RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 MYOTQ9UBF9 498 aa13.38□□□□□ -0.27
TUBE1-208ENST00000604743 OSGIN2Q9Y236 505 aa13.38□□□□□ -0.27
TUBE1-208ENST00000604743 FIS1Q9Y3D6 152 aa13.38□□□□□ -0.27
TUBE1-208ENST00000604743 PCDHGB6Q9Y5F9 930 aa13.38□□□□□ -0.27
TUBE1-208ENST00000604743 PCDHA9Q9Y5H5 950 aa13.38□□□□□ -0.27
TUBE1-208ENST00000604743 GTF3C1Q12789 2109 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 POLEQ07864 2286 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 GNG14A0A1W2PPG7 69 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 C1orf226A1L170 272 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 PCDH7O60245 1069 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 NME2P1O60361 137 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 TRIM13O60858 407 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 WISP2O76076 250 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 SLC35E2P0CK97 266 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 NT5EP21589 574 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 NME2P22392 152 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 FEN1P39748 380 aaKnown RBP13.37□□□□□ -0.27
TUBE1-208ENST00000604743 SOX3P41225 446 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 TDGF1P3P51864 188 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 ALDH6A1Q02252 535 aaKnown RBP13.37□□□□□ -0.27
TUBE1-208ENST00000604743 ACSM2AQ08AH3 577 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 ASPHQ12797 758 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 ACSM2BQ68CK6 577 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 FAM180BQ6P0A1 224 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 GFRALQ6UXV0 394 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 RNF111Q6ZNA4 994 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 MDGA2Q7Z553 956 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 C9orf40Q8IXQ3 194 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 CPSF7Q8N684 471 aaKnown RBP13.37□□□□□ -0.27
TUBE1-208ENST00000604743 CDC26Q8NHZ8 85 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 GAL3ST4Q96RP7 486 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 RASL10BQ96S79 203 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 MECRQ9BV79 373 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 FAIM2Q9BWQ8 316 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 GATA5Q9BWX5 397 aaPredicted RBP13.37□□□□□ -0.27
TUBE1-208ENST00000604743 CENPHQ9H3R5 247 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 TRIM45Q9H8W5 580 aaPredicted RBP13.37□□□□□ -0.27
TUBE1-208ENST00000604743 TNFRSF12AQ9NP84 129 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 MKS1Q9NXB0 559 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 MCM8Q9UJA3 840 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 RAB21Q9UL25 225 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 MYO7BQ6PIF6 2116 aa13.37□□□□□ -0.27
TUBE1-208ENST00000604743 CLEC18AA5D8T8 446 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 NPIPA5E9PKD4 350 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 CDK2AP1O14519 115 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 OR6B1O95007 311 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 UNC5CO95185 931 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 IGKV3-11P04433 115 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 IL3P08700 152 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 CT62P0C5K7 136 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 PORP16435 677 aaPredicted RBP13.36□□□□□ -0.27
TUBE1-208ENST00000604743 ALDH3A1P30838 453 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 PTGER1P34995 402 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 RFC3P40938 356 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 MEOX1P50221 254 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 GPR85P60893 370 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 RAE1P78406 368 aaKnown RBP13.36□□□□□ -0.27
TUBE1-208ENST00000604743 ZNF844Q08AG5 666 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 SPRED3Q2MJR0 410 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 SPIN4Q56A73 249 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 C6orf163Q5TEZ5 329 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 CLEC6AQ6EIG7 209 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 SLC48A1Q6P1K1 146 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 CLEC18BQ6UXF7 455 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 SLC29A4Q7RTT9 530 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 GALNT12Q8IXK2 581 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 CLEC18CQ8NCF0 446 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 OR8K3Q8NH51 312 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 KLHL29Q96CT2 875 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 FBXL20Q96IG2 436 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 PFDN4Q9NQP4 134 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.36□□□□□ -0.27
TUBE1-208ENST00000604743 SEC14L3Q9UDX4 400 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 NPIPA1Q9UND3 350 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 DLGAP4Q9Y2H0 992 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 KLF13Q9Y2Y9 288 aaPredicted RBP13.36□□□□□ -0.27
TUBE1-208ENST00000604743 NINQ8N4C6 2090 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 PTPN13Q12923 2485 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 HECTD1Q9ULT8 2610 aa13.36□□□□□ -0.27
TUBE1-208ENST00000604743 ASH1LQ9NR48 2969 aaKnown RBP13.35□□□□□ -0.27
TUBE1-208ENST00000604743 SETXQ7Z333 2677 aaKnown RBP13.35□□□□□ -0.27
TUBE1-208ENST00000604743 H3BQF6 201 aa13.35□□□□□ -0.27
TUBE1-208ENST00000604743 RGS16O15492 202 aaPredicted RBP13.35□□□□□ -0.27
TUBE1-208ENST00000604743 ZNF354AO60765 605 aaPredicted RBP13.35□□□□□ -0.27
TUBE1-208ENST00000604743 UROSP10746 265 aa13.35□□□□□ -0.27
TUBE1-208ENST00000604743 CPMP14384 443 aa13.35□□□□□ -0.27
TUBE1-208ENST00000604743 SSTR4P31391 388 aa13.35□□□□□ -0.27
TUBE1-208ENST00000604743 TIA1P31483 386 aaKnown RBP eCLIP13.35□□□□□ -0.27
TUBE1-208ENST00000604743 TRA2BP62995 288 aaKnown RBP13.35□□□□□ -0.27
TUBE1-208ENST00000604743 SULF2Q8IWU5 870 aa13.35□□□□□ -0.27
TUBE1-208ENST00000604743 C16orf78Q8WTQ4 265 aa13.35□□□□□ -0.27
TUBE1-208ENST00000604743 FRMD6Q96NE9 622 aa13.35□□□□□ -0.27
TUBE1-208ENST00000604743 TMEM109Q9BVC6 243 aa13.35□□□□□ -0.27
TUBE1-208ENST00000604743 BRINP2Q9C0B6 783 aa13.35□□□□□ -0.27
TUBE1-208ENST00000604743 CXorf21Q9HAI6 301 aa13.35□□□□□ -0.27
TUBE1-208ENST00000604743 TIMMDC1Q9NPL8 285 aa13.35□□□□□ -0.27
TUBE1-208ENST00000604743 HEY2Q9UBP5 337 aa13.35□□□□□ -0.27
TUBE1-208ENST00000604743 ERRFI1Q9UJM3 462 aaPredicted RBP13.35□□□□□ -0.27
TUBE1-208ENST00000604743 CES1P1Q9UKY3 287 aa13.35□□□□□ -0.27
TUBE1-208ENST00000604743 PSME2Q9UL46 239 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms