RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 RNF26Q9BY78 433 aaPredicted RBP4.51□□□□□ -1.69
LINC01109-201ENST00000603837 ACTL8Q9H568 366 aa4.51□□□□□ -1.69
LINC01109-201ENST00000603837 KCNK12Q9HB15 430 aa4.51□□□□□ -1.69
LINC01109-201ENST00000603837 TLR9Q9NR96 1032 aa4.51□□□□□ -1.69
LINC01109-201ENST00000603837 SLCO1C1Q9NYB5 712 aa4.51□□□□□ -1.69
LINC01109-201ENST00000603837 MPP6Q9NZW5 540 aa4.51□□□□□ -1.69
LINC01109-201ENST00000603837 PURGQ9UJV8 347 aaKnown RBP4.51□□□□□ -1.69
LINC01109-201ENST00000603837 KCNK6Q9Y257 313 aa4.51□□□□□ -1.69
LINC01109-201ENST00000603837 CENPFP49454 3210 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 FAM149AA5PLN7 773 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 TMEM191CA6NGB0 347 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 FAM74A7A6NL05 159 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 CDC7O00311 574 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 EEF2KO00418 725 aaKnown RBP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 LRCH4O75427 683 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 SPARCP09486 303 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 AZGP1P25311 298 aaKnown RBP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 GJA4P35212 333 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 MMP12P39900 470 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 VIPR2P41587 438 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 CDH6P55285 790 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 SUMO3P55854 103 aaPredicted RBP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 CLDN8P56748 225 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 ADARB1P78563 741 aaKnown RBP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 FADDQ13158 208 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 PPIGQ13427 754 aaKnown RBP eCLIP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 ALCAMQ13740 583 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 MICAQ29983 383 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 FAM83EQ2M2I3 478 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 DPY19L1Q2PZI1 675 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 FAM74A3Q4VXF1 159 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 LRRC38Q5VT99 294 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 IRAK1BP1Q5VVH5 260 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 ZPBP2Q6X784 338 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 FAM92BQ6ZTR7 304 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 FAM183BPQ6ZVS7 135 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 CPNE8Q86YQ8 564 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 GPR137CQ8N3F9 429 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 C12orf45Q8N5I9 185 aaPredicted RBP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 EMC1Q8N766 993 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 ELP5Q8TE02 316 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 LGALS12Q96DT0 336 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 CELF6Q96J87 481 aaKnown RBP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 MUS81Q96NY9 551 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 NODALQ96S42 347 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 C11orf70Q9BRQ4 267 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 DPCDQ9BVM2 203 aaPredicted RBP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 FAM49AQ9H0Q0 323 aaPredicted RBP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 IKZF4Q9H2S9 585 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 ZNF576Q9H609 170 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 KAT8Q9H7Z6 458 aaKnown RBP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 SMURF2Q9HAU4 748 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 ABCB8Q9NUT2 735 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 TMEM184CQ9NVA4 438 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 TAS2R14Q9NYV8 317 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 BTNL2Q9UIR0 455 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 OAZ3Q9UMX2 235 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 BAZ2BQ9UIF8 2168 aaKnown RBP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 A0A1B0GW15 77 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 C17orf102A2RUQ5 167 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 PRAMEF27A3QJZ7 478 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 HELTA6NFD8 242 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 PRAMEF25A6NGN4 478 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 FBLL1A6NHQ2 334 aaKnown RBP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 EFCAB9A8MZ26 197 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 TMEM238C9JI98 176 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 F5H6K3 240 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 PRAMEF26H0Y7S4 382 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 SLC28A1O00337 649 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 POLRMTO00411 1230 aaKnown RBP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 TPST1O60507 370 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 HPGDSO60760 199 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 PRAMEF4O60810 478 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 PRAMEF11O60813 436 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 ATG12O94817 140 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 NSA2O95478 260 aaKnown RBP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 CXCL14O95715 111 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 MOCS2O96007 188 aaPredicted RBP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 HTR1AP08908 422 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 RAB3BP20337 219 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 PROZP22891 400 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 DGKAP23743 735 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 FASP25445 335 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 KLRC2P26717 231 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 ID1P41134 155 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 CDKN2CP42773 168 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 CEBPDP49716 269 aaPredicted RBP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 VEGFCP49767 419 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 ARSFP54793 590 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 NAPAP54920 295 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 MAZP56270 477 aaKnown RBP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 POU4F1Q01851 419 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 RIPPLY1Q0D2K3 151 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 FGFBP1Q14512 234 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 QPRTQ15274 297 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 HNRNPA1L2Q32P51 320 aaKnown RBP4.5□□□□□ -1.69
LINC01109-201ENST00000603837 TMEM35AQ53FP2 167 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 AKIRIN2Q53H80 203 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 PCID2Q5JVF3 399 aa4.5□□□□□ -1.69
LINC01109-201ENST00000603837 ZNF484Q5JVG2 852 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms