RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 LRRC14BA6NHZ5 514 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 GLOD5A6NK44 160 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 OR10H2O60403 315 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 EEDO75530 441 aaKnown RBP12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 LRATO95237 230 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 FBXO45P0C2W1 286 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 SERPINB3P29508 390 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 DNAJA1P31689 397 aaKnown RBP12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 BSGP35613 385 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 TRPC1P48995 793 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 ARFIP1P53367 373 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 SLC37A1P57057 533 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 IRF9Q00978 393 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 C2orf54Q08AI8 447 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 SNTB1Q13884 538 aaKnown RBP12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 TRADDQ15628 312 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 PFKFB4Q16877 469 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 SPRED3Q2MJR0 410 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 SLC25A35Q3KQZ1 300 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 RIPPLY2Q5TAB7 128 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 MRM1Q6IN84 353 aaKnown RBP12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 ARSKQ6UWY0 536 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 WDR53Q7Z5U6 358 aaPredicted RBP12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 DND1Q8IYX4 353 aaKnown RBP12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 CENPLQ8N0S6 344 aaPredicted RBP12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 LRRC25Q8N386 305 aaPredicted RBP12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 FBXW8Q8N3Y1 598 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 MYRIPQ8NFW9 859 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 OR10G3Q8NGC4 313 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 RHEBL1Q8TAI7 183 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 NEIL3Q8TAT5 605 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 RIT1Q92963 219 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 PELOQ9BRX2 385 aaKnown RBP12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 ZNF717Q9BY31 904 aaPredicted RBP12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 WWTR1Q9GZV5 400 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 SLC6A15Q9H2J7 730 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 ZNF703Q9H7S9 590 aaPredicted RBP12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 ACTR8Q9H981 624 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 ACKR4Q9NPB9 350 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 LYARQ9NX58 379 aaKnown RBP12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 QPCTLQ9NXS2 382 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 L3MBTL1Q9Y468 752 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 CHCHD2Q9Y6H1 151 aaPredicted RBP12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 MTORP42345 2549 aa12.31□□□□□ -0.44
POLR2J3-219ENST00000608621 LRRC3CA6NJW4 275 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 SYCE1LA8MT33 242 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 FAM47E-STBD1D6RA91 191 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 H0YIV9 168 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 TMPRSS11DO60235 418 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 C2P06681 752 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 FAM58BPP0C7Q3 252 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 GFAPP14136 432 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 NEK2P51955 445 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 IST1P53990 364 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 PHEXP78562 749 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 CAV1Q03135 178 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 SETDB1Q15047 1291 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 EBPQ15125 230 aaKnown RBP12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 NTRK2Q16620 822 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 CPSF6Q16630 551 aaKnown RBP eCLIP12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 FAM83EQ2M2I3 478 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 TMEM198Q66K66 360 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 CYP20A1Q6UW02 462 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 TMEM64Q6YI46 380 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 ZZZ3Q8IYH5 903 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 ULK2Q8IYT8 1036 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 LIX1Q8N485 282 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 FBXO25Q8TCJ0 367 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 MRRFQ96E11 262 aaKnown RBP12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 DOHHQ9BU89 302 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 DDX31Q9H8H2 851 aaKnown RBP12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 DNAJB12Q9NXW2 375 aaKnown RBP12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 CNOT11Q9UKZ1 510 aaKnown RBP12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 PYCARDQ9ULZ3 195 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 UTP11Q9Y3A2 253 aaKnown RBP12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 RNF11Q9Y3C5 154 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 PCDHGB3Q9Y5G1 929 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 ARHGAP21Q5T5U3 1957 aa12.3□□□□□ -0.44
POLR2J3-219ENST00000608621 PRRC2AP48634 2157 aaKnown RBP12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 ITPR3Q14573 2671 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 A0A087X1B8 175 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 A0A0A6YYD5 115 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 C2orf92A0A1B0GVN3 265 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 OR6C76A6NM76 312 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 PGRMC2O15173 223 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 CTAG2O75638 210 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 GBAP04062 536 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 CLPSP04118 112 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 SLC35E2P0CK97 266 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 STX2P32856 288 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 GALNSP34059 522 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 PIK3CGP48736 1102 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 ALDH18A1P54886 795 aaKnown RBP12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 GUCY2DQ02846 1103 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 NAB1Q13506 487 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 CUL3Q13618 768 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 GTF2H2Q13888 395 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 ACAP2Q15057 778 aa12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 PCBP2Q15366 365 aaKnown RBP eCLIP12.29□□□□□ -0.44
POLR2J3-219ENST00000608621 MROH9Q5TGP6 573 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms