 aaPredicted RBP16.31■□□□□ 0.2
NEK3-206ENST00000611833 NUAK2Q9H093 628 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 OR51I1Q9H343 314 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 OSGEPL1Q9H4B0 414 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 SERHL2Q9H4I8 314 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 SLC25A19Q9HC21 320 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 CPNE5Q9HCH3 593 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 MBNL1Q9NR56 388 aaKnown RBP16.31■□□□□ 0.2
NEK3-206ENST00000611833 THAP10Q9P2Z0 257 aaPredicted RBP16.31■□□□□ 0.2
NEK3-206ENST00000611833 CFL2Q9Y281 166 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 WDR37Q9Y2I8 494 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 OR1A2Q9Y585 309 aa16.31■□□□□ 0.2
NEK3-206ENST00000611833 DLGAP3O95886 979 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 ALOX12P18054 663 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 GTF2E2P29084 291 aaKnown RBP16.3■□□□□ 0.2
NEK3-206ENST00000611833 PPP2R1BP30154 601 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 CSTF2P33240 577 aaKnown RBP eCLIP16.3■□□□□ 0.2
NEK3-206ENST00000611833 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.3■□□□□ 0.2
NEK3-206ENST00000611833 CDC20Q12834 499 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 PGBD2Q6P3X8 592 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 PSRC1Q6PGN9 363 aaPredicted RBP16.3■□□□□ 0.2
NEK3-206ENST00000611833 ATCAYQ86WG3 371 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 KRT73Q86Y46 540 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 PHOSPHO2Q8TCD6 241 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 C17orf62Q9BQA9 187 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 DPH7Q9BTV6 452 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 DDX31Q9H8H2 851 aaKnown RBP16.3■□□□□ 0.2
NEK3-206ENST00000611833 EXOSC4Q9NPD3 245 aaKnown RBP16.3■□□□□ 0.2
NEK3-206ENST00000611833 INIPQ9NRY2 104 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 ADAM29Q9UKF5 820 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 DNMT3AQ9Y6K1 912 aaPredicted RBP16.3■□□□□ 0.2
NEK3-206ENST00000611833 NINQ8N4C6 2090 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 MID1O15344 667 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 CKMT1AP12532 417 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 TNNI3P19429 210 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 TMED10P49755 219 aaKnown RBP16.3■□□□□ 0.2
NEK3-206ENST00000611833 CSNK1G2P78368 415 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 PIN1Q13526 163 aaPredicted RBP16.3■□□□□ 0.2
NEK3-206ENST00000611833 NDUFAF5Q5TEU4 345 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 SLC7A13Q8TCU3 470 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 HERVK_113Q902F9 699 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 TMEM80Q96HE8 168 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 DHRS1Q96LJ7 313 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 C12orf66Q96MD2 445 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 KLHL25Q9H0H3 589 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 GLIPR2Q9H4G4 154 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 FZD3Q9NPG1 666 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 SACM1LQ9NTJ5 587 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 ZCCHC3Q9NUD5 404 aaKnown RBP16.3■□□□□ 0.2
NEK3-206ENST00000611833 QPCTLQ9NXS2 382 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 PRKAG2Q9UGJ0 569 aa16.3■□□□□ 0.2
NEK3-206ENST00000611833 PNMA8CA0A1B0GUJ8 204 aa16.29■□□□□ 0.2
NEK3-206ENST00000611833 M0R3H8 397 aa16.29■□□□□ 0.2
NEK3-206ENST00000611833 PPM1DO15297 605 aa16.29■□□□□ 0.2
NEK3-206ENST00000611833 TPST2O60704 377 aa16.29■□□□□ 0.2
NEK3-206ENST00000611833 NME6O75414 186 aaPredicted RBP16.29■□□□□ 0.2
NEK3-206ENST00000611833 PRKAG1P54619 331 aa16.29■□□□□ 0.2
NEK3-206ENST00000611833 RHAGQ02094 409 aa16.29■□□□□ 0.2
NEK3-206ENST00000611833 PDGFRLQ15198 375 aa16.29■□□□□ 0.2
NEK3-206ENST00000611833 SSX1Q16384 188 aa16.29■□□□□ 0.2
NEK3-206ENST00000611833 SPANXN2Q5MJ10 180 aa16.29■□□□□ 0.2
NEK3-206ENST00000611833 AGBL4Q5VU57 503 aa16.29■□□□□ 0.2
NEK3-206ENST00000611833 MEDAGQ5VYS4 303 aa16.29■□□□□ 0.2
NEK3-206ENST00000611833 C19orf48Q6RUI8 117 aa16.29■□□□□ 0.2
NEK3-206ENST00000611833 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.29■□□□□ 0.2
NEK3-206ENST00000611833 TCEANCQ8N8B7 351 aa16.29■□□□□ 0.2
NEK3-206ENST00000611833 TRNT1Q96Q11 434 aaKnown RBP16.29■□□□□ 0.2
NEK3-206ENST00000611833 KCNS3Q9BQ31 491 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms